3KVN,3QQ2


Conserved Protein Domain Family
Autotransporter

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pfam03797: Autotransporter 
Autotransporter beta-domain
Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C terminus of the proteins it occurs in. The N terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.
Statistics
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PSSM-Id: 461054
Aligned: 542 rows
Threshold Bit Score: 50.8451
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3KVN_A        359 GFVGGGGQRLD--FDSQDSAASGD--GNGYNLTLGGSYRId-EAWRAGVAAGFYRQKLEa-----------GAKDSDYRM 422  Pseudomonas a...
Q9F287        487 VFITPYAGEYR----RDPVTSGYS--GQRYGVLLGQNQHF--GDFQLGWHGGYESASTDfn---------gTSVGRKEEI 549  Yersinia pestis
Q6AKC6        488 AFAMPYYSNVS----NNASPMGYD--ADIYGATAGYNHWId-SDLILGFHAGYGSGDINyt--------gkGYEQKKENL 552  Desulfotalea ...
WP_039104297  539 VWINLTHQYED--NDSKRGIAGYK--YSANGFLLGYDKSIq-DDWLIGAAFGYSDGNYKd----------kSAVSNDSNI 603  Frischella pe...
Q9CM43        825 IFVKYLNGKQKygSNLSFIDYGYDfnASYSGVMLGGKVWQs-ERGNHALYTALNKTSYKvt---------pKAVDGETKA 894  Pasteurella m...
WP_014392694 1374 IWAKPFYTDAH--QGKKGSLAGYK--AKTTGVVIGLDTLAn-DNLMIGAAIGITKTDIKhq---------dYKKGDKTDV 1439 Rickettsia am...
Q9ZD91       2065 IWGMSFYGKIK--QNSKNSASGYQ--SNTGGGIIGFDYNId-NSIVIGAAYTMADSKVKhk---------nDKNGDRTKA 2130 Rickettsia pr...
KJV99915       52 LWSSGTLGSSQ--QKSKADSNGYS--SRMAGGSIGADTHFe-NDLLLGASFSKIRSSIKeqsggdlsdlqnQDQNTKTKY 126 
Q9ZE66         71 IWISGLYGVNK--QGVWKNIPKYQ--GRTTGLTIGADAEFinNHDVIGIAYSNLESKIKy-----------NKKLGKTAV 135  Rickettsia pr...
WP_011944685  378 IQGNIFTSKSS--QEENEELKKYD--AGINGVFITVNKYVn-ENTIVGATGLYSNLNIQyde-------niKHIFNKTDC 445  Orientia tsut...
3KVN_A        423 NSYMASAFVQYQ---ENRWWADAALTGGYLDYdDLKRKFALGGge----rsEKGDTNGHLWAFSARLGYDIAQqa-dSPW 494  Pseudomonas a...
Q9F287        550 NTLMLGVQGGMKl--SESLFIAATSTWFSSDTdYSDSNTYYGVg------sQSGSYDSSGLYTDVSVGNSWQLn---RNY 618  Yersinia pestis
Q6AKC6        553 KAGSLGVQSLYRf--ADDWLLQSIASFYYSSNdYSDNNP-Ln--------rEQGDYHGYGVNANLDLDYVFSF----TNN 617  Desulfotalea ...
WP_039104297  604 KNYQVQLYSRYKl--SNDIFTTAYFGYTYGDIeLKQHDGay---------lAKEDFLSHTWNVGGNLGYSWHAl---PSL 669  Frischella pe...
Q9CM43        895 KYHSWGGSINWHsnlPHNLIVDLSAGYQKHKGdi----------------eHAGHVKGYTFNIGADLGYRYQWm---KNA 955  Pasteurella m...
WP_014392694 1440 NGFSFSLYGAQQl--VENFFAQGSAIFNLNQVkNKSQRYFFDAngnmskqiAAGNYNNMTFGGNLTVGYDYNAm---QGV 1514 Rickettsia am...
Q9ZD91       2131 KSNIYSIYGLYNw-lTNNFFVEAIGVYGRNKIkNYEKRITTITdq-----iAIGKFINTFYSYELLGGYNYLIs---HRT 2201 Rickettsia pr...
KJV99915      127 DTYILSLYGLSQv--GGNMSISVIGSAGLSKGkKAGSDTrd--------veSGNKPRSKLFSLELHLNYKIALl---KEV 193 
Q9ZE66        136 HGHLLSVYGLKEl--VKGFSLQSITSYGHNYI-KNKSKNLNKI---------IGKYQNNNFQTLLNYKYRTK-----YNL 198  Rickettsia pr...
WP_011944685  446 KTFSLSLNGRYYp--QDNVFTQGIIGFITYDG-KTEYIAn----------kPSSEISGKGYYVDFMLGGDLNSiaynPKL 512  Orientia tsut...
3KVN_A        495 HLSPFVSADYARVEVDGYSEKGa----SATALDYDDQKRSSKRLGAGLQGK-YAFGs---------DTQLF-AEYAHERE 559  Pseudomonas a...
Q9F287        619 AMTPMVGLTHIWQQRDGYTVSSnnknyDLIDTRYSSYSDHAVALHAGVRLD-GRYPltn-----etLLKPF-FNVGFQQM 691  Yersinia pestis
Q6AKC6        618 RLVPSVGLRYLWQHVDSYTAYNl----DNADVNYGDMDENQLYANLGLDWY-GDYRtes-----nwQIVPS-LGLGVEQA 686  Desulfotalea ...
WP_039104297  670 TLTPSVGLTYVYTENSAHNVKYn----QAKLIKYGTASNSALFIPMDVTAD-YSVLqh-------aDIDLS-VKAKVGYA 736  Frischella pe...
Q9CM43        956 FITPMVGLHYLYASLSDVNDQA-----NKALL--KYNNFNALKTNLGVDVN-YRIGkf--------eVKGLlSYDMYQQK 1019 Pasteurella m...
WP_014392694 1515 LITPMAGLSYLKSSDENYKETGt----TVANKQVNSKFSDRTDLIVGAKVAgGTMNit------dlAVYPE-AHAFVVHK 1583 Rickettsia am...
Q9ZD91       2202 TITPMFGMRYATFKNNGYKENNt----TFQNLSIKKNYYDKFETILGLNSV-THYLsq------diIIKPE-LHWFINYQ 2269 Rickettsia pr...
KJV99915      194 NLIPHIGLKYEYENANRHKEKIt----NDCAIERPKKSYQALNTEIGNRVI-FAPIkltgstasimSITPT-AHFSVERR 267 
Q9ZE66        199 HFIPSIGFKYDYSRASNYKEYNv----DIENLMIQKKSNQSFESSIGAKIV-SKPIisk----nniILTLS-AHGNIERH 268  Rickettsia pr...
WP_011944685  513 TVSPIVGIRYNKFNNSSYKLFN--------DVNVSDAEHHILEARAGGTVK-YVIDnk------niSIIPE-VYAFIHSN 576  Orientia tsut...
3KVN_A        560 -YEDDTQDLTMSLNSLPGNRFtl-eGY---TPQDHLNRVSLGFSQKLA-PELSLRGGYN 612  Pseudomonas aeruginosa
Q9F287        692 lYGDEITIDQSI------PNSp--vVGvstKDKTTQGTFDLGMALVSD-NGVSASLQLS 741  Yersinia pestis
Q6AKC6        687 -LTDNEFGNSMG------VGSi--iIPvtnSMDKTSVSARASIEFVK--DSYALSAGYA 734  Desulfotalea psychrophila
WP_039104297  737 -FNLTDDEFDNDITINGINGLn---KMsarTSGRSKNQFNMGTGIALKfNQFDFDIDYH 791  Frischella perrara
Q9CM43       1020 tRQLYVDDVAYKQGKLADTLHln-tQFvahLTPRFAFSTEVGFQHARNkGQSSFAVGAH 1077 Pasteurella multocida
WP_014392694 1584 -VNGRLSKTQSVLDGQVTPCIs---QPd--RTAKTSYNLGLSASIRPD-AKMEYGIGYN 1635 Rickettsia amblyommatis
Q9ZD91       2270 -CKNKLPNIDARLDGIDEPLTt---IRf--KPAKITYNLGGGISTKN--NMIEFGIRYN 2320 Rickettsia prowazekii
KJV99915      268 -IGSRGKSHPCTLTY-SELGQtigaGSisaNTQNDRTSLNTGIGLIASrKNIKLELLLN 324 
Q9ZE66        269 -FNNKNTKVNAKATFKKQTLQe--tIIi---PKQPKLGYNIGNNILMSiKNINVLLEYN 321  Rickettsia prowazekii
WP_011944685  577 lPTNSSNIKLEY--VASSNSSt---VDik-pAKMHTLFGQLGGTVTIYrGPIRFGASYS 629  Orientia tsutsugamushi
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