Conserved Protein Domain Family
RHE_PE00001_fam
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NF040876: RHE_PE00001_fam 
RHE_PE00001 family protein
RHE_PE00001, the founding member of this family, was shown to be essential for growth on rich medium, despite being encoded on a plasmid. Members of this family contain an apparent helix-turn-helix domain described by Pfam model PF11972, suggesting DNA-binding activity.
Links
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Statistics
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PSSM-Id: 468812
Aligned: 32 rows
Threshold Bit Score: -1
Created: 24-Apr-2023
Updated: 4-May-2023
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_018899375   5 RYDLANLPIHSLLKPFTEATAALCRLDERIARSAVGTGLLERQNFVDACASLWLDGELVHLEDLVLHDAGADVRAPTHEL 84  Rhizobium sp. 2...
WP_003527892   2 RYEIPDPLDPALLPVLIAAEDGLARLDERAGRHAVAEGFRERGQFFDAAAALWIAGELVHVEDLVLHDSHMDSRAPSHEL 81  Sinorhizobium m...
WP_014762946  15 RYETPDPLHPTLLPGIIAAEDGLARLDERTSRHAVADGFRERGQFFDAAAALWVAGELVHVEDLVLHDSHMDTRAPSHEL 94  Sinorhizobium f...
WP_011427860   2 RYDIDGVMLQTLLPLLAAAEDAAARLDERVLRSSVGEGFAERSHFFDAAGALWVAGELVHVEDLVLHDAHMDSRAPSHEL 81  Rhizobium etli
WP_007812071   2 RYDIDAATLQTLLPAIAGAEDALARLDERAARSPVGQGFAARSHFFDAAGALWVAGELVHIEDLVLHDAHMDSRAPSHEL 81  Rhizobium sp. C...
WP_018856706   2 RYEIDSPLLVSLLPTIVEAEDGLARLDERAARAAIAEGFAERRHFFDAVGALWVAGELVHVEDLVLHDAHMDTRAPSHEL 81  Rhizobium sp. 4...
WP_018896505   2 KHEIDTTSLMTLLPLFVRAEDALARLDERALRSSIADGFSERRHFFDAVGALWVAGELVHLEDLVLHDAHMDARAPSHEL 81  Rhizobium sp. 2...
WP_002719010  26 YQIPDPLPWSQIAGPLAAAEDALARLDERLARSPVRDGWIARTHFSDAAAALWLEGELVHLDDLVLHDAGMDVRAPTHEL 105 cat scratch dis...
WP_009859457   5 YSIPDPLPWAQLAGPLAIAEDALARLDERLAKSPIRDGWIARTHYTDACASLWLEGELVHLEDLVLHDAGMDIRAPTHEL 84  Bradyrhizobium ...
WP_015822440   6 TRLPDALPWRELAPPLARAEDALARLDERLRTSPIRDGWIARTHFSDAAATLWLEGELIHLEDLVLHDAGMDVRAPTHEL 85  Methylorubrum e...

WP_018899375  85 TIARDVLRSRRRIASQPPAWALSPDGLRTLR--QAPaqagPAaSFGEDEVRDTADAKVATPGGGEgerddeadataSDPD 162 Rhizobium sp. 2...
WP_003527892  82 TIAHAVLRARRRLDLADADWALSQPGLSALRgdAVPvvrhDSlDPPALRDDLGETDAPDAADGPM-----------DGSL 150 Sinorhizobium m...
WP_014762946  95 TIAHAVLRVRRRLELAEPGWALTSPGLNALRgeQGAalanEN-YCVAPNAHTGPHETRELADDTD-----------GNPL 162 Sinorhizobium f...
WP_011427860  82 TIAHSVLRTRRRIWTGEPSWALGASGLATLTatTGEgeglTP---EAKSPAAAVEAD--DEGEDE-----------DAPL 145 Rhizobium etli
WP_007812071  82 TIAHSVLRTRRRIETADSGWALSATGLGVLTasPLEgeemAP---ESTGPAPIGHEP---DDEDE-----------EAPL 144 Rhizobium sp. C...
WP_018856706  82 TIAHSILRARRRIWTAAPDWALSGSGLSILAg-dTQgegaAP---ETRSAKALVEDD--DAENEA-----------DALL 144 Rhizobium sp. 4...
WP_018896505  82 TIAHAVLRARRRIWTSDPYWALSETGMTVLTg--IGgeqqR----APEFKSVYRDHD--NDDQEP-----------DAPL 142 Rhizobium sp. 2...
WP_002719010 106 TRAHAVLRTRRRIADAKPDWALSVAGLAGLRgrGEQgdreEErGNRNEEEDEVRDREDED-SEADaperf-rvapaDDRM 183 cat scratch dis...
WP_009859457  85 TRAHAVLRTRRRIADAKPDWAPSPAGLDSLRgrTGQgeweEGrGIRKEGERSFVGGYDS--GDADldtpl-ggiesDPHL 161 Bradyrhizobium ...
WP_015822440  86 ARAHTLLRARRRIAGAAPGWALSPAGLEALRgrAG------------EADATHPEVEDPEPVEDEdeasd-rsiddDEAF 152 Methylorubrum e...

WP_018899375 163 AGVFAEIDAVLARSAAAIEEAKRPSrva----shrDAd------TKALVYDLDWDEEARLEEWRDVVRQAQELPPVLAAI 232 Rhizobium sp. 2...
WP_003527892 151 SDAFAEIDAAIARSARLLDIHAGSAvmaeqpvietQSsrveptgQLGLLFDDDWDETARLDAWRAVLPVADQLPSALGAA 230 Sinorhizobium m...
WP_014762946 163 ASEFAELDAAVARSQRLLDFHVGSLpeadpamskeRPaae-psgQLGLLFDEEWDEAARLDAWRGVLVAADQLPACLGAA 241 Sinorhizobium f...
WP_011427860 146 AAEMAEIDAILARSQKLIDIHTG-KapsgeeaaaiSPakr-nydPLGLLGDEEWDEEQRLAEWRGVLPLADSLPPVLGAV 223 Rhizobium etli
WP_007812071 145 AAEIAELDALLARSQQLLDRHAG-Kpvaee-legaAPlqr-dddPLGLFGDDEWNEEERLREWRGLIALVEDLPPSLAAA 221 Rhizobium sp. C...
WP_018856706 145 SAELAEIDAILERSQRLLDSHGSPGapelheapdrVRekr-sddPLGLFDDEEWDEAARLRAWRKTISIADSLPPALGAA 223 Rhizobium sp. 4...
WP_018896505 143 ATELAEIDAVLERSSRLLDDLAR-Gvrea--kpepTRper-addRLALLDDEDWDEAARLREWRSVIAVADTLPPTLGAA 218 Rhizobium sp. 2...
WP_002719010 184 ADIFAAVDAAIAQADRTLAGETTDRrp-------kRPe------RDPLVYDLDWDEDERLDAWRAVVDQTRNLPPALATA 250 cat scratch dis...
WP_009859457 162 AAAFAAVDAANAKAERTLAGGSr-----------tQSe------RDPLVYDPDWDEDARLDDWRAVVERTRILPPTLAAA 224 Bradyrhizobium ...
WP_015822440 153 SELFASVDAAIAEADRTLAGERHPaa--------pSGe------RDPLVYDLDWDEDARLTEWRAIVDQTRDLPPTLAAA 218 Methylorubrum e...

WP_018899375 233 VTLDAWNELSVSQHAPWLARLLAAALLRQAGISTGgHLVALNLGLKTIPVDRRRHRDRETRLLAIAHGLLAAAEIGLKEH 312 Rhizobium sp. 2...
WP_003527892 231 VLFDAWERIEPLRRQHWLGSLLVGAYLRFRGKVGS-HVLAYNTGLKTIRHERRRSKDRLTRLTGFLEAMSAAAELGMKEL 309 Sinorhizobium m...
WP_014762946 242 VLYDAWERVEPLRRQHWLGSLLVGAYLRSRGKIAS-HVLAFNTGLKTIRHERRRSKDRLTRLSAFLEAMAVTADLGLKEL 320 Sinorhizobium f...
WP_011427860 224 ILFEAWDRIEPLRRQHWLGGLLVESYLRARGKVAS-HLFSFYGGLKLVRHERRRARDRATRLQAFLEAMQLAAAAGLKEI 302 Rhizobium etli
WP_007812071 222 ILFDAWERIEPLRRQHWLGGLLIASSLRLRGKVTS-HLFSFHTGLKQIRHERRRSRDRVARLQAFLDAMRESAITGLKEI 300 Rhizobium sp. C...
WP_018856706 224 LLFDAWERMEPLRRQHWLGGLLVASYLRARGKVTS-HLFAFNAGLKTIRYERRRSRDRLTRLQAFLEAMAESAAAGLKEM 302 Rhizobium sp. 4...
WP_018896505 219 VLFDAWEQIEPLRRQHWLGGLLVSGYLRQRGKITS-HLFSFFAGLKTVRYERRRSRQRLIRLQSFLEAMVESADLGLKEM 297 Rhizobium sp. 2...
WP_002719010 251 IAADAWHALEPLQHAPWLGRLLAAALLRARGKARS-HLPCLHDGLKAIPRERRRPRDAASRLAVQLEAIAAAAEAGLKDH 329 cat scratch dis...
WP_009859457 225 LATEAWDAIAPLQHTPWLGRLLAASVLRARAKTRW-HLPCLHDGLKAIPRERRRPRDAAARLAVQLEAITAAAAAGLKDH 303 Bradyrhizobium ...
WP_015822440 219 LVHEAWSTIEPLQRAPGLGRLLTGALLQDRGKSRA-HLPCLAEGAKAVPRERRRSRDAATRLVAELEAIAAAAEEGLKQH 297 Methylorubrum e...

WP_018899375 313 DRLALARTMMEREVSGRRTSSRLPELVELVMAKPLVSAGMVAETLGVTQQAARRIVVELGLREMTGRGRFRAWGVL 388 Rhizobium sp. 2MFCo...
WP_003527892 310 DRLSLARTQMEMRIRDRRSNSNLPGLIDLVLSRPIVSAPLIARHLGVTPRGALNLVRELGVREMTGRGRYRGWGVL 385 Sinorhizobium meliloti
WP_014762946 321 DRLSLARTQMEMRIKDRRSNSNLPGLIDLVLSRPIVSTAMIARHLSVTQRGALNLVRELGVREITGRGRYRGWGVI 396 Sinorhizobium fredii
WP_011427860 303 DRLSLARTQMELRFRGRRSNSSLPELADFILSRPMVSAAMVARHLRITPRGALNLVNEIGIREITGRGRYRAWGII 378 Rhizobium etli
WP_007812071 301 DRLSLARTQMELRFRGRRSNSSLPQLADFILSRPMVSAAMIARELGVTQRGALNLINEIGIREITGRGRYRAWGII 376 Rhizobium sp. CF142
WP_018856706 303 DRLSLARTQMEIRFRDRRSNSSLPQLADFVLSRPMVSSAMVARELRITSRGALNLLNDIGIREITGRGRYRAWGII 378 Rhizobium sp. 42MFCr.1
WP_018896505 298 DRLSLAQQQMQMRFKDRRSNSSLPDLAQFVLSRPMVSSAMVARELKVSGRGALNLLNDIGIREITGRGRYRAWGII 373 Rhizobium sp. 2MFCo...
WP_002719010 330 DRWQTARTLLARKLDGRRSTSRLPALIDYVLTRPIVSAAMIAKELKITPRAAQNLVAELGLREATGRGRYRAWGIL 405 cat scratch disease...
WP_009859457 304 DRWLNQRTLLTRKLAGRRATSKLPALLDYMLTRPIASAGMIAKELKITPRAAQDLVGELDLREVTGRGRYRAWGIL 379 Bradyrhizobium sp. ...
WP_015822440 298 DRWLLARTLLLRKLDGRRSTSRLPELIELVISRPLVSAGMIAKELDITPRSAQNLVAELGLREATGRGRYRAWGVL 373 Methylorubrum extor...
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