Conserved Protein Domain Family
PLN00025

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PLN00025: PLN00025 
photosystem II light harvesting chlorophyll a/b binding protein; Provisional
Statistics
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PSSM-Id: 215033
Aligned: 90 rows
Threshold Bit Score: 475.005
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
255548299   1 MATMTLsSTFTGKAVPLSAQtelPATVRSSN----GRVTMRKTAGKPAAs--SGSPWYGPDRVKYLGPFS-GEPPSYLTG 73 
159484394   6 AKSSAR-AAVSRRST--------------------VKVEARRTVKPASKastPDSFWYGPERPLFLGAFT-GEPPSYLTG 63 
159471942   8 SVRSSVrSTVSSRSARVVPR--------------------------------AAIEWYGPDRPKFLGPFSeGDTPAYLTG 55 
159471686   8 AVRSSVrPTVSGRSARVVPR--------------------------------AAIEWYGPDRPKFLGPFSeGDTPAYLTG 55 
302835026  11 STSVRP-TPVGSRAARVVPR--------------------------------AAIEWYGPDRPKFLGPFSeGDTPAYLTG 57 
302840162   1 -------MAAIPKSAVRSSVrpaTASSRA------ARVVPR-----------AAIEWYGPDRPKFLGPFSeGDTPAYLTG 56 
302842165  10 RSSVRP-VTVASRAARVVPR--------------------------------AAIEWYGPDRPKFLGPFSeGDTPAYLTG 56 
302842321   1 -------MAVVAKSALRSSVrpaTVASRA------ARVVPR-----------AAIEWYGPDRPKFLGPFSeGDTPAYLTG 56 
302849646   8 AVRSSVrPTVASRAARVVPR--------------------------------AAIEWYGPDRPKFLGPFSeGDVPSYLTG 55 
302854015   6 SVVNVQ-AKLTKKGS--------AGPKKAAPppgpRKTIRERAGWWGNGtseRLSQFYGPERALWLGPLS-GSAPSYLTG 75 
255548299  74 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 152
159484394  64 EFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCIFPELLGS-YGVPFGEAVWFKAGAQIFQEGGLDYLGNPN 142
159471942  56 EFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCITPELLAK-NGIPFGEAVWFKAGAQIFAEGGLNYLGNEN 134
159471686  56 EFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCITPELLAK-NGIPFGEAVWFKAGAQIFAEGGLNYLGNEN 134
302835026  58 EFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKyAGVSFGEAVWFKAGAQIFAEGGLNYLGNEN 137
302840162  57 EFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKyAGVSFGEAVWFKAGAQIFAEGGLNYLGNEN 136
302842165  57 EFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKyAGVSFGEAVWFKAGAQIFAEGGLNYLGNEN 136
302842321  57 EFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKyAGVSFGEAVWFKAGAQIFAEGGLNYLGNEN 136
302849646  56 EFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCVTPELLSKyAGVSFGEAVWFKAGAQIFAEGGLNYLGNEN 135
302854015  76 EFPGDYGWDSAGLSSDPETFKRYRELELIHARWAMLGALGCVTPELLAK-NGTPIAEPVWFKAGAQIFQEGGLDYLGNPG 154
255548299 153 LIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
159484394 143 LVHAQSILAILGTQVLLMGAIEGYRVNGGPLGEGLDKLYPGGS-FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFV 221
159471942 135 LIHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGA-FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFV 213
159471686 135 LIHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGA-FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFV 213
302835026 138 LVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGA-FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFV 216
302840162 137 LVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGA-FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFV 215
302842165 137 LVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGA-FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFV 215
302842321 137 LVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGA-FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFV 215
302849646 136 LVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGA-FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFV 214
302854015 155 LVHAQSILATLACQVILMGAIEGFRVNGGPAGEGLDKLHPGGPwFDPLALAEDPDAFAELKVKEIKNGRLAMFSMFGFFV 234
255548299 232 QAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
159484394 222 QAIVTGKGPLQNLSTW-PTPAPTTPSPTPPSSPPSK 256
159471942 214 QAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTPSA 249
159471686 214 QAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTPSA 249
302835026 217 QAIVTGKGPIENLSDHLANPSAVNAFAYATKFTPSA 252
302840162 216 QAIVTGKGPIENLSDHLANPSAVNAFAYATKFTPSA 251
302842165 216 QAIVTGKGPIENLSDHLANPSAVNAFAYATKFTPSA 251
302842321 216 QAIVTGKGPIENLSDHLANPSAVNAFAYATKFTPSA 251
302849646 215 QAIVTGKGPIENLSDHLANPSAVNAFAYATKFTPSA 250
302854015 235 QAIVTGQGPIENLESHLANPGVNNAFAFATKFTPSA 270
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