1UL5


Conserved Protein Domain Family
SBP

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pfam03110: SBP 
SBP domain
SBP domains (for SQUAMOSA-pROMOTER BINDING PROTEIN) are found in plant proteins. It is a sequence specific DNA-binding domain. Members of family probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands.
Statistics
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PSSM-Id: 460809
Aligned: 76 rows
Threshold Bit Score: 89.1973
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1UL5_A              6 CQVPDCEADISEl-kGYHKRHRVCLRCATASFVV-LDGE----NKRYCQQCGKFHLLPDFDE------GKRSCRRKLERH 73  
XP_005845837      294 CRVPGCSRELKVg---FLQRCRCCEFHSREPQLE-LHGV----TSRFCQQCGFFHALEEFDA------QRRSCRRSLERH 359 
XP_003063374      173 CLVDNCENPRKQm-lQRARMYLTCAEHARAKMVM-FKDE----ECRECQACRTFHPLSEFDG------LNKTCETRLSRK 240 
jgi:MICPUN_61429  600 CLVDDCFTPRKQpseQNSRMPLTCKEHSGALVVL-YGGV----ASRECQACRTFHPITAFDR------DNKTCETRLLRK 668 
XP_002500625      126 CQVDDCLNPRKQp-tANSRMPLTCAEHNGMLSLT-YGGE----ASRECQACRAFHPVSAFDR------DNKTCETRLLRK 193 
XP_002952986       92 CQADGCMADLSGl-rRYFRRYHVCETHIRSQVVH-IGGR----EVRFCDQCSTFHPLAFFDG------VRRTCRDKLEQN 159 
XP_003059595      129 CTADGCDKACDTa---YTRRYRTCREHIDSLDVL-RDGL----HQRFCQRCSSFHALAAFDG------SRHTCRQALDAY 194 
XP_002504061      174 CTVDNCGEPCVSv---YCRRYHTCREHIGALHVV-RNGA----DVRFCQRCSSFQPISDFDG------DRHTCRDALRAY 239 
EFN56984          190 faVHGCEVVLNNl-rSFFLRQRICEEHARSEAVPdGRGG----LARFCQQCTKLEPVAAFDG------RRRSCRTSLAKR 258 
XP_002507948       78 CQVVGCDIEYSS---THECRARACQTHCSALSVR-LEGQdpeqQFRFCYQCHKFHELDAFRNpdgtlrPRHNCYQSQALR 153 
1UL5_A             74 NNRRKRK 80  
XP_005845837      360 RVCRRLR 366 
XP_003063374      241 KVRYRAR 247 
jgi:MICPUN_61429  669 KLRYRAK 675 
XP_002500625      194 KLRYRAK 200 
XP_002952986      160 RMKRRAR 166 
XP_003059595      195 NESRRKI 201 
XP_002504061      240 NSARREA 246 
EFN56984          259 HKRLNRA 265 
XP_002507948      154 LDRRKKk 160 
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