1YMQ,2PQ0,3R4C,3FZQ


Conserved Protein Domain Family
HAD_HPP

?
cd07517: HAD_HPP 
Click on image for an interactive view with Cn3D
phosphatase, similar to Bacteroides thetaiotaomicron VPI-5482 BT4131 hexose phosphate phosphatase; belongs to the haloacid dehalogenase-like superfamily
Bacteroides thetaiotaomicron VPI-5482 BT4131 is a phosphatase with preference for hexose phosphates. In addition this family includes uncharacterized Bacillus subtilis YkrA, a putative phosphatase and uncharacterized Streptococcus pyogenes MGAS10394 a putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Statistics
?
PSSM-Id: 319819
Aligned: 18 rows
Threshold Bit Score: 243.284
Created: 12-Mar-2008
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:based on Bacteroides thetaiotaomicron Bt1666 and BT4131, and on other haloacid dehalogenase (HAD) superfamily members with structure
  • Structure:3R4C: Bacteroides thetaiotaomicron Bt1666 binds Mg2+ and sulfate ion in the active site
  • Structure:1YMQ: Bacteroides thetaiotaomicron BT4131 binds Mg2+ and sulfate ion in the active site

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1             #####                              ###                                     
1YMQ_A         3 KALFFDIDGTLVsfethripsSTIEALEAAhakGLKIFIATGRpkAIINNLselq-drnLIDGYITMNGaYCFVGee--v 79  Bacteroides the...
3R4C_A        13 KVLLLDVDGTLLsfethkvsqSSIDALKKVhdsGIKIVIATGRaaSDLHEIda-----vPYDGVIALNGaECVLRdg-sv 86  Bacteroides the...
NP_266893      4 KAVFFDLDGTLFtstr-gvatSTRKAIQELrqkDIFVGIATGRgpAFVMPLle----dlDLDFAVSYNGqYIFTPke--v 76  Lactococcus lac...
NP_274668      4 KIVFFDIDDTLYrkytdtlrpSVKTAVAALrgkGILTALATGRslATIPEKvrdmmaeaGMDAVVTINGqFALLHgk--t 81  Neisseria menin...
NP_267048     12 KIIFFDIDDTLRvkdsafmpeSITEVFYKLrekGIMTGIATGRnlFGVVPEvr----alKPDFYVAINGaYVENAqtgev 87  Lactococcus lac...
Q5XAQ1        17 KMVFFDIDDTLRvkdtgympeSIQRVFKALkakGILVGIASGRarYGVPQEvq----dlHADYCVKLNGaYVKDDak-ti 91  Streptococcus p...
YP_003028144  13 KIVFFDIDDTLRvkntgyipeSIQQVFKSLkekGILTGIASGRtpYGLVPEik----alKPDFFAMINGsYVEDAkg-qv 87  Streptococcus s...
NP_814982      6 AITFFDLDGTLLdgts-qitpEITAAVAALkdnQILPLIATGRtlCEIQPImk----asGIDSAIVMNGqFIHYEgk--t 78  Enterococcus fa...
NP_465732      5 GICFFDMDGTLLnses-kvldTSLQALDKLrenNVIPVIATGRtlIEISHQmk----itGIESAVMMNGqMAIFEge--k 77  Listeria monocy...
YP_036223      3 KVVFFDVDGTLLseidrsmheSTKEAIRRLidkGIHVVVTTGRp-YSLCSQfn----alGINTIISANGaHIKCGet--v 75  [Bacillus thuri...
Feature 1                                                                                        
1YMQ_A        80 IYKSAIpqEEVKAMAAFCEKkgvPCIFVEehnisvcqpnemvkkifydf--------------------lhvnviptvsf 139 Bacteroides the...
3R4C_A        87 IRKVAIpaQDFRKSMELAREfdfAVALELnegvfvnrltptveqiagiv--------------------ehpvppvvdie 146 Bacteroides the...
NP_266893     77 IFQNPLeqKSLKNLINYATEnhsDISLGTahgvngsgllkfgetrlasflsgvlpsgtsgvarnsfkhiirrvlpqnsnl 156 Lactococcus lac...
NP_274668     82 VREVPMdaGLMGRVCAHLDGlgmDYAFVGgegiavsalsecvcralkhi---------------------asdffadkdy 140 Neisseria menin...
NP_267048     88 LYKNTFskELIEEIITWLKNeqsGYSFVAadslkiskwdkiasdaigp----------------------vyseleenpn 145 Lactococcus lac...
Q5XAQ1        92 IFQAPIpaDVVVAYKKWADDmgiFYGMAGrheavlsarndmisnaidn-----------------------vyaqlevcp 148 Streptococcus p...
YP_003028144  88 VYHQPMpqNLVESVLNWAKEigiEYGMLSsqkgtlsartdrisqvidl-----------------------iyegletkp 144 Streptococcus s...
NP_814982     79 IYSDEFttEECVSLHEHVKQrghELAFYNerrifctghtgtvkqaydyi--------------------hsavpeidptg 138 Enterococcus fa...
NP_465732     78 VYEDVIdaGLLEQLTEEAKSqnvEVCYYNdkrigatastpvvkahyd------------------------flgepmpev 133 Listeria monocy...
YP_036223     76 IHKSVLssEIVHDLSEFAALhghGVSYFTedfamngiaahngrvmqals--------------------etlnlekypek 135 [Bacillus thuri...
Feature 1                                                           #                     ##  ## 
1YMQ_A       140 eeasnkeviQMTPFit-eEEEKEVLPsi-ptCEIGRWyp-aFADVTakgdtKQKGIDEIIRhfgikleeTMSFGDGGNDI 216 Bacteroides the...
3R4C_A       147 emferkeccQLCFYfd-eEAEQKVMPll-sgLSATRWhp-lFADVNvagtsKATGLSLFADyyrvkvseIMACGDGGNDI 223 Bacteroides the...
NP_266893    157 adneeeviyQAMMVat-rNETARLQEaf-peLLVTRSnp-ySVDLIsksggKLPGIQRLGEhygftldqVMCFGDSENDL 233 Lactococcus lac...
NP_274668    141 fsskpvyqmLVFAEen-eMPLWSDIVer-egLKTVRWhe-eAVDLLpagasKTDGIRSVVEalgwemadVMAFGDGLNDV 217 Neisseria menin...
NP_267048    146 yyktneiyqMLTISdh-dDQLELPEIls-dkIRLVRWhp-nSSDIVpmegsKAIGCQKVLQelglkaenMMNFGDGLNDR 222 Lactococcus lac...
Q5XAQ1       149 dyneyhdvyQMWTFedkgDGLQLPAEla-ehLRLVRWhd-nSSDVVlkgtsKALGVSKVVDhlglkpenILVFGDELNDL 226 Streptococcus p...
YP_003028144 145 tfykendiyQLLTFekdgHEVELPEElq-aeLRSVRWda-iSSDIVlkgssKATGVAKVVEklglkpenVLVFGDGLNDI 222 Streptococcus s...
NP_814982    139 yendavnmmLVLSQhg-dDDEYYYERfp--eLTFYRNgp-fSIDIVrkgvsKGSGVKNLFNtlglngipTYAFGDGINDL 214 Enterococcus fa...
NP_465732    134 rpnmykeetINMALll-lETGDDYFPerfpeLQFVRNtp-fSNDVLrkggsKAVGISKLLEvmgyqdvpTYAFGDGMNDL 211 Listeria monocy...
YP_036223    136 srdlseeiyCLCLYad-eIEAQKFLEry-paLTFERFhgyvMNVLEdnkvsKVTAIQKVLEhlnickseAIAFGDGRNDI 213 [Bacillus thuri...
Feature 1                                                   
1YMQ_A       217 SMLRHaAIGVAMGQAKEDVKAaADYVTAPidEDGISKAMKHFG 259 Bacteroides thetaiotaomicron
3R4C_A       224 PMLKAaGIGVAMGNASEKVQSvADFVTDTvdNSGLYKALKHFG 266 Bacteroides thetaiotaomicron
NP_266893    234 TMISGvGYGIAMGNAVPEVKNiATYITDTnnQDGIAKALAYYG 276 Lactococcus lactis subsp. lactis Il1403
NP_274668    218 EMLSEvGFGVAMGNGEQAAKEaAKYVCPSvdEDGVLRGLQDLG 260 Neisseria meningitidis MC58
NP_267048    223 ELFDFaGLSVAMKISHPEILEkADYITDSveNDGILKALQALK 265 Lactococcus lactis subsp. lactis Il1403
Q5XAQ1       227 ELFDYaGISIAMGVSHPLLQEkADFITKKveEDGILYALEELG 269 Streptococcus pyogenes MGAS10394
YP_003028144 223 ELFDYaGISIAMGHSHPELQKhADYITKKveEDGIFDALEKLG 265 Streptococcus suis BM407
NP_814982    215 ALFEAcDYGIAMGNAREELKEkATFISTKntENGIVNGLKKFD 257 Enterococcus faecalis V583
NP_465732    212 EMFGAvDYAIAMENAVPLLKEkATFVTKDnnSDGIMLGLKQFD 254 Listeria monocytogenes EGD-e
YP_036223    214 EMLEYvGLGIAMGNGGEGLKIrADFVTKKasEGGILFALEKHY 256 [Bacillus thuringiensis] serovar konkukian str. 97-27

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap