1CG7,1WXL,2CS1,1L8Y,1V63,1V64,3F27,1O4X,1J3D,1I11,1HRZ,2LEF,2EQZ,1QRV,1WGF,1K99


Conserved Protein Domain Family
HMG

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smart00398: HMG 
Click on image for an interactive view with Cn3D
high mobility group
Statistics
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PSSM-Id: 197700
Aligned: 94 rows
Threshold Bit Score: 27.2799
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1CG7_A        20 APKRALSAYMFFANENRDIVRSENPDIT--------FGQVGKKLGEKWKALTPEEKQPYEAKAQA-----DKKRyESEKE 86  baker's yeast
O42648       187 AKKATSNAKITDTMLFNHFSSIQKPKLKaegstlkgQALKKTLEDTWNNLTEEEKKPYHEGLLAA-----REKArEARRR 261 Schizosaccharom...
Q07053         6 PRRLAIGAYTLFMMEQKNNPKLKGLK----------IADRGKMTSKLYKALNPNDKAALEKRAAAhpgfkRKEKePKELK 75  Crithidia fasci...
NP_593259    187 AKKATSNAKITDTMLFNHFSSIQKPKLKaegs-tlkGQALKKTLEDTWNNLTEEEKKPYHEGLLA-----AREKaREARR 260 Schizosaccharom...
XP_001033066  13 PKKPFSNTYQAFVLEKKNALG---------------KNFDNKKVQADYNKLSNNEKERLQKLVDN-----AEEKyKEELF 72  Tetrahymena the...
EDL31954      28 KPKRPRSAYNIYVSES---FQEAKDDSA--------QGKLKLVNEAWKNLSPEEKQAYIQLAKDD-----RIRYdNEMKS 91  house mouse
CAH60727      92 KPKRPRSAYNVYVAER---FQEAKGDSP--------QEKLKTVKENWKNLSDSEKELYIQHAKED-----ETRYhNEMKS 155 pygmy chimpanzee
AAH42232     507 PKKAPMNGYQKFSQELLSNGELNHLP----------LKERMVEIGSRWHRISPTQKDYYKKLAED-----QQRLyRTQFD 571 African clawed ...
1V63_A         8 PKKPPMNGYQKFSQELLSNGELNHLP----------LKERMVEIGSRWQRISQSQKEHYKKLAEE-----QQRQyKVHLD 72  house mouse
1V64_A        17 PTKPPPNSYSLYCAELMANMKDVP------------STERMVLCSQQWKLLSQKEKDAYHKKCDQ-----KKKDyEVELL 79  house mouse
1CG7_A        87 LYN 89  baker's yeast
O42648       262 RSA 264 Schizosaccharomyces pombe 972h-
Q07053        76 AAK 78  Crithidia fasciculata
NP_593259    261 RRS 263 Schizosaccharomyces pombe 972h-
XP_001033066  73 HYN 75  Tetrahymena thermophila
EDL31954      92 WEE 94  house mouse
CAH60727     156 WEE 158 pygmy chimpanzee
AAH42232     572 TWM 574 African clawed frog
1V63_A        73 LWV 75  house mouse
1V64_A        80 RFL 82  house mouse
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