Conserved Protein Domain Family
DEDD_Tnp_IS110

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pfam01548: DEDD_Tnp_IS110 
Transposase
Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.
Statistics
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PSSM-Id: 460249
Aligned: 91 rows
Threshold Bit Score: 103.848
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015617670    12 VGIDIGARQNVVSAInFDQEFLIKmEPVPNTQfgaEQLESMLVKvleKNTFKT-VIIGLEST-SFYGVHIANFLSSSERL 89  Clostridium p...
BGI:SBI_08608    7 CGIDWAEDHHDVAMVdETGTLLAK-RRIGDDA---DGYRLLLGLl--AEYGDT-SEAPIPVAiETSRGLLVAVLRTGKRP 79 
jgi:Psed_4336   24 AGVDWSWSEHAVCVIdDTGAALER-LTVRHTA---AGLRKLVTA---LHQHQV-AGVAIERG-DGP---VVAALLEAGLT 91 
WP_013678050    10 VGIDWAATNHAVCVLdSSGRRVTG-FGVEHTA---AGFTGLIRRl--AKLGEP-GGVPVAIE-RPDGRLVDA-LLAAGYP 80  Pseudonocardi...
jgi:Namu_3864   10 VGIDWAAQTHAVCVQdAAGKITAQ-FTIEHTA---DGFATLLARl--GRLASDpMQVSVALE-RPDGRL-VDALLEAGYP 81 
WP_013494820     4 VGIDQA-SQHHDVCLaSAGQAPSY-LRVPNDA---DGLEELLAAi-rRREPDP-AQVHVAIE-GSGQGLFVAALLATGFQ 75  Thermaerobact...
jgi:Sulac_2224   5 VGWDWADGHHDVVVQdQPGHTLWA-GQVAHTR---EAL-DLLEGr-lLDWAHH-VRTDVHVV-IETSQ---GLVVDWLIT 73 
jgi:Nther_1112   4 VGIDWADTKHDILVMsGDGRELDN-FTIQHSQ---DGFETLETKl--LKHDDN-PENFCCLI-ETKHGLLTQYLLENNFT 75 
WP_015050459     4 VGIDWADLHHDVAVLdEKGQELKY-FTVPHNR---EGLEQLKQTl--LGINPD-PESFACLV-ETKNGLLVQFLLEAGFP 75  Thermacetogen...
Q025Y1          15 IGLDWADKKHNWTMQtADGKRSRG-ELIHTPE----AIDAWAAEl--AQRFGG-RPVAITLE-QARGALIATLSKYGHLH 85  Candidatus So...
WP_015617670    90 MPYKPYvycLNPKEVAny-kDS-F-N-S--LDKNDSIDSFVIADFAR--VGRIHTEPWRGSQYLALQRLTRHRLHIVECL 161 Clostridium p...
BGI:SBI_08608   80 IYAINP---LAAARYR----DR-HgV-S--RKKSDPGDALVLANILRtdMHAHRPLPADSDQARAIAVLARAQQDAVWNR 148
jgi:Psed_4336   92 VFLIVP---QHVTALR----SR-Y-TtT--RNKDDRFDAYLLADVLRtdRRRLTPLTVDTDATVGLRMLIRTRADLIKAR 160
WP_013678050    81 VVAVKP---NAIKTWRe---GE-V-I-S--GAKSDPGDAHVIAEYLRlrAHRLRAATPLSEDTRALRLVSRTRSDLVAAR 149 Pseudonocardi...
jgi:Namu_3864   82 VVPVSP---NAIKTWR----DGeV-L-S--GAKSDAGDAAVIAEYLRlrSHRLRPATPFTPATRALRTVVRTRDDIVAMR 150
WP_013494820    76 VYPVNP---KAVDRYRd---RL-S-P-A--GSKDDRRDALVLAEILRtdRHRLQPLRLESDTLRQLRVVYSHHQTLVEER 144 Thermaerobact...
jgi:Sulac_2224  74 TGFWVY---PVNPKVS----DA-R-R-KpsGAKTDRLDAAILARLGWtdRDQLRPLRPADEAWVELRQLTRIDEALTRQA 143
jgi:Nther_1112  76 VYSVNP---KLVDAR------R-K-A-S--GAKTDFIDAKILANMGRseLHDLHKLEPDSEHIQELKVLTRDQDALIQES 141
WP_015050459    76 VYPLNP---KVVDYRR----K----P-S--GAKSDPIDARLLASIGRsdLAQLKRLKPDTELVCELKILTRDQDSLIQES 141 Thermacetogen...
Q025Y1          86 ---LFI---VDPSRLNyyrkSV-S-P-S--GAKSDLVDGDLILDFQLkhPELVRYLAPDTVETRSLQFLTEQRRAVVNQH 154 Candidatus So...
WP_015617670   162 TREKTYMLSnvFLKFSGF 179 Clostridium pasteurianum
BGI:SBI_08608  149 QQLVNQVRS--LLREYYP 164
jgi:Psed_4336  161 VAAHNQLRA--HLQLAHP 176
WP_013678050   150 VAAGNQLAA--LLDTAWP 165 Pseudonocardia dioxanivorans
jgi:Namu_3864  151 TATANQLTA--LLDAHWP 166
WP_013494820   145 TRLLNQLIA--CLRTYYP 160 Thermaerobacter marianensis
jgi:Sulac_2224 144 TRLTNQLLA--ALKSYYP 159
jgi:Nther_1112 142 TRLTNRLIS--TLKEYYP 157
WP_015050459   142 TRLNNKLIA--CLKEYYP 157 Thermacetogenium phaeum
Q025Y1         155 TRQVQILTH--WLKQVFP 170 Candidatus Solibacter usitatus Ellin6076
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