Conserved Protein Domain Family
SBP56

?
pfam05694: SBP56 
56kDa selenium binding protein (SBP56)
This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport. The Lotus japonicus homolog of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins, in vesicular Golgi transport.
Statistics
?
PSSM-Id: 461716
Aligned: 20 rows
Threshold Bit Score: 732.579
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q9VFZ4              6 CCRGPG-YATPLDAMrSGPREKLLYTVTVQPNLDephGDYLSTVDVDPESPTYCQIVHRTFTNRKGDELHHSGWNACSS- 83  fruit fly
Q569D5              5 gSCGPG-YKTPLDAM-KGPREEILYLPCIYRNTGinkPDYLATVDVNPKSPKYSQVIHRLPMPNTNDELHHSGWNTCSS- 81  tropical c...
Q8ZUL2              4 LKPDPTfYPTPRDAM-RAPPEDIAYVAALYVGTGvnaPDFLAVVDVDPKSPTYGKVIYKLDLPYIGDELHHFGWNACSSa 82  Pyrobaculu...
jgi:Msed_0967       7 FRRDPTfYPSPRMAM-NSPPEDLAYVASLYTGTGinrPDFLAVVDVNPKSETYSRIVGKVEMPNLNDELHHFGWNACSSs 85 
Q4JBV8             10 FKRDPTfYPSPKMAI-NSPPEDLAYVACLYVGTKinrPDYIAVVDVNPKSETYTKVVAKVELPYTGDELHHFGWNACSSs 88  Sulfolobus...
Q1AZ66              4 WRPDPTfYPSPKMAM-QAPRERLGYVALLDPGREr--PDALGVLDLDPDSGTYAQIVGRVEMPNAADELHHFGWNACSAa 80  Rubrobacte...
jgi:Franean1_5378 108 SNPDPTfYRSPGDAA-AAPPEQLAYVAAFDPKGAv--SDAMTVVDVDSTSSSYGRIVGWTDLSGRDDELHHFGWNACSSa 184
WP_009946310        7 HHTDPTfYRTPAEAI-AAPAEKLAYVVAFDRGAQr--PDALTAIGTDPESDGYGRVVGWTDLPTRGDELHHFGWNACSSs 83  Saccharopo...
WP_012403483        4 WKPDPTfYPSPRMAG-SAPKETVAYVASFDPSREs--PDELAVVDVDPSSADYGRIVSRVPMPNTGDELHHFGWNACSSc 80  Paraburkho...
Q01W20              3 WQPDPTfYPSPKMAM-EAPAEKLAYVAMLNPNVKk-gPDAMAVIDVDAESKSYGHMVGRADMPNAGDELHHFGWNACSSc 80  Candidatus...
Q9VFZ4             84 -CYyvDESSKtvpKRDRLVLPSLNSDFIYILDVVtDPRKPEIVKTIDG-DVLKsHNVTAPHTTHCLANGNIMISVMGDAE 161 fruit fly
Q569D5             82 -CY--GDASK---VRNKLILPCLISSRIYVVDVGtDPRAPRIHKTVEPyEVFWkCGLANLHTSHCLGCGEIMISSIGDPY 155 tropical c...
Q8ZUL2             83 yCPn-AKPFL---ERRYLIVPALRSSRIYIVDTKpDKRRPAVAKIVEPeVAVGrTGYTKYHTVHCGPDA-IYISALGGPD 157 Pyrobaculu...
jgi:Msed_0967      86 lCPn-GRTDL---ERRFLIVPGLRSSRIHVIDTKdNPRQPKIVKVVEPsEVSKvTGYTRLHTVHCGPDG-IYISAFGNEI 160
Q4JBV8             89 lCPn-GRPNV---ERRFLVVPGLRSSRIYIIDTKlDPRKPNIVKVIQPeEIKKvTGYSRLHTVHCGPDA-IYISALGNEV 163 Sulfolobus...
Q1AZ66             81 lCPyaPHPHV---ERRYLIVPGIRSSRIHIVDTKpDPREPRIVKVIEPeELHRrTGYSRPHTIHCGPDG-VYVSALGSPE 156 Rubrobacte...
jgi:Franean1_5378 185 lCHg-HHGHAanlERRYLVVPGLRSSRIHILDTRpDPRSPRVVRTIEAaELATkAGYSRPHTVHCGPHG-LYLSALGGAN 262
WP_009946310       84 iAHaeHHAGGl--HRRYLLLPGLRSSRIHVYDTHaDPARPALVRTIEAaELAErAGYSRPHTLHCGPTG-IYLSCLGGAN 160 Saccharopo...
WP_012403483       81 lCPnaPHPHT---ERRYLVVPGLRSSRIHILDTKpDKRKPQIARVLEPaEVAEkAGYTRPHTVHCGPQG-IYVVSLANAQ 156 Paraburkho...
Q01W20             81 lCPysPHPHM---ERRYLVVPGLRSSRIHILDTKpDPKNPKLVKVIEPeTVMNrTGYSRPHTVHCGPEG-IYMNALGSPN 156 Candidatus...
Q9VFZ4            162 G-YAKGDFILFDSD-FNCIGTWTKGDKKALCGYDFWYQPYFDVMVSSEWGAPNKWRRGWKNVDLEDMsQYGCRLNFYKWS 239 fruit fly
Q569D5            156 G-NGKGGFVLLDGEtFEVKGNWEAEGEAAPFGYDFWYQPRHNVMISTEWGAPKAFALGFKMEEVQAG-MYGHSLNVWDWT 233 tropical c...
Q8ZUL2            158 GrEGPGGIFLLDHDtFEPIGRWEVYRGPQYFAYDFWWNLPSGVMITSEWTVPRCFEEGFSLECLKEG-AYGNKLHVWDLA 236 Pyrobaculu...
jgi:Msed_0967     161 G-EGPGGILLLDHFtFEPLGKWEINRGDQYFAYDFWWNLPNEVMVTSEWAVPNTIEDGLRLEHLEKG--YGNRIHFWDLR 237
Q4JBV8            164 G-EEPGGILMLDHYsFEPLGKWEIYREDQKLSYDFWWNLPNEIMVTSEWATPTTIENGLNPEHLKEK--YGNRIHFWDLR 240 Sulfolobus...
Q1AZ66            157 G-DGPGGVFVMDHEsFDPLGRWEVERGPQQLAYDFWWHLGYDTMVTSEWGTPNMIEGGLDPQILLNK-GYGRRLHIWDLR 234 Rubrobacte...
jgi:Franean1_5378 263 GsDGPGGVALLDHDtFNVVGPWERDRGPQYLAYDVWWHLAQGVAVTSEWGTPSMIEDGVNAELLLGR-EYGHALHFWDLD 341
WP_009946310      161 GsDGPGGIAVLDHDtFDVVRAWETDRGPQHLAYDAWWHLNHNTLITSEWGTPSMIEDGLNPELLLGN-QYGHALHFWDLD 239 Saccharopo...
WP_012403483      157 G-EAPGGIFLMDHEtFDIRGQWEIDRGPQELSYDGWWHLGYDTVVTSEWGLPATFENGLVPEVLLGG-QYGHRLHFWDMN 234 Paraburkho...
Q01W20            157 G-EGPGGVFVLDGEtFDVRGRWELDRGPQYLAYDFAWHLGHDSMITSEWGTPNMFEEGLNAELLVGG-KYGHQIHVWDLQ 234 Candidatus...
Q9VFZ4            240 TQTLYQTIDLGSDGITPLEIRFLHNPKKAEGFVGCA-----LNAKVFHFKKKSD----SDeFEAKKVIDIPGKLVDtgSG 310 fruit fly
Q569D5            234 EHRRIQTIDLGEDGLIPLEIRFLHDPDAAQGLVGCA-----LSSTVFRFYKEKD----GK-WAAEKVIKVPSKKVE--GW 301 tropical c...
Q8ZUL2            237 KRRHLYAIDLGQEHRMVLEVRPLHDPTKLMGFVNVVlntkdLSSSIWLWFY-ED----GK-WQAERVIDIEAQPFE--GP 308 Pyrobaculu...
jgi:Msed_0967     238 RRKRVSSITLGEENRMALELRPLHDPTKLMGFINMVvslkdLSSSIWLWYF-ED----GK-WNAEKVIEIPAEPGE--G- 308
Q4JBV8            241 KRKKISSITLGEENRMALELRPLHDPTKLMGFINLVvslkdLSSSIWLWFF-ED----GK-WQAQKVIDIPAEPAE--GN 312 Sulfolobus...
Q1AZ66            235 RRRHLQALDVGEEHQMVLELRPAHDPARTYGFVGVVvsledLSASVWLWHR-QN----GS-WGIRKVIEIPAEPAE--PD 306 Rubrobacte...
jgi:Franean1_5378 342 SGRHRQTVDLGDDNQMVLEVRPAHDPRASHGFAGVVtnvtdLSASVWLWYR-DG----DR-WAARKVITIPPEPAE--PA 413
WP_009946310      240 AGRHVQRVDLGAEHQMVLELRPAHNPDATWGFAGVVvstadLSASVWRWYR-DG----DR-WNAEKVITIPAEPAD--PE 311 Saccharopo...
WP_012403483      235 TRKHKQVVDFGAENQLVFELRPAHDPTKAYGFVNSVislkdLSASIWTWYR-DG----DQ-WAARKVIEIPAEPAD--AS 306 Paraburkho...
Q01W20            235 KRKHKQVLDLGAEQQLVFELRPARNPTKAYGFVGVVvslkdLSSSIWVWYQ-DGratdTA-WKIRKVIEIPAEPAN--PE 310 Candidatus...
Q9VFZ4            311 VAEDM-------GGMISDIIISLDDRFLYVNCWRHGDVRQYDITDPENPKLTGQLFLGGAICSDlpnvivkedkelkerp 383 fruit fly
Q569D5            302 ALPEM-------PGLITDILISLDDRFLYFSNWLHGDIRQYDITDPRNPKLVGQIFLGGSILRGgpvtvled-kdlecqp 373 tropical c...
Q8ZUL2            309 -LPPVlkdfkmvPPLVTDIDISLDDRFLYVSLWGLGELRQYDITNPHQPRLAGRVKIGGLYHRE---------------- 371 Pyrobaculu...
jgi:Msed_0967     309 -LPEIikqfkvvPPLVTDIDLSLDDKFLYVSMWGIGEVRQYDVSDPFRPRLAGKVRLGGILHRA---------------- 371
Q4JBV8            313 -LPDIlkpfkavPPLVTDIDLSLDDKFLYVSLWGTGELRQYDVSNPFKPVLTGKVKLGGILYRA---------------- 375 Sulfolobus...
Q1AZ66            307 QLPPLlkdfgavPPLVTDINLSLDDRFLYVSCWGTGELRQYDVSDPFNPRHTGSVRLGGIVRKA---------------- 370 Rubrobacte...
jgi:Franean1_5378 414 DLPPVirpfgavPALVTDIDLSVDDRWLYVSCWGTGELKQFDVRNPFSPREVGSVRLGGIVRRT---------------- 477
WP_009946310      312 DLPPAlkpfgavPPLVTDIALSVDDRFLYVSCWGTGELKQYDVSDPSQPREVGSVRLGGITRRT---------------- 375 Saccharopo...
WP_012403483      307 LLPPMlkgfgavPPLVTDIALSLDDRFLYVSCWGTGDLRQYDVSDPMKPELTGTVRIGGIAARA---------------- 370 Paraburkho...
Q01W20            311 LLPPMlkgfgavPPFVTDINLSLDDKYLYVSCWGSGEFRQYDVSDPFHPKLNSKVQMGGIARRA---------------- 374 Candidatus...
Q9VFZ4            384 PARYVKGRRLEGGPQMLQLSLDGKRLYVSSSLYSPWDKQFYPKMVSQGGHIVLIDVDTVN-GGISLNEDFLV---DFANE 459 fruit fly
Q569D5            374 DPVIVKGKKVPGGPQMIQLSLDGKRLYVTNSLYSKWDKQFYPDMIKEGSVMLQIDVDTEK-GGLKLNPNFLV---DFGKE 449 tropical c...
Q8ZUL2            372 PHPSGA--EATGAPQMISVSRDGRRVYITNSLYSSWNNQFYP-GL--RGWMAKVNVNPE--GGLELEKEFFV---DFGR- 440 Pyrobaculu...
jgi:Msed_0967     372 DHPSGF--RLTGGPQMLEVSRDGRRIYVTNSLYSTWDNQFYPEGL--KGWMVKINSSQD--GGLEVDKEFLV---DFGE- 441
Q4JBV8            376 DHPSGN--KLTGAPQMVEISRDGRRIYVTNSLYSSWDNQFYPEGV--KGWLVKLNANPE--GGLDIDKEFFV---DFGE- 445 Sulfolobus...
Q1AZ66            371 AHPASG--PLNGGPQMVEVSRDGRRVYFSNSLYASWDEQFYPVGI--RGWIAKAEADPG--GGLSLDPGFFT---EVGDG 441 Rubrobacte...
jgi:Franean1_5378 478 PHPAAPDEPLAGGPQMVEISRDGRRVYLTNSLYAAWDDQFYPDGV--GAWMARLDADADA-GGVSPDVRFFPrgaDFRG- 553
WP_009946310      376 PHPAAPDEALSGGPQMVEVSRDGRRIYLSNSLYGSWDDQFYPDGV--GAWLAKLDTDPDAgGGLTPDPRFFPrgaEFHG- 452 Saccharopo...
WP_012403483      371 THPAAGERPLNGGPQMVEVSRDGSRVYFTNSLYGAIDDQFYTEGL--DGWMVSLDAGKN--GGLAVAKNFFV---DWPKS 443 Paraburkho...
Q01W20            375 AHPSNPGTPLNGGPQMVELSRDGRRVYVTNSLYNAVDDQIYPDGI--KGWMMKMDVDSNT-GAMRVDPRFFP---QFDG- 447 Candidatus...
Q9VFZ4            460 PYGPSLPHEMRYPGGDCTSDIWL 482 fruit fly
Q569D5            450 PGGPVLAHELRYPGGDCSSDIWV 472 tropical clawed frog
Q8ZUL2            441 ----ARAHQVRLWGGDASTDSFC 459 Pyrobaculum aerophilum
jgi:Msed_0967     442 ----ARAHQVRLKGGDASSDSYC 460
Q4JBV8            446 ----ARAHQTRLRGGDASSDSYC 464 Sulfolobus acidocaldarius
Q1AZ66            442 ----LRPHQIRLEGGDSSSDSYC 460 Rubrobacter xylanophilus DSM 9941
jgi:Franean1_5378 554 ----LRVHQIRLEGGDASSDSYC 572
WP_009946310      453 ----LRVHQVRLQGGDASSDSYC 471 Saccharopolyspora erythraea
WP_012403483      444 ----HRPHQIRLEGGDASSDSYC 462 Paraburkholderia phymatum
Q01W20            448 ----MRPHQTRLEGGDASSDSYC 466 Candidatus Solibacter usitatus Ellin6076
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap