2VRQ,1PZ3,2C7F


Conserved Protein Domain Family
AbfA

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COG3534: AbfA 
Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]
Statistics
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PSSM-Id: 442755
Aligned: 212 rows
Threshold Bit Score: 471.152
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2VRQ_A         6 RVVVNADRVKGTINRNIYGHFSEHLG-RCIYEGLWvGEDSPIPNT-----NGIRNDVLEALKQMKIPVLRWPGGCFADEY 79 
WP_011958214   8 RIAIDEERVIGRISPLLFGGFIEHMG-RCVYRGIF-DPGSALADE-----HGLRIDVVAALRELNPRIIRYPGGNFLSGY 80 
WP_012003194   4 YVKVSNV-KTARISDMVYGHFIEHLG-RCIYGGIY-ERGSPLSDQ-----RGFRKDVLEAVKKIKCPILRWPGGNFASAY 75 
WP_012374638  41 RTLIDQANIRSQLDRRLLGAFLEHLG-RAVYTGVY-EPGSPLADE-----SGFRRDVIAEVKGLGVPNMRYPGGNFVSGY 113
WP_015924554   5 KIVLDKDFIISKIDEKVFGSFVEPLG-RCIYGGIY-EPGHPAADE-----KGFRRDVLELTKPLNVTLNRFPGGNYVSTF 77 
WP_012725226   6 TIRIAPLPGEARIDQRIYGHFLESAFfGNIEGGVF-DEGSPLAVNgpgplAGCRRDVIEAFRELGLPVVRWPGGNFTSPY 84 
WP_014731620   4 SVKVWPR-KLGKINEMIYGHFTEHLG-RCIYDGIY-NEKSPKSDS-----RGFRKDIVEAIKRIKCPILRWPGGNFVSAY 75 
WP_014080192   5 TIKADTAFTKGRIDDRIYGSFVEHMG-RVVYTGIY-EPSHKTADE-----NGFRGDVLQKVRQMGVTAVRYPGGNFVSNY 77 
WP_025228952   5 TLHLHTAFTVDTVDPRIFGGFLEHLG-RAVYDGVY-NPESVHADD-----MGCRKDVLAALRRLNFTAMRYPGGNFVSGY 77 
WP_055731628   4 KVIFDKDYIISKIDNRIYGSFIENLG-RCIYGGIY-DPEDPTADE-----NGFRRDVIQLVKELNVPMVRLPGGNFIATY 76 
2VRQ_A        80 HWKDGVGPREKRKRMVNThWGgVIENNHFGTHEFMMLCELLGCEPYISGNVGSGTVQEMSEWVEYITFDGESPMANWRRE 159
WP_011958214  81 HWRDGVGPVAQRPRRRELaWQ-SIETNHFGTHEFITLCRMLGAEPMLGVNLGTGTIEEAGAYVEYCNAPAGTLEADRRVA 159
WP_012003194  76 HWKDGIGPVEKRPKLLNYiWG-GIETNEFGTDEFIEYCREAGAEPYLSVSLGTGTLDEALQWLEYCNLDTPTKYATLRKQ 154
WP_012374638 114 HWQDGVGPKNQRPTVLERaWN-SLETNQFGTNEFMEWCKLVGTEPLLGFNLGTGSAEEAVAYVEYCNVARGTKWSDLRRQ 192
WP_015924554  78 RWEDGIGPKEKRPRRAEVaWQ-SIETNQFGINEFADWSKLNGSDVMMTVNLATRGVLEAMDCVEYCNFKEGTYWSDLRIS 156
WP_012725226  85 WWQDGIGPRDERPRRLELaWG-SEESNRFGTPEFLAWCEAVGTTPYLAHH--ARQVDDGVRWVEYTNYAGDTTLTRQRAA 161
WP_014731620  76 HWEDGIGPLEKRPQLPNYiWG-GVESNRFGTDEFIQYCREIDTEPYLAVSLGTATLDEAISWLEYCNLDTPTKYSRMRKE 154
WP_014080192  78 DWRDGIGPVEKRPRKRDLaWK-SIETNEVGLDEFMKWADAAEVAPIYAVNLGTKGIEEALAVLEYCNMETGTYYSDLRAA 156
WP_025228952  78 HWQDAVGPREKRPKVRDIaWQ-SIETNQFGPDEFLELARRMDWTPMMAVNLGTGTPEEARNWLEYCNVDGGSKWADMRRE 156
WP_055731628  77 VWEDGVGPRENRPRKPDLaWK-CIETNQVGTNEYMDWLNEIGAEAMMTVNMGTRSILDALNLLDYCNRDSGTHYSDLRIS 155
2VRQ_A       160 NGREKPWRIKYWGVGNq---NWGCGgNMRAEYYADLYRQFQTYLRNYgDNKLHKIACGANTAD----YHWTEVLMKQAAP 232
WP_011958214 160 NGAPEPFGVRYWCLGNemdgPWQIG-HMDATAYAVKAREAAKLMKWH-DPSIRLTLCGSSSSHmptyPEWDRIALEICWE 237
WP_012003194 155 SGHEKPYNVKYWGIGNevygPWQVG-HCSASEYAEKLRQFAQFMKGI-DPSIKIIAVGADD------PEWDMTVLKHAGK 226
WP_012374638 193 HGYEQPHNVKYWCLGNemdgPWQMG-RLTAPEYGRKARDAARQIRVI-SPNAQLIACGSSNTIlptyLEWDRQVLEECYD 270
WP_015924554 157 HGYKEPHGYRYWCLTNeidgVWQVG-QKTGTDYGRIAREASKGMKLL-DENIKTVLAGSSSPSqdsfPSFDAAALEESYE 234
WP_012725226 162 DGHPDPHDVPIWGLGNevygPWQMG-HRRVGDYVDAAREHARFMRAV-DPSIAFVAVGDTHE------DWNQAVVAGLGE 233
WP_014731620 155 NGHPEPYGVKYWGIGNevygPWQVG-HCSAAEYAEKLRQYTQFMKGV-DRSIKVIAVGADD------PNWDLTVLKHAGH 226
WP_014080192 157 NGHEKPYGIRTWCLGNemdgDWQIG-HKTAEEYGRIAYETGKAMKIL-DPSIELVACGSSMSTnptfGDWEQTVLEHCYP 234
WP_025228952 157 NGYEEPHNVKLWCLGNemdgPWQIG-HIPAENYAILAQQTARMMKMT-DPDIELVVCGSCAPDlptyLEWDRKVLEHVRD 234
WP_055731628 156 HGYKKPHNIKTWAIGNeldgDWQVG-QKTPFEYARLARETAKAMKLL-DGSIEIVAAGSAGQEsptfGEWEQTLIQQAHP 233
2VRQ_A       233 FMHGLSLHYYTvpgpwEKKGPATGFTTDEWWVTLKKALFMDRLVTKHSAIMDVYDP----DKRIDLIVDEWGT------- 301
WP_011958214 238 YVDYLSLHFYA-----GNR-------DDDTDSYLALARQFEDHLDALAGTLRYVKAklrsRHDVYLSWDEWNV------- 298
WP_012003194 227 VIDYISIHQYH-----GS---------EDHYETISSVYYIEERLKLLRSLIKHLK-----LDHVKIAFDEWNV------- 280
WP_012374638 271 QVDGISLHNYY-----GNTAAL---TGGSSARYLAMNLDMERQIHEIAAVCDYVQGlqrsPKRLWLSFDEWNV------- 335
WP_015924554 235 FIDYLSIHQYI-----GNA-------KNDTPNYLAKPLITDKYLKTAIATIDYIKAktksKNKVNISFDEFNT------- 295
WP_012725226 234 LVDWVSLHLYG-----ASRHL-VDPSAEEFDAVVAQAVFFEQEIAAQAQTIGDTQVehglTRPLAIAMDEWNIrhlepra 307
WP_014731620 227 LIDYISIHEYH-----GS---------DDYLGTVASVYYCEQRLRLLEALIKHL-R----LDHVKISFDEWNV------- 280
WP_014080192 235 CLDYISLHQYY-----GGQ-------EKGTSEFLAQSLDMERYIETVLNICDYVRVkkkmSHKINICFDEWGV------- 295
WP_025228952 235 EVEYLSLHRYV-----GNE-------FDDTEEYLAVTNSIDRQIEATDAVCLSAYHtrktKRRVHLSCDEWNI------- 295
WP_055731628 234 YIDYISLHQYY-----LNL-------EKDTANFLAKTLAFDEYIQSIGNLIDYMKVktqsSQDIHISLDEWNV------- 294
2VRQ_A       302 WYDVEP-------------GTNP--------------GFLYQQNSIRDALVAGATLHIFHRHCDR---VRMANIAQLVNV 351
WP_011958214 299 WYKDQTmqg--------gwQEAP--------------HLIEEVYNLEDALVVAQWLNVFLRRCDV---LKMACLAQLVNV 353
WP_012003194 281 WYQTIPeke--------maEQGI--------------VTLEESYALKDALFAAGVFCVMHRMSDI---VEIANVAQMVNA 335
WP_012374638 336 WYRARGgafa-----ngqgKFAP--------------RLLEEVYNLEDALLVGGFVNTLLRQSAR---VRVGCLAQIVNV 393
WP_015924554 296 WHSIAEearf-----nnkwRIAP--------------PLLEDEYTLEDALALGGMLLAVLKNADR---VEIACISELVNC 353
WP_012725226 308 WPEPQAgddggv-aareeaASAPdgfdvegfpgghvrVNRYSPRTLADALFYAGVFHAMHRTAHQsvpVTMANTVNLVNA 386
WP_014731620 281 WYKISAeke--------gmDKGI--------------VLLEEPYALKDGLFAAGIFVVMHRMADT---VQMANLAQMVNA 335
WP_014080192 296 WSMSDVqvqksv--edapwQTAP--------------AISEQIYTMEDALLFASMLMNFIKRADR---VKIACQSLLTNI 356
WP_025228952 296 WYRARHgehl-----dgkgKYAP--------------HLLEEQYNMEDVLVAAGFLNSFIRHADS---VKIANLAQIVNV 353
WP_055731628 295 WYHNRQqdhetirdrgkdwPIAP--------------AILEEPYNFEDALVAGAMLIALIRNCDR---VKIAAYAQLVNV 357
2VRQ_A       352 LQSVILTEGERMLLTPTYHVFNMFKVHQDAELLDTW---ESV---------ERT-Gp---------eGE----------- 398
WP_011958214 354 IAPILTRPDG-ILRQSIFYPFALFSRYASGDSLDLLvqaPTY---------ATRm-----------fGE----------- 401
WP_012003194 336 L-GIIKTNKTSLVLTPIYHVFDLFVNHTGRTRLDMKlacDTY---------SIKaksffegrisfslEN----------- 394
WP_012374638 394 IAPLVTNE-TSVLRQSIYYPYAWALQFAHGRVLDLEveaETYpihaeglraDFAr-----------eDQ----------- 450
WP_015924554 354 ISHIRTRNGGGAWVLPPYYTFLLFSKYGRGTSLVTSissPKY---------DSTd-----------fTD----------- 402
WP_012725226 387 nGLLAVRPGG-VVRQSTFHVWDLYQNHTGPVPLAADvsgPSR---------TARvRh----------GDhrrsdgefrts 446
WP_014731620 336 L-GMIKTKGDEMVLTPIYHAFDLFVNHTGRTRLNMAvdcDTY---------DINtrtfvegrnsfklNG----------- 394
WP_014080192 357 SSCIMTEKDGGVWVQPVYYPFALMAKYAHGVTLDTRytgDTY---------ACSt-----------fET----------- 405
WP_025228952 354 IAPIFTR-GDEMFLQTIFYPIEMYSRRRTGTSLQVQvqgPGY---------TSKr-----------yGK----------- 401
WP_055731628 358 LAPIMTDKNGKVWKNTIFYPIYYASKYGRGTALRGIihcDKY---------DSRd-----------fSD----------- 406
2VRQ_A       399 ---LPKVSVSASRa-ADG-KIHISLCNLDFETGASVDIELRGLNG--GVsATGTTLTS--GRIDGHNTFDEPERVKPAPF 469
WP_011958214 402 ---QPLIDAAASYdaGQG-KGAIFIVHRGRTEPLTLDLEWQGRAPy-RV-ASIYQVSG--SDPKAANTFDTPDVIGIRPL 473
WP_012003194 395 ---VPYIDGSATYdeRTK-TVSLALVNYKDGTV-KVTVDLSDFKTlsTQ-AVVHELTG--PDAFSKNDFENPNIVRPS-Q 465
WP_012374638 451 ---VPFVDVVATCdaARQ-RASVFLLNRDLENEREFVVDWRNPTPa-RV-LTALTLTG--GDLKAANTFDRPTLVAPQPL 522
WP_015924554 403 ---VPYLDAAATMd-DNG-DVTIFAINRSTEETLPLETELRGFENy-RV-ETHIVLTS--ANPKDTNTEECPNYVTPKNN 473
WP_012725226 447 pavVGQLDVSASTs-EDGrTLYVTGINRSATDDVNAQIVLDGVTLp-ET-ATVRRIGAgvDDLFAVNTMAAPDVVALSAP 523
WP_014731620 395 ---VPYVDGSATYdeEKQ-VLSVALINYYQREE-EVRLDLSGIEVk-KR-AVLNVLTG--SAPDEMNDFDNPDRIRVQ-K 464
WP_014080192 406 ---VPCVDHVLVYdgQKH-EVTVFFVNR-MEESAEATVSLQGMEPe-AV-LKSIALFH--EDKKATNQKEH-DCVTPVEL 475
WP_025228952 402 ---VNYLDSSAILn--GD-ELSVFLVNRNLNEPMEVEVRLADAPIe-SL-LNADFVAG--TDPKATNTFEHPHRVQSCTH 471
WP_055731628 407 ---VPYLDSVAVIsnDET-ELTIFAINKSLNENMVVNCDLRSFGRv-EM-TSHIALEN--NDVYDINSLEHPDKVVPKSK 478
2VRQ_A       470 RDFKLEGGHLNASLPPMSVTVLEL 493
WP_011958214 474 PGAPVVDGRFRLQVPPLSLTVAVV 497
WP_012003194 466 KIIQLAGKVFDIELQRLSLTILEI 489
WP_012374638 523 ELPAV-GAKMTFKLPARSYSVVQF 545
WP_015924554 474 GDAQIDGNKVLANLPRLSWNVIRL 497
WP_012725226 524 ASVSLAGG--VHTFPAHSISVLEI 545
WP_014731620 465 KVLDNCSTEMFLKLDPMSANVIEF 488
WP_014080192 476 ENVSCSGNEISVELVPLSFQMVQI 499
WP_025228952 472 DDIAIKNGVATISLPPLSVYAGTL 495
WP_055731628 479 PLTQ---NLNEIVISPLSWNMLRF 499
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