Conserved Protein Domain Family
MFS_MefA_like

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cd06173: MFS_MefA_like 
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters
This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
Statistics
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PSSM-Id: 340863
Aligned: 130 rows
Threshold Bit Score: 108.857
Created: 8-Jan-2008
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of MFS transporters with bound substrates, substrate analogs, and/or inhibitors
  • Comment:since MFS proteins facilitate the transport of many different substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides, the residues involved in substrate binding may not be strictly conserved among superfamily members
  • Comment:the substrate binding site or translocation pore has access to both sides of the membrane in an alternating fashion through a conformational change of the MFS transporter

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  ##  ##  #                                #                            
P95827        11 FYTIWAGQAVSLITSAILQMAIIFYLTek-tgSAMVLSMASLLGFLPYAVFGPAIGVLVDRhdRKKIMIGADLIIAAAGS 89  Streptococcus
O31561        12 LMTLLASQTISSLGDWLHILAVLTLAAfqlhaSPLDMSLLMMSFALPVIVLGPVSGLLADRfdRKTIMFLSEIGRALTVI 91  Bacillus subtilis
P64784         9 AFLILFATLMAAAGDGVSIVAFPWLVLqr-egSAGQASIVASATMLPLLFATLVAGTAVDYfgRRRVSMVADALSGAAVA 87  Mycobacterium b...
O32859         9 LLLILFAALTAGAGNGITIVAFPWLVLqh-ngSALDASIVAMAGTLPLLVATLIAGAAVDYlgRRRVSMISDLLSALSVA 87  Mycobacterium f...
YP_500904      2 TKYFFSSSFLLFLGNWIGQIGLNWFVLtt-yhNAVYLGIVNFCRLVPILLLSVWAGAIADKydKGRLLRITISSSFLVTA 80  Staphylococcus
YP_004888503  12 FRNFFLADIISGFGVGLTTVGANWYMLqs-thSNKLVGMYLTVNVLAGFLMSPLAGSLTDRfsRKQVILWTFLGRALPMS 90  Lactobacillus p...
O31600         9 VFALLLSQSFQSLAGVLVTIVLMVRIYqm-tdSVFLAGLILSFMSFASIAASFCVSPVLRIlgFKKVLAGANLLRAVFII 87  Bacillus subtil...
O34440         5 YYSILFSQTTTNLGFSLYTMVVISFLFkm-tnSTTIASMVTLISIIFRIFGSAILPLITIRlkLPLTIIISQLIQMLLLI 83  Bacillus subtil...
NP_359574      5 FVKLLVSQLFANLADIFFRVTIIANIYii-skSVIATSLVPILIGISSFVASLLVPLVTKRlaLNRVLSLSQFGKTILLA 83  Streptococcus p...
YP_036219     10 LTYYLGSKICITLADIVYIMIITTHMYit-tkSATLTALFPLLQVITNLIANTSAPLIMNRfsSYSLLFTLQWSKTALLF 88  Bacillus thurin...
Feature 1                                     ## ###  #                         #  ##  #         
P95827        90 VLtivafy---melpvwMVMIVLFIRSIGTAFHTPALNAVTPLLVPeeq------ltkCAGYSQSLQSISYIVSPAVAAL 160 Streptococcus
O31561        92 SCvyvs--------elwQLYVLLSVQSCFSSLFLPAKNGKLKELAPeah------iqqAVSVSSIIDNSSKIFGPALGGT 157 Bacillus subtilis
P64784        88 GVplvawgyggdavnvlVLAVLAALAAAFGPAGMTARDSMLPEAAAragw----sldrINGAYEAILNLAFIVGPAIGGL 163 Mycobacterium b...
O32859        88 AVpvlali----fgvdaVNVAVLAVLAGLGAFFDPAGMTARETMLPeaagragwtldhANSVYEAVFNLGYIVGPGIGGL 163 Mycobacterium f...
YP_500904     81 ILcvltysf--taipisVIIIYATLRGILSAVETPLRQAILPDLSDkis------ttqAVSFHSFIINICRSIGPAIAGV 152 Staphylococcus
YP_004888503  91 LIalvigy---sgfnlwAMYGLAILTGAGWITYMAASRSYVQAVLPeel------lgtANSFIEVSLQVGMFAAGAISGI 161 Lactobacillus p...
O31600        88 LMaysvthh--gqaffwITLLFVFCFSFAGAFFQPARFALLPIIVPkkq------yvkANGVISLSNQLFLTAGWGLGGL 159 Bacillus subtil...
O34440        84 CLfyallrt-ysnqtliLVFIIISCISFFNGWFSPLKSAIIGEIISpdr------rvkANGLLSTVDQTFQFVGWSLGGL 156 Bacillus subtil...
NP_359574     84 ILvgmftvm--qsvaplVTYLFVVAISILDGFAAPVSYAIVPRYATdl--------gkANSALSMTGEAVQLIGWGLGGL 153 Streptococcus p...
YP_036219     89 LLmilfpv---lstnivALFIFIFFISLCSGWSAPLLYGILPRLTPken------lvkVNSIFSFFAQIAQAAAYTFTSV 159 Bacillus thurin...
Feature 1                                                                               #  ##  ##
P95827       161 LYsv-weLNAIIAIDVLGAVIASITVAIVRipklgdrvqsldpnf---iremqegmavlrqnKGLFALLLVGTLYMFVYM 236 Streptococcus
O31561       158 LIaa-fsIHSVFYINAGAFFLSAVILFFLPrdaflqkantpqektaaltsikeglqflkrmpLLLTGLLTACVVLFVLQI 236 Bacillus subtilis
P64784       164 MIat-vgGITTMWITATAFGLSILAIAALQlegagkphhtsrpqgl-vsgiaeglrfvwnlrVLRTLGMIDLTVTALYLP 241 Mycobacterium b...
O32859       164 MIat-lgGINTMWVTAGAFCCSILAISVLRlegagapdrsvlteav-lagiveglrfvwytpVLRTLAIVDLVATGLYMP 241 Mycobacterium f...
YP_500904    153 ILav-yhAPTTFLAQAICYFIAVLLCLPLHfkvtkipedasry------mplkviidyfklhMEGRQIFITSLLIMATGF 225 Staphylococcus
YP_004888503 162 ILny-tgFMIILVINIIMFFVAVLLVAAIKadspvnkginees------agfsngleyiwkhKSILSMGIISILPLIVTQ 234 Lactobacillus p...
O31600       160 LTya-vpFELVVGAAICLFVLSGASISVLHvneeeaagtaet--------asvrsiwkdlmiIPIVRDITVMDMLEALAG 230 Bacillus subtil...
O34440       157 IIaflgeGYTIILTIFLLFTSLLSLLFCLPhghansvireknsp-----nksivsgwrylfsQKKLRTIIIMDLIESWAG 231 Bacillus subtil...
NP_359574    154 LFat-igLLPTTCINLVLYIISSFLMLFLPnaevevlesetnl-------eillkgwklvarNPRLRLFVSANLLEIFSN 225 Streptococcus p...
YP_036219    160 IVlligaTSTLMMNNILMIFGCVALHFSLRsihneqviepsssk-----aaallegwkllfqNPALRTVTCMDLIETFAG 234 Bacillus thurin...
Feature 1        #  #                         #   #                                              
P95827       237 PINALFPLIsmdy--fngTPVHISITEISFASGMLIGGLLLGLfgn---yqkRILLITASIFMMGISLTISGLlpqsg-- 309 Streptococcus
O31561       237 GDSQAIILIrsf---sgaPPELAGWCMAVSGAGMLLTAAITGRrri----tsYLLYFSAGTLLLGLATGGAPFlsgmgia 309 Bacillus subtilis
P64784       242 MESVLFPKYftd----hqQPVQLGWALMAIAGGGLVGALGYAVlai---rvpRRVTMSTAVLTLGLASMVIAFlppl--- 311 Mycobacterium b...
O32859       242 MESVLFPKYftd----rnEPTELGWVLMALSIGGLLGALGYAVmsr---ymsRRATMLTAVITLGVAMTVIAFlppl--- 311 Mycobacterium f...
YP_500904    226 SYTTLLPVLtnkv--fpgKSEIFGIAMTMCAIGGIIATLVLPKvlk---yigMVNMYYLSSFLFGIALLGVVFhniv--- 297 Staphylococcus
YP_004888503 235 LFNVSSPDYvstv--lraNSVVYGFVDMGYGIGGLAAGLITGYlin---hfkNKNIIVFFFTLATIGLLTLYWthvi--- 306 Lactobacillus p...
O31600       231 SVWSSAILLaftaavlheTEVWWGMFNASYFIGAIVGSVIAIRfssf-fernMGYAIMFSSLVMSALTLLFSFspvp--- 306 Bacillus subtil...
O34440       232 MIWIGSVSLafvnevlhkGESWWGFINGAYYLGSMIGGFIIYKlser-fqnkLINFMLIGAVSYGSLTLIYGFisns--- 307 Bacillus subtil...
NP_359574    226 TIWVSSIILvfvtellnkTESYWGYSNTAYSIGIIISGLIAFRlsekflaakWESILFPLVAMAIVTLTILYFpnaq--- 302 Streptococcus p...
YP_036219    235 TIWIGAITMayvttvlhkGEEWWGYINTSYYVGTLIGGLLAWKmsty-iqnnLIRSMAIGSLMFSILTFLYGMtssg--- 310 Bacillus thurin...
Feature 1                      ##   #   #               #  ##  ##  #                             
P95827       310 -ffifvVCCAIMGLSVPFYSGVQTALFQEKIKpeylGRVFSLTGSIMSLAMPIGLILSAlfa---driGVNHWFLLSGTL 385 Streptococcus
O31561       310 gitlfiFAFFIMGAAFGLVHIPFQILVQTTVPvdysGRVFGAIQSATTLASILGMAGGGvla---ewiGVSLAFLVCGCL 386 Bacillus subtilis
P64784       312 --pvimVLCAVVGLVYGPIQPIYNYVIQTRAAqhlrGRVVGVMTSLAYAAGPLGLLLAGplt---daaGLHATFLALALP 386 Mycobacterium b...
O32859       312 --plilVLCAIVGFVYGPIAPIYNYVMQTTAPqhlrGRVVGVMGSLAYAAGPLGLILAGpladaaglhATFLALSLPMLL 389 Mycobacterium f...
YP_500904    298 ---imfICITLIGLFSQWARTTNRVYFQNNVKdyerGKVLSIIMMDRGMIPLGSLLMSIcad----vfGIVRTFSIMGIS 370 Staphylococcus
YP_004888503 307 --pltyVCTFSLGLSNSALRVVINTVLMHRVDkkfmGRATSIWNGTAQLIEVFASTLMGvan---dkfGANIGFLWMAVI 381 Lactobacillus p...
O31600       307 --flcaLACAAMGPFYQVRDICQETMLQEVIPeqkrIGIMAAKNAILTPWSGVTYSIMGlva---daaGAKIAFIAAAAL 381 Bacillus subtil...
O34440       308 --ylalILVLFMGPAYILRDLTQETLIQNITTeqtrINIMSARSSLVQFIFMFSILAIGais---dflGVRLVYVSAGIL 382 Bacillus subtil...
NP_359574    303 ---mflLFSALVGMLLQLKEVPESVFLQETVEenhlVNVYSVLEVISTLAFSVFVLLMSyit---esfGISISFWLSAIC 376 Streptococcus p...
YP_036219    311 --fialFLCVLMGPCYQVRDISQTTVLQSSVEptllSKMYTAHGALLSTASGLSMLSVGiit---difGVRTIYIIASLL 385 Bacillus thurin...
Feature 1                   
P95827       386 IICIAIVCPMI 396 Streptococcus
O31561       387 LIMIGLITLIG 397 Bacillus subtilis
P64784       387 IVCTGLVAIRL 397 Mycobacterium bovis AF2122/97
O32859       390 LGVVAVFLPRL 400 Mycobacterium fortuitum
YP_500904    371 TICITMVFYFI 381 Staphylococcus
YP_004888503 382 MLIGAVWSFIM 392 Lactobacillus plantarum
O31600       382 YIMTFLIALAQ 392 Bacillus subtilis subsp. subtilis str. 168
O34440       383 LLVSAIYGFSQ 393 Bacillus subtilis subsp. subtilis str. 168
NP_359574    377 LMIEAILIYIR 387 Streptococcus pneumoniae
YP_036219    386 ILCSACLSFSL 396 Bacillus thuringiensis

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