Conserved Protein Domain Family
Alpha_E1_glycop

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pfam01589: Alpha_E1_glycop 
Alphavirus E1 glycoprotein
E1 forms a heterodimer with E2 pfam00943. The virus spikes are made up of 80 trimers of these heterodimers (sindbis virus).
Statistics
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PSSM-Id: 279870
Aligned: 2 rows
Threshold Bit Score: 1050.02
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8JUX5  744 RTAKAATYQEAAVYLWNEQQPLFWLQALIPLAALIVLCNCLRLLPCCCKTLAFLAVMSIGaHTVSAYEHVTVIPNTVGVP 823  Chikungunya virus s...
P03315  751 PRAHAASVAETMAYLWDQNQALFWLEFAAPVACILIITYCLRNVLCCCKSLSFLVLLSLG-ATARAYEHSTVMPNVVGFP 829  Semliki Forest virus
Q8JUX5  824 YKTLVNRPGYSPMVLEMELLSVTLEPTLSLDYITCEYKTVIPSPYVKCCGTAECKDKNLPDYSCKVFTGVYPFMWGGAYC 903  Chikungunya virus s...
P03315  830 YKAHIERPGYSPLTLQMQVVETSLEPTLNLEYITCEYKTVVPSPYVKCCGASECSTKEKPDYQCKVYTGVYPFMWGGAYC 909  Semliki Forest virus
Q8JUX5  904 FCDAENTQLSEAHVEKSESCKTEFASAYRAHTASASAKLRVLYQGNNITVTAYANGDHAVTVKDAKFIVGPMSSAWTPFD 983  Chikungunya virus s...
P03315  910 FCDSENTQLSEAYVDRSDVCRHDHASAYKAHTASLKAKVRVMYGNVNQTVDVYVNGDHAVTIGGTQFIFGPLSSAWTPFD 989  Semliki Forest virus
Q8JUX5  984 NKIVVYKGDVYNMDYPPFGAGRPGQFGDIQSRTPESKDVYANTQLVLQRPAAGTVHVPYSQAPSGFKYWLKERGASLQHT 1063 Chikungunya virus s...
P03315  990 NKIVVYKDEVFNQDFPPYGSGQPGRFGDIQSRTVESNDLYANTALKLARPSPGMVHVPYTQTPSGFKYWLKEKGTALNTK 1069 Semliki Forest virus
Q8JUX5 1064 APFGCQIATNPVRAMNCAVGNMPISIDIPDAAFTRVVDAPSLTDMSCEVPACTHSSDFGGVAIIKYAVSKKGKCAVHSMT 1143 Chikungunya virus s...
P03315 1070 APFGCQIKTNPVRAMNCAVGNIPVSMNLPDSAFTRIVEAPTIIDLTCTVATCTHSSDFGGVLTLTYKTNKNGDCSVHSHS 1149 Semliki Forest virus
Q8JUX5 1144 NAVTIREAEIEVEGNSQLQISFSTALASAEFRVQVCSTQVHCAAECHPPKDHIVNYPASHTTLGVQDISATAMSWVQKIT 1223 Chikungunya virus s...
P03315 1150 NVATLQEATAKVKTAGKVTLHFSTASASPSFVVSLCSARATCSASCEPPKDHIVPYAASHSNVVFPDMSGTALSWVQKIS 1229 Semliki Forest virus
Q8JUX5 1224 GGVGLVVAVAALILIVVLCVSFSR 1247 Chikungunya virus strain S27-African prototype
P03315 1230 GGLGAFAIGAILVLVVVTCIGLRR 1253 Semliki Forest virus
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