1DZR,2IXI,6NDR,1EP0,3RYK,1PM7


Conserved Protein Domain Family
RfbC

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COG1898: RfbC 
dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme [Cell wall/membrane/envelope biogenesis]
Statistics
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PSSM-Id: 441502
Aligned: 849 rows
Threshold Bit Score: 126.333
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1DZR_A         2 MIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEELigrKVTFVQDNHSKSKKNVLRGLHFQRgenAQGKLVRCAVGE 81 
WP_014080563   5 FEFEETEIKGLIKVTPFNADDIRGCFTKDYSKEVFEANg-iHHDLAEVFYTTSHKGVIRALHFQRe-kQQPKLVRCIYGH 82 
WP_013065203   5 FNFEELDLKGAYKIQPFYATDERGGFVKDYNIDMFKANg-iEHELKEVFYTISKRGVIRAMHFQLv-kQQAKLVRCVSGH 82 
WP_066074485   5 FEFQSTKIKDLYKIKIFHADDNRGGFSKDYSKEIFESQg-iDHQLQEVFYTNSYKGVIRALHFQRv-kQQPKLVRCIYGH 82 
WP_041914249   5 FEFQELGLKDAYFISNFYAGDNRGGFTKTFEKDMYKEAg-iDFSLHETFASTSMKNVIRGLHFQMr-nPQAKLVSVIAGA 82 
WP_128700943   1 MTVERTQLEGVLLIKPEAFRDFRGEYVEIYNEELYRKNg-iEVAFIQDDISMSYKNVLRGIHGDD---LTWKLISCLHGE 76 
WP_060689377   1 MQRQLTPLIDCFEFDIPSFTDPRGRLVKLYHQLSFKELg-iDKEVAEFYISESKKGVLRGLHFQIppyQHSKIVSCIKGA 79 
WP_126307107   2 YQLHKTKIDGCLELTPNIFNDHRGISIKPFHSDFFQTLg-vEHNFNEDLMVISHKGVLRGMHLQNpplQQAKLIYCASGS 80 
WP_069178962   5 FEFHNTEIEGLVLVVPFNADDNRGLFTKDYSKEIFEQNg-iKHELAEVFYTTSYKGVIRAIHFQRe-kQQPKLVRCIYGS 82 
WP_013380698   4 FSFETTPIRDLMIIHPFYMEDERGFFLKSFEKEIFWQNg-iKTEIFEDFESYSIKGVLRGLHFQTe-kPQAKLVRALTGT 81 
1DZR_A        82 VFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEyAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFS 161
WP_014080563  83 VYDVVVDLRKDSPTFKKWLGFDLIGEQHNEILVPAGCAHGYLVLEK-SIVSYKCGEKFYGEYDDGIMWNDPDIAVEWPLE 161
WP_013065203  83 VYDVIADLRPDSPTFGQWRGFHLTGDNQVELYIPQYFGHGYLVIED-SVVSYKCGEVFYGEGDSGIMYNDPDLAIEWPMD 161
WP_066074485  83 VWDVVVDLRKESPTYMQWQSFDLYGNVYEEILVPGGCAHGYLVLEE-SIVSYKCSEKFYGEFDDGIIWNDRDIGVDWPLS 161
WP_041914249  83 VWDVIVDIRPDSPTYKQWMAEVLSADNHKSFYVPRGFAHGFLSLEDnTVMLYQCDGKYDKETDTGIMFNDPDIGIEWPIR 162
WP_128700943  77 FYLVVLNYDKSSPDFGKWQSFTLSDKNRHQVLVPPKFGNGHFVLSErAIFHYKQSTYYDPGKQFTVKWNDPRFNISWPVK 156
WP_060689377  80 IFDVMVDLREGSLTYGQAHSIVLRGDQPRAVFIPEGFAHGFVSLEEeSLFSCISSHVFEPKGDAGLRWD--SIAVDWPDI 157
WP_126307107  81 IFDVAVDVRKNSPTYGQHVAFYVDAVKHNIVYIPSGLAHGYLVLEDcTTVIYKMSSVYSPGLESGFRWD--SAAIPWPVQ 158
WP_069178962  83 IYDVVVDLRKDSPTFMKWLGFELTRENRMELIVPAGCGHGYLVLEE-SIVSYKCAEKFYGEYDDGILWNDKEIAINWPLN 161
WP_013380698  82 IYDVAVDLRKTSKTFGKWHAEILSVDNHKAFFIPKGFAHGFLVLSDnALVSYKCEGAFSKETDTGIVWNDPELKIDWPTN 161
1DZR_A       162 q-----LPELSAKDAAAPLLDQA 179
WP_014080563 162 kvgglgNVILADKDKNLQTFEQF 184
WP_013065203 162 liggeeKLIISEKDKNLMSFKDY 184
WP_066074485 162 liggeeNLILAEKDMKLQTFKEF 184
WP_041914249 163 e----qDAIHSQRDMLLMSIKEY 181
WP_128700943 157 ------DPILSKRDELGR--RG- 170
WP_060689377 158 ------PLNISEKDLEQPGLQDF 174
WP_126307107 159 ------NPILSDKDKSLPGFNDF 175
WP_069178962 162 riggikNIILSDKDKELNSFARF 184
WP_013380698 162 qv---dEIIVSEKDRRLQTFSHF 181
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