Conserved Protein Domain Family
PIA_icaB

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TIGR03933: PIA_icaB 
intercellular adhesin biosynthesis polysaccharide N-deacetylase
A common motif in bacterial biosynthesis of polysaccharide for export is modification that follows polymerization. This model describes a subfamily of polysaccharide N-deacetylases that acts on poly-beta-1,6-N-acetyl-D-glyscosamine as produced by Staphylococcus epidermidis and S. aureus. The end product in these species is designated polysaccharide intercellular adhesin (PIA), and this gene designated icaB (intercellular adhesion protein B). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Cellular processes, Pathogenesis]
Statistics
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PSSM-Id: 188448
Aligned: 5 rows
Threshold Bit Score: 413.452
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ABU63628  40 NSALALNYHRIRDDNWFKNTLFTLSNSKEIKNYSISKEAFEAEIKWLKAHGAHFLTEKEFQHYKEKGKFPPKSVWISFDD 119 Staphylococcus lugd...
Q9RQP7    43 NSALALNYHRVRKANFLNNFIYFFSSSKEIKNYSVSQSQFESQIKWLKSHDAKFLTLKEFLYYKKKGKFPKRSVWINFDD 122 Staphylococcus aure...
Q6TYB1    42 NSALALNYHRVRKKDPLNDFISLLSGSKEIKNYSVTDQEFKSQIQWLKAHDAKFLTLKEFIKYKEKGKFPKRSVWINFDD 121 Staphylococcus epid...
AAK18069  42 NSALALNYHRVRKNDPLNDFITLFSSSKEIKNYSVTDKEFESQIKWLKEHDAKFLTLKEFLKYKKKGKFPKRSVWINFDD 121 Staphylococcus caprae
BAH17388  28 KQCLALNYHRLIKDDLFTNVISLLTSNKELNFYSIKDSEFEAQMDWLVAHDATFVTEETLIQDKQRGKFPERCVWVNFDD 107 Macrococcus caseoly...
ABU63628 120 MEQSVYDNANPIIEKYKIPVTGFVITGQIGNENFHNLNLSDLSTLKILNHSKYWTFSSHTDNLHSLTKDRKAIMTSTPDD 199 Staphylococcus lugd...
Q9RQP7   123 MDETIYENAYPILKKYKIPATGFIITGHVGEENFHNLDMISKKELKEMYKTGLWEFETHTHDLHNLSKNNKSKLMKASEA 202 Staphylococcus aure...
Q6TYB1   122 MDQTIYDNAFPVLKKYHIPATGFLITNHIGSTNFHNLNLLSKKQLDEMYETGLWDFESHTHDLHALKKGNKSKFLDSSQS 201 Staphylococcus epid...
AAK18069 122 MDQTIYQNAFPILKKYKIPATGFVITGHIGQQNFHNLDMMTQSQLSEMYRTGLWDFETHTNNLHSLKKENKSKFLEASNP 201 Staphylococcus caprae
BAH17388 108 MDQSALKLAHPILKERGIPATGFVITGHVGDDSFHNLKLIDLKGLKEMEASGIWQFNSHTHDLHNLKRSTSDLVKHSSKA 187 Macrococcus caseoly...
ABU63628 200 KLKDDIVKSNLFIHKQFHKNNDSIAYPYGEVSNQNIKVLKKEGIRYGYTLEDKAVKPSENNYRIPRVLMNEDAFNKLIKK 279 Staphylococcus lugd...
Q9RQP7   203 TIIKDLNKSEKYLTKNFKKSQKTIAYPYGLMNDDKLPVIKKAGLKYGFSLEEKAVTPNSNDYYIPRILISDDAFEHLIKR 282 Staphylococcus aure...
Q6TYB1   202 VASKDIKKSEHYLNKNYPKNERALAYPYGLINDDKIKAMKKNGIQYGFTLQEKAVTPDADNYRIPRILVSNDAFETLIKE 281 Staphylococcus epid...
AAK18069 202 AATKDIEDSEDELNSKFGKNQHAIAYPYGLINNSKIQASKDAGMKYGFTLSEKAVTPNVNNYKIPRILVSNDAFETLIKK 281 Staphylococcus caprae
BAH17388 188 GA--DIDRSVKYLDQHFNKKATSLAYPYGQYDDAVIDILEHSAIRHAYVLKETPIHVDDDNYTLPRILVSRDSFEKVVKN 265 Macrococcus caseoly...
ABU63628 280 WDGFA 284 Staphylococcus lugdunensis
Q9RQP7   283 WDGFH 287 Staphylococcus aureus subsp. aureus NCTC 8325
Q6TYB1   282 WDGFD 286 Staphylococcus epidermidis
AAK18069 282 WDGFN 286 Staphylococcus caprae
BAH17388 266 WKGFN 270 Macrococcus caseolyticus JCSC5402
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