5LM7,1EYV


Conserved Protein Domain Family
NusB

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COG0781: NusB 
Transcription antitermination protein NusB [Transcription]
Statistics
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PSSM-Id: 440544
Aligned: 831 rows
Threshold Bit Score: 60.5457
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5LM7_B        13 ECAVQALYSW-------QL-S-QN---DI-AD-----V----EYQ-FL--AEQ-D-VkD--V-----DV---LYFRELLA 55 
NP_229312      7 LLAYRLLRKY-------EK-E-KF---IS-RE-----D----VDS-VL----S-F-LdD--R-----DR---RFFKELVW 47 
AAM01659       8 ELTARVFVEW-------EE-T-RR---SL-RE-----C----VKK-VL--------LnEgvR-----DHrvwGTIHAYCF 51 
WP_012993375  16 EAAAQVIYHC-------LAlHdMA---SF-DP-----V----LRQ-TV------NfLsL--P-----ER---NLAVAIVY 58 
WP_006928828  10 ALAYEVLFKF-------EK-T-FD---RL-DQ-----L----TER-AL--EQN-E-LsG--R-----ER---RFFKNLTS 52 
WP_114984722   9 LASIRTLEKF-------EH-S-NR---ID-MD-----L----LN----------K-LnR--Q-----ER---QQANEYVQ 45 
WP_013637735   8 LIAIKILNRF-------EK-D-KK---LK-EH----------IEK--F---TS-R-LhP--Q-----DR---AFIREIVS 47 
WP_013909121  11 AVALKILIRW-------EK-G-KP---LL-DE-----I----LSQ-VL--TKSvL-PdE--R-----DR---ALVGELVN 54 
WP_013906672  11 AMALKVLIRW-------ET-K-KP---LL-DE-----V----LNE-VL--EKSvL-PdP--R-----DR---AFVSELIN 54 
AKH32749      11 KIWIMSLYEQlaaqqaqEq-S-NNydfQLfEDvsltmVqmvyMAErFFtnED--K-TkE--QitdmvDV---GFLKPMIQ 80 
5LM7_B        56 GVATNTAYLDGLMKPYL-SRLLEELGQVEKAVLRIALYELSKRsDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAP 134
NP_229312     48 GVVRKEELLDWYINQLL-KK--KDIPPAVRVALRMGAYQLLFMnSVPDYAAVSETVKLVKnenfkklvnavlrrlrtvpe 124
AAM01659      52 ELMKRLRTVDAFLEATIrNAKLFDLDPWVRNALRVGTFEMKFN-DVKPAIATNEAVKIVVECvgegparfvnavlydver 130
WP_012993375  59 GTMTYLYTIDYVLGKHC-KIGLEKLDPWLKSVLRTAVWQLRYSrNLPETAVVNECCKLVKKYRhqgmvdfanavmraevs 137
WP_006928828  53 GVVRHRLYLDWIGSQLY-KGRYKKLLIKFKVLLRLALYELIFLtAIPEHATLNEYVGLTKKklnnfqakllngllrnylr 131
WP_114984722  46 GILRRKSYLDFLISRYS-SVDIAGMDAFFKNILRIGIYDLLFMdSTPDYAAINENVEIAKTqisarsgdlanailrkiqr 124
WP_013637735  48 GTVRFLRLLDFSIEKAT-GKNLKRQKNTVRNSLRVIAYQIFFT-NVPPYAALNETVEAVKkilgkkaagfvnaiskkiig 125
WP_013909121  55 GVVRHLYYIDFVISRVS-LHPLEKMDVEVRNILRLSTYQIIYT-RIPERVAIAEALKILSHrkrgdwikglvnailhkia 132
WP_013906672  55 GVVRHLVYLDYVLSRVS-RKPLDKMDPEVRNALRLGAYQIFFT-RVPVQVAVAETIKLVKPrrgqwivnfvnavlrelar 132
AKH32749      81 QWKTYYPAVIAAVNNNStSFGFEKMDPIDKAIFLGGGVEYLVh-KTPLKIIMNEMIEIAKRYGDEGAPKLINGIGHKVME 159
5LM7_B       135 VIRP 138
NP_229312    125 pkel 128
AAM01659     131 lels 134
WP_012993375 138 hpvc 141
WP_006928828 132 qket 135
WP_114984722 125 etne 128
WP_013637735 126 fdyk 129
WP_013909121 133 enkd 136
WP_013906672 133 rkde 136
AKH32749     160 ELTV 163
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