Conserved Protein Domain Family
SPFH_like_u3

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cd03406: SPFH_like_u3 
Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease and, in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.
Statistics
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PSSM-Id: 259804
Aligned: 22 rows
Threshold Bit Score: 465.232
Created: 4-Feb-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O94905    16 CASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSgGVMIYFDRIEVVNFL 95  human
AAD17426  40 VMFPSSLVHQVPEGHVGAYWRGGALLNIITEPGFHLKLPFITNYEPVQVTLQTDQVRDIPCGTKgGVLITFEKIEVVNRL 119 thale cress
ACN40257  43 DGHSLDIVHQVPEGHVGVYWRGGALLKTVTSPGFHLKMPLITRYEPIQVTIQTDKVKDIPCGTKgGVMIFFDKIEVVNRL 122 Sitka spruce
EDQ75510   4 AGTNLAILHQIPEGHVGVYWRGGALLNTISGPGFHLMIPFLTRVEPIQVTIQTDQVMNIPCGTKgGVMLEFAKIEVVNRL 83  Physcomitrella pate...
EDQ89429  66 SLTLFPSPFLSFPLLSLLPSIGGALLNAVSEPGYHVLIPFLTSVKQVQITMQKDEVRNVPCGTSgGVMIYFDRVEVVNIL 145 Monosiga brevicolli...
EFJ33983  37 AGTNFGVLHQIPEGHVGVYWRGGALLKTISEPGFHLMVPILTQYEPIQVTIQTDQVKDIPCGTKgGVMIYFEKIEVVNRL 116 Selaginella moellen...
EGD79511  17 LMVMQFGIHSVQEGYVAVYYRGGALLSTVNGPGYHIMLPFITSYRQIQVTLQTDEVTNVPCGTSgGVIVYFDRIEVVNIL 96  Salpingoeca sp. ATC...
EKX50527  16 AMFLQASIHKIHEGHVGVYYIGGRLLDAYTEAGYNVMFPFFTRVHEMQITIQTDEVTNIPCGTRgGVMITFEKVEVVNIL 95  Guillardia theta CC...
EFJ49641  47 ALFIKTAVHQIPEGHVGVYWRGGVLLHRTTSPGIRVRLPLLDTFEAIQTTMQTDRLTDILCGTKgGVTITFDNVEVVNRL 126 Volvox carteri f. n...
EIE22439  41 AVFLKFSLHSVPEGHVGVYWRGGSLLSRVTEPGLRLKLPFLDLFSPIQVTLQTDKVADIPCGTK-GVMVYFDKVEVVNRL 119 Coccomyxa sp. C-169
O94905    96 VPNAVYDIVKNYTaDYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNI 175 human
AAD17426 120 RKDFVYDTLLNYGvNYDNTWIYDKIHHEINQFCSSHSLQQVYIDIFDQIDERMKDALQADCTRYAPGIEILSVRVTKPKI 199 thale cress
ACN40257 123 RKEYVYDTLMNYGvTYDKTWIYDKIHHEINQFCSSHTLQEVYTDMFDQIDEQMKEAIQADCTRYAPGIEIIGVRVTKPTI 202 Sitka spruce
EDQ75510  84 RKNYVYETILNFGvHYDKTWIYDKIHHEINQFCSGHTLQEVYIDKFDQIDEMMKEAIQRDCTQYAPGIEIIGVRVTKPTI 163 Physcomitrella pate...
EDQ89429 146 DKEAVLDTVRRFTpSYDQPLIFDKVHHTLNQFCSVHTLQEVYVNQFDQIDENLKQDLEADLNKLAPGLQILAVRVTKPII 225 Monosiga brevicolli...
EFJ33983 117 KKELVYETILNYGvSYDKTWIYDKIHHEINQFCSAHSLQEVYIDKFDQIDEIMKDAIQRDCTRYAPGIEIIGVRVTKPTI 196 Selaginella moellen...
EGD79511  97 DVDHVHETVKKYTpDYDRALIFHKVHHELNQFCSAHTLQEVYTDFFDQIDENLRTALQTDLTVMAPGLKVLSVRVTKPRI 176 Salpingoeca sp. ATC...
EKX50527  96 DKNRVIQTVRNYGiDYDKIWIFDKIHHEINQFCSQHTLQDVYIEKFDTVDDRIKEALQRDCNTYDTGIRIIAVRVTKPKI 175 Guillardia theta CC...
EFJ49641 127 RRDLVYETIRDYGvQYDRIWIYDKARHEISQLCSSRTLEEVYITQFDQIEGQLKDALQADCNRYAPGIEIIAVRVSKPTI 206 Volvox carteri f. n...
EIE22439 120 KKEYVLETIRAYGeDYDNLWIFSKIHHEMNQLCSHSTLQDIYIDKFDQIDEILKDALQADCTKFAPGIEIFSVRVTKPRL 199 Coccomyxa sp. C-169
O94905   176 PEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREK 255 human
AAD17426 200 PESVRRNFEQMEEERTKVLIAIEKQRVAEKEAETKKIMAISEAEKNANVSKILMQQKLTEKDSSRREADIENQMYLDRQK 279 thale cress
ACN40257 203 PATIARNYERMEEERTKVLIAIEKQKVLEKEVETQKKMAVTEAEKDAHVSKIVMAQKLTEKESIKMQQEIENEMYLARER 282 Sitka spruce
EDQ75510 164 PHSIARNYEIMEEERTKVLIAVEKQKVAEKEAETLKKRAVTDAEKDAKVSEILMSQRVREKESIKRQQEIENEIFLAREK 243 Physcomitrella pate...
EDQ89429 226 PEAIRQNYEAMEAEKTMLLIAEQRQRVVEKEAETDRKRAVIEAQKAAEVKTIENEARIAEKEAEKKMSTLEDQIRLARAK 305 Monosiga brevicolli...
EFJ33983 197 PATIARNYESMEEERTKVLIAVERQKVLEKEAETHKKQAVTEAEKDAHVSKILMEQRVMEKESAKRQQEIENEIFLGREK 276 Selaginella moellen...
EGD79511 177 PDAIRNNYELMEAEKTKLLIAAQHQRVVEKEAETERKHAIILAEKNAEVARVNNQARIAEKEAEKKMASISNEMYLEKER 256 Salpingoeca sp. ATC...
EKX50527 176 PEIVRRNYEEMEAQKTQYMIAVEHQKVVEKQAETERRRLQIEAETAASVASIRKQQEIMEQEAAKNVSRIKDEMHIAREK 255 Guillardia theta CC...
EFJ49641 207 PQSVLDNYVAMEVERTRAMVALERQRVMEREAEAERIKEVSQARRVAETSAIQMQQLLAEKEAQRARAEIDNDIFLAQQK 286 Volvox carteri f. n...
EIE22439 200 PPAIEANYEAMEAERTRVGVARERALVVTQEAETEHRRAVMIAEKEAETSRIHMQQLLAERQAEQMRETIQNEMYLAKQR 279 Coccomyxa sp. C-169
O94905   256 AKADAECYTAMKIAEANKLKLTPEYLQLMKYKAIASNSKIYFGKDIPNMFMDS 308 human
AAD17426 280 SLADADYYRVLREAEANKLKLTPEFLELKFIDAIARNTKIFFGDKVPNMVLDQ 332 thale cress
ACN40257 283 SLADSYFYKVVKEAEANKLKLTPEYLELRFIEAIANNTKMFFGNKVPNMVFDQ 335 Sitka spruce
EDQ75510 244 SLADANFYRVMREADANKLKLTPEFLELKFIEAVGNNSKMFFGEKLPNIVLDQ 296 Physcomitrella patens subsp. patens
EDQ89429 306 GAVDAEYYQLTKQAEAEKARFTPEYLQALMYTSVANKTKIFFGPDIPSMFTWP 358 Monosiga brevicollis MX1
EFJ33983 277 SLADANFYRVLREAEANKLKLTPEFLELKFIESITNNSKIFFGDKVRILSLPN 329 Selaginella moellendorffii
EGD79511 257 AIVDAEFYAAKRNAEANQLRLTPQYLELMKYKAIANNTKVYFGPDLPTMFLSS 309 Salpingoeca sp. ATCC50818
EKX50527 256 AYADAEHYKLQQEAIANSKLLTKEYLELKRVQAISNLSKIYFGNSIPAMFSPL 308 Guillardia theta CCMP2712
EFJ49641 287 ARADAEKYRLEREAEGLRSKLTPQYLEYELIQALTNNTKIFVGDRLPSRLLLD 339 Volvox carteri f. nagariensis
EIE22439 280 MLADSDYYRTIREAEANKAKLTPEYIQVAFMQAIANNTKLYFGEKLPSILLDL 332 Coccomyxa sp. C-169
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