Conserved Protein Domain Family
ND4

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MTH00163: ND4 
NADH dehydrogenase subunit 4; Provisional
Statistics
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PSSM-Id: 214443
Aligned: 222 rows
Threshold Bit Score: 191.521
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
171473608   1 MMKMIMPL--IFL---AFVNMSMvsnkNKWDSIT----FLVISLFVLLSSLSLtEGIKIISSWVTMDVMSISLIYLSFYL 71 
51830148    1 MLKFLLMIlmTLI---MKMKLTK---------------SMMAILMIMFNLSLQgTSIQKISYIFMGDLISFWNSNLSLWI 62 
52221072    1 MLKFLMMA--LVMmfmNKNTLKP----SMWIMVS----MFNLSIHQ--------GSTGKMSYLLIGDSLSFWITNMSLWV 62 
160425218   2 FLSSILAMspLYIyslFKEIYFS---------------CYASIIVMMFLCSNS-SVPIIFNWSMEMGKFALWMIIMMFWS 65 
171260068   1 -MSFMYMF------------------------------LFSNNMIL--------LFLVMFTYLIFLENFINCMMMFMTMI 41 
226968610   1 ---------------------------MSYMFLYminsNFMIFFYFISLINLF-----------CLNSLMLYMYMMTFFL 42 
302632635   3 FMYLFFFTnnVIL-------------------------TFMIMFLY---------------LIFFENFINCMMMFMTMIM 42 
51830189    1 MLKIFFPIlsSSM---IPSKLSY---------------LTLSTNLMLVNWSISnSNMHSISYFLMGDLLSFWMTNLTLWM 62 
52220947    1 -MKFFMVImmMIMvpkTKQLIIN---------------YSLVMLMF--NLNMQkQEVSKISYFMWGDELSFWTFNLSLWI 62 
89257217    1 MIYFFLIS--IFF---------------FFSNEEk--vMLCVVFLFYVFFLSMnGDVHGGGMLL--DDLSFSMVFLTLIL 59 
171473608  72 ILMMYLSSINIFNTNNFTNLYTFMMILLLISLLLSFLASNYILFYMAFELSLIPTLFIIMGWGYQPERLQAGIYFMMYTL 151
51830148   63 VYSMMFMTTT------NQNFNSKILLTTMLIFVSIFYTWNFMIFYIIFESSMIMMLIMITSWSYQPERTEALMFMILMTI 136
52221072   63 IMLILSIKMSNYEKHK------MIFMLLTMILMTTFYCWNFLLFYIMFEMSMVMIIITVMIWGYQPERVEATMFMVIMTS 136
160425218  66 SMLINLKFSSQSK----------LMISAGVVIYLFFSTSSIIVMYSMFELSLIPILYIIYSQGLNPERIRAGMFLLIYTV 135
171260068  42 MMKMILFSVKEKMNNYFFFMKKKIIMLMMIMLLMFFYTKKMINFYIYFELISLMIFSLIFFSSFSNQRLKASIYIFMFMG 121
226968610  43 MKMIFFSLKE-KMLVYFFIMKKNIIKLMFLFMLLFFSSMNLIFFYIFFEIISLLIFFLVYLSSFSIMRMKASIYMFVFMS 121
302632635  43 MKMTLFSMKE-KMNNYFFFMKKKMIMMLMIMLLMFFYTKKMINFYIYFELISLMIFSLIFFSSFSNQRLKASIYIFMFMG 121
51830189   63 ILTISFLKIN-------SKKYSMISNMILMIMFLTFYNWNIMMFYIMFEISLMMIIIYILMWSYQPERLESTLYMLIMTS 135
52220947   63 GFVLIFSKIN------QPKIYNKSVFMMLILLMMTFYSWNLMMFYLMFEMSMIVVLMIIMTWGYQPERVEAALFMVMMTV 136
89257217   60 MMIVFMSVESGKKKH-------FFLSLSMSIVVMYFLVKNIFSFFILFEFSLLPIFFLISFWGIQPERLMAVKFMMVYTL 132
171473608 152 FASLPLLLMLLFLNSSFFSMWMWSSLVnifmfkisggFMMLA--------FIMLIMAFLVKLPMYLTHLWLPKAHLEAPV 223
51830148  137 MFSLPFMIIMMYKYKSLNFWFIKID---------------LSvw-----sYLSFMFIFMMKMPSYFIHFWLPKVHVEAPV 196
52221072  137 ALSLPFFLSLMNKFNYLNFWMLPAKIQmw--------------------eYLSIMFIFMVKLPAFTLHAWLPKLHVESPI 196
160425218 136 MASIPLLYSLISISPKIYSLNMPLLSY----------SFEFSsf-----mAIGITLAFLVKMPLFLFHSWLPKAHVEAPV 200
171260068 122 MSTFPMLVMFFFLNENT-MLLIFFL-------------------------------GFLIKIPIMFFHLWLPKAHVEANF 169
226968610 122 IGTLPMLVMIFFINEK---------TF-----------------------LMIFILSFSVKMPIVFLHLWLPKAHVEANY 169
302632635 122 MSTFPMLTMFFFLNEN-TMLLIFFL-------------------------------GFLIKIPMVFFHLWLPKAHVEANF 169
51830189  136 IFSLPFMYLIIMELSNTNFWFNSLKLNmw--------------------kFMSMVFIFSMKMPIYFLHMWLPKAHTEAPI 195
52220947  137 MTSLPFITTMMNNSTNLSLWNIQYMEMnk-------------------weYLSLMLVFMMKMPTMFLHMWLPKVHVESPV 197
89257217  133 VASSPLLFFFIFLSSKGSNLMYLNENF-------------FDssskwgylVFLSLLAFWVKIPLFFFHSWLPKAHVEASL 199
171473608 224 TGSMILAGVLLKLGGYGLIRVLSKIYFSLNL--ISGVFLSLSLVGMTLIGLVCCRLNDLKALVAYSSVAHMGLVICGLLT 301
51830148  197 QGSMILAAIMLKMGCYGMMRMMMMMIKF-KM--INLIISTTMMWSMVILSMSCFIQTDIKTLIAYSSVVHMMLVLLTIMT 273
52221072  197 QGSMILAAVMLKLGGYGMIRMNVMTNFINNV--TSHIIIAFSTWSIIILSIVCLMQSDLKSMIAYSSIVHMGLTLAGISL 274
160425218 201 EGSVFLAAVMLKMGSFGLIKMMSIISWKSNAl-FPLMIISLSLIGSIMSAVMILFTDDLKKMVALSSVSHMNFSIASIFL 279
171260068 170 YDSMILASLLLKLGGYGMMNLNLIKKIN-----FFFMWTLMSIF---FLSVSMIFLMDLKMIFAYSSIIHMNGMVMMLLS 241
226968610 170 YDSMILASLLLKLGGYGML-----IMDMNFK--LNFFFL-WGLFGSLIISFMVLFLLDVKMIMAFSSIIHMNIMLVMFLN 241
302632635 170 YDSMILASLLLKLGGYGVM-----LLNLNKKmnFFFMWTLMSIF---FLSISMIFLMDLKMIFAYSSIIHMNSMVMMLLS 241
51830189  196 QGSMILAALMLKLGSYGLTRISMILSKE-KT--FSISLIMLLMLMTILLSMNCIIQTDLKMLIAYSSIVHMMMSFICIIL 272
52220947  198 QGSMILASILLKLGSYGLIRMTSTNSEMNNK--LEWIILSFSLWTALYLSMICFMQTDLKTMIAYSSVVHMTLVFATITL 275
89257217  200 EGSMILAGVMLKVGMYGMIRVLSFFSYSMLKq-VIALFFCIGLIGSLVSVMVAISSDDMKMSVAFSSISHMNFCVASLAS 278
171473608 302 GMTWGMNGGLMMMISHGLGSSGLFCFVNMIYERIHSRSLFLNKGVIAIMPIFTLMMFLLCCSNISAPPSINLLSEIFLII 381
51830148  274 NKNKSVFGSIITMMSHGLCAAALFFMSNIFYSNSKSRSILINKGMAQIIPMMMLMWFAGCMSNTPMPPFISIIGEIISFK 353
52221072  275 TKEKGIISSVIIMLGHGMCSSALFFLCNQMYKNNKSRSMIMNKGTTTMSPTMTTSWFILCMMNAPMPPSINILGEILTLK 354
160425218 280 NKIISFKACMIVMISHGLSSMGLFFFVTDVYKSVGSRSLAITKGLVSKSSFMTILSLLLWMGAMGLPPMISFKGEFFSIS 359
171260068 242 NNFFTEKMFVIMMISHAISSSMMFYIIGVIYEFTFSRMMMINKNFMINNLILFMIIFFTLFVNMAMPPFMTFFSEMYMYM 321
226968610 242 SSVFMEKIFSTAMLSHALISSMMFYMIGMIYDQSFSRNMFINKNFFLNFMFFFNFFFLICFINMGSPMFMSFFSEMYTYM 321
302632635 242 NNFFTEKMFVQMMISHAISSSMMFYIIGMIYEYTFSRMMMINKSFLINNLILFMIIFFILFINMSMPPFMTFFSEMYMYL 321
51830189  273 NKNLAINSMLIMSISHGLTSSMMFFMANMVYLKSKSRNLIINKGIMNNSNSDKIIWFTACMMNLPMPPFLGILSEIFSMK 352
52220947  276 DKSKSMLGGMYIMIGHGTCSAGLFYMANIMYKNSKSRSIIINKSMFSMNPSAMMMWFFMCMSNSPMPPSINFMGELFSLK 355
89257217  279 MKISSIESWIMVMISHGLSSPMMFFLVTKIYKCSGSRKMLISKGLVSKFPFFQFISFIIWGMNVSVPPSLSFLGEVSMIF 358
171473608 382 SVYSY---DKFCMILFPLGSFLGAVFTFYMFSFSQH---GKFYL--V-VHSFLTS-FFSEVHVLFLHILPINFLILKNDL 451
51830148  354 MILN----STNMMTMIFMMSLTSSMFSIFMYYVMVH---GKFSK--M-TSMNFLI-KEKVVLTLIMLMAPTVLLSLKPLM 422
52221072  355 LVMEW---SMKSVLFILMMMMVSFSYSIIMFCVPTH---GNYSK--M-SKKITTY-NSKNLTITIMHMIPGIAMIIKSNL 424
160425218 360 TLLSL---SMLTLIFIFLFMIISSSYSMMCFIYLAH---SSHKSvgNiQFSLASG------LKLVSCIIPMMLLFFFSES 427
171260068 322 SLINY---SKKMMIILIYMLLVSVMFNLMVLKNMGM---SNMNK----FFKINQM-KTKNLFLLKEHLMLLLFM------ 384
226968610 322 FLIDYn--FNKMNLLIFMIMFFSCMLNLYLLKNLGM--------------------MVMSKFFKMFNLKLITLLILKEHL 379
302632635 322 SLINY---SSKMMIILIYILLVSIMFNLVVMKNMGM---SNMNK----FFKINQM-KTKNLFLVNEHFTFILFM------ 384
51830189  353 LILDW---YPMMITMVIIMMMFSFMFSLFIFIQISQ---TNKSK--I-INMGNLK-TLKKNLITNLHWMPNLMI-IKLSM 421
52220947  356 SIMNWsgtSSTVVVTMTTIMFSSSLYSIFMFYIITH---GMLKK--S-TNTVKIF-NSKNMNTTSMLIIPMIMISINPDL 428
89257217  359 SIYST---YSWSMMVVLFYFVFSSFFSMFNYGIQSHssvGMPWKksIsLMAFSISvIFSGFFFFFFFFFFVFICS----- 430
171473608 452 FFML 455
51830148  423 LLIS 426
52221072  425 MMTT 428
160425218 428 ICPQ 431
171260068     ----    
226968610 380 FYLL 383
302632635     ----    
51830189  422 IMLS 425
52220947  429 LII- 431
89257217      ----    
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