Conserved Protein Domain Family
Rnh1

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COG3341: Rnh1 
Ribonuclease HI-related protein, contains viroplasmin and RNaseH domains [General function prediction only]
Statistics
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PSSM-Id: 442570
Aligned: 90 rows
Threshold Bit Score: 152.315
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012864161   1 MAKKFYAVRQGRVP--------GVYTTWSDCEKQVKGYGGAIYKSFSTEVEARAFVENSGLSLSDFMSakkselklpqev 72 
NP_349162      2 AKKNFYAVKEGRKT--------GIFKTWDECVQYVSGYPNAKYKGFVTREEAEVYLEGCVNLDINNEEpvpkfnqniplk 73 
WP_005812143   4 HKPKFYAVRAGRDK--------GVFSSWEECRKAIYGFSGAVYRSFPTLEEAQAWFKGETLSDPLKAEd----------- 64 
WP_014545081   2 PKQKFYAVKSENEK--------KIVTTWDECLKLTHGVKGVLFKSFGSREEAQAWLDGMEAPAP---------------- 57 
WP_013386137   4 KKMKFYAIRSGQDPitkksvggLILNSWDQAKEYVTGVKGAEYKSFEDEDAAKSFLQGDGSQVTk--------------- 68 
WP_014185625   2 VKKNFYAVKKGFKI--------GLFNTWLECQASVKGYKGAVYKGFEKKTEAVAWLNSEEIRSDp--------------- 58 
WP_040108895   4 SKAKFYAVLAGHKP--------GIYLTWAECQEQTKGFKGAKYKSFPTREEANLFMKGEVVVTSAEKKkedyivaa---- 71 
WP_072694362   1 MAKKYYAIKKGKNP--------GIYTSWAEAQQQVSGFSGAEFKSFSSKNEAENYLSPSKQAIE---------------- 56 
WP_062467981   1 MASKFYAVKKGRKP--------GIYLTWPEAQKQISGFSGAQFKSFPSKEEALDFINPPEESQI---------------- 56 
WP_051177655   3 IKKKFYAVKKGYKT--------GIFDTWAQCQKQTQGFKGALFKSFATLEEAKNYLNDDEAVNI---------------- 58 
WP_012864161  73 kfksinsrpivssssiqskvsasvvkPDFTTPN-YMVAyiDGSYNKETNT----VGAGGVIFLNGKrkt-fsFSSTDKRY 146
NP_349162     74 sgydi----tpikskakvkssktfvePDTIKEEyEFIAfvDGSYDKLKKL----YGSGVIVLGENDefk-vySTAGR-DT 143
WP_005812143  65 -------------------------dSLRDDRT-EYDVytDGSYVNGQ------YAWAYAFVKDGKvhyedaDVGKNPAA 112
WP_014545081  58 --------------------------------D-GIRVfvDGSFSPGFGP----AGWAFVVTEDDNel--arGSGITAFD 98 
WP_013386137  69 --------------------------ALEMQPD-VLYCyvDGSYNNNIPN----YSYGICAVLNEKvvhiqnGQGNNPDA 117
WP_014185625  59 --------------------------SAHLEGi-DFEVytDGSYVNGR------YSYGYVFIKDGEivleskGVGEDLEA 105
WP_040108895  72 ------------------keaeryaiEVSKEAG-TVAIytDGSRKQKPESedfvFGCGVAIIDGGDiqhsfgKASDYKPY 132
WP_072694362  57 ----------------------------VSDED-TVTAyvDGSFDKLNNR----YSYGVVMLKNNTvlatlnNADNDPKY 103
WP_062467981  57 ---------------------------DWSASD-TIEAyvDGSFDRVNNR----YSYGVVIVKNDQivttfnQAAADPRY 104
WP_051177655  59 ---------------------------MEKDDD-RYYIyvDGSY--INGQ----YSWGMAIYHQGKlidtfnGIGKSKDA 104
WP_012864161 147 TSFWNVAGELLAAMHVMKYAVDSG--ISeCSLYYDYMGIEMWATKGWKRNNELTQEYSAFYDSI---KNRVRVYFHKVAA 221
NP_349162    144 WDQWNIVGELEATKLALTKAKEFG--TKnVAIYHDLKNIALWATGEWKAKNEFTQGYVKFIEDI---SKELNIYFVKVKG 218
WP_005812143 113 ATMRNVAGEIAAALYAVKKASQLG--VK-IRILHDYAGIAFWATGEWKAKNEFTQAYAKLMNQY---RGIYS--FEKVKA 184
WP_014545081  99 AESRNIDGEVMASFQAMRWLDAHD--MK-GVICHDYEGIARWAKGEWQAKSNIAKMYVAAAKPY-----LHRVQFEKVAA 170
WP_013386137 118 IEMQQIGGELLGAITSLQYAKNNR--HPqVVILHDYLGVAHHATGFWKRTNKYSERYFTWMQNFfssNTDMKVNFVKVKA 195
WP_014185625 106 ASMRNVAGEIAAVRHAVEKAISIQ--AR-IRIYHDYSGIALWVTGEWQAKNKFTQAYAKFMRAH---KEVYE--LKKVAG 177
WP_040108895 133 AVYENVAGELLGAGEAFRYLQNNRpdVKkVVFFYDYQGIGHWAQHTWKAKNDMTQRYVAFMDTFr-qETGVEIDFRHVKG 211
WP_072694362 104 VESFQIAGECFGSLNAVKWAKNNG--YKkVVIHYDYLGIEMWATEKWRTNKAVSKDYVAYFKQL---SQNIEVEFKKVKA 178
WP_062467981 105 TESFQIAGEVFGALAAIRWAIQAG--YAaINIRYDYLGIEQWARGLWKTNKPVSKDYVQAFKEL---APHITVRFQKEKA 179
WP_051177655 105 SELHNVAGEIEGAMEAAKWAAANG---DkVVICHDYIGLSEWALGRWKTNKELTKHYADFMKPY---LDLVS--FKKVAG 176
WP_012864161 222 ht-gDTYNEMADALAKQ 237
NP_349162    219 hsyeSKYNDLADEAAKK 235
WP_005812143 185 hs-gNEFNDYVDMKAKS 200
WP_014545081 171 ht-gVKWNELVDKLAKE 186
WP_013386137 196 ht-gNNFNEIADGLAKL 211
WP_014185625 178 hs-gDKFNDYVDGLAKE 193
WP_040108895 212 hv-gNKFNEHVDEIAGR 227
WP_072694362 179 hs-gVEFNELADQLAKD 194
WP_062467981 180 ht-gVAYNEMADQLAKQ 195
WP_051177655 177 ht-gVEGNELADKLAKQ 192
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