Conserved Protein Domain Family
TCP1_delta

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cd03338: TCP1_delta 
TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Statistics
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PSSM-Id: 239454
Aligned: 23 rows
Threshold Bit Score: 650.504
Created: 6-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:stacking interactions
Evidence:
  • Comment:interactions of one subunit to subunits of the second ring
  • Comment:annotation based on structure of bacterial homolog GroEL

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
CAA98716   12 KNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTsrGEIIISNDGHTILKQMAilHPVARMLVEVSAAQDSEAGD 91  baker's yeast
AAP88262   21 NRSEKTNDIRTTNIQAAKAVADVIRTSLGPRGMDKMIQDakGQVLITNDGATILKQMDviHPTAKMLVEISKAQDIEAGD 100 Tetrahymena pyrifo...
CAA88861   24 KDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSgnGDVTITNDGATILNQMSviHPTAKMLVELSKAQDIEAGD 103 nematode
NP_705461  13 IINEKQNDVRLTNILAAKAVADVTRTSLGPKGMDKMIEDgkGGVIITNDGATILKEMAvaHPTAKMIVELSKAQDVEAGD 92  Plasmodium falcipa...
EAL46389   17 EGKEGEKNIRQTNIIAAKSVADAVRTSLGPRGMDKMIISpnGETIITNDGATIIQQLKlqHPCALMMSELSKSQDIEAGD 96  Entamoeba histolyt...
AAG18497   18 QGQDRPTDVRMSCILAAKSVADAVRSSLGPRGMDKLIQEknGEVIITNDGATILKHMGaaHPAAKLMVSMSQAQDVAAGD 97  Trichomonas vaginalis
XP_778702   8 EGNEKQADVRVSNIQAAKGIFDLIRTSLGPRGLDKMVTTpkGDVLITNDGATIMKQLEarHPAARMLIELSQSQDIEAGD 87  Giardia lamblia AT...
EAN77536   11 KDTNTQTDVRLSNITSAKAVADCIRTSLGPRGMDKMIIEprGEVIISNDGATILSKLQvtHPCAKMLVELSKAQDVEAGD 90  Trypanosoma brucei
XP_626131  21 SRNERSRTTRHENIVAAKVISEIIRTSLGPKGMDKMIEK--GEVIITNDGATILKEMAvvHPCAKMLVELSKAQDVEVGD 98  Cryptosporidium pa...
CAI73807   16 NRNEKTADVRKKNILAAKAVADLVRTSLGPKGMDKMIQDgkGGVIITNDGATILKELSlvHPTAKMMVELSKSQDIEAGD 95  Theileria annulata
Feature 1                                                                                     
CAA98716   92 GTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVsl------sdREQLVRAASTSLSSKIvsq 165 baker's yeast
AAP88262  101 GTTSVVVIAGALLHACEALLARGIHPTTISEGFQIALDEALKVLKSISTTVdl------kdRDALITCVNTALSSKVist 174 Tetrahymena pyrifo...
CAA88861  104 GTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVdl------snDALLNKMATTSLNSKVvsq 177 nematode
NP_705461  93 GTTSVVVMCGSFLNVCKSLLDKNIHCQKISESFFEASLKSEEILREMSIPIdl------ndKNMLIQNAITSLNSKVvsy 166 Plasmodium falcipa...
EAL46389   97 GTTTVTILAGAMLSAANILLNKGVNPSVIARAFHLSSAKSAEILKEASIPIel------tdRESLLKAANTSLNSKVvnq 170 Entamoeba histolyt...
AAG18497   98 GTTSVVIFAGAFLSACKTLLERKLHPSLVSDALRIATDEAIKILDQMRIPFgqgetfteqeREILIDSARTSLSSKLasq 177 Trichomonas vaginalis
XP_778702  88 GTTTVVVLAGRLLANCLDLFKLGIHPTAISEAYQVACDEAVKVVMSIARPVdl------knREELINICKTTLSSKIish 161 Giardia lamblia AT...
EAN77536   91 GTTSVVVLCGALLRAVEELLLKGIHPTQISECFNECAKLAEQVLEGMSVKIdi------ndRETLIRAAITSLNSKIisq 164 Trypanosoma brucei
XP_626131  99 GTSSVVVLAGSLLGAAETLLDKGIHPQLISQYFMEGCSMIEKILRGMSIKVdl------tdKNTLIKSACTSLSSKVvsh 172 Cryptosporidium pa...
CAI73807   96 GTTSVVVICKALLEMVENLLNQGIHPQTIADSMMLAVNKTEEILESISKPIsl------edRSLLMDIAGISLQSKVvsq 169 Theileria annulata
Feature 1                                                                                     
CAA98716  166 YSSFLAPLAVDSVLKIsdens----------------knvdlNDIRLVKKVGgtidDTEMId--gVVLTQTAIKSagg-p 226 baker's yeast
AAP88262  175 NSQQLSPIAVDAVLKIidtakd---------------tnadlRDIKVVKKLGgtieDTELIe--gLVFTNQKPSQsaggp 237 Tetrahymena pyrifo...
CAA88861  178 HSWLLAPMAVNAVKKIinsend---------------snvnlKMIKIIKKMGdtveESELIeg-aLIDQKTMGRGap--- 238 nematode
NP_705461 167 NSSLLAPIAVDVILKItdinkd---------------tnvdlNNVRIVKKLGgtieDTEIVd--gLIFTGNKISKkaqgl 229 Plasmodium falcipa...
EAL46389  171 SSQTFAPIAVDSVMKVidinta---------------tnvdlRNIRITKKIGgtidDTELId--gLVFLQKASHVsgg-p 232 Entamoeba histolyt...
AAG18497  178 WSDILAPLAVDAVLRVhdgk------------------hvdlNDIRVVQRVGgvidDSELVd--gVVFPHHFQRQsgd-a 236 Trichomonas vaginalis
XP_778702 162 HSDHLAPLILDSVLRVsdsd------------------nvdlSRIHVIKRLGgt-vDESRLtt-gLAFARRPTEGp---- 217 Giardia lamblia AT...
EAN77536  165 NSDLIAPMAVDAVRQImrdng-----------------dvdlRDVRIVTALGgt-iDESVMlsngMVFKQKASHVagg-p 225 Trypanosoma brucei
XP_626131 173 SAQHLASIAVDAVLGIsrtyqknsivsdyehevqdmrktvdlKNIRIVKKLGgtveDTELVd--gLILHQQKVSRtaggp 250 Cryptosporidium pa...
CAI73807  170 NASLLAPMAVDCVLAVmdspes---------------rnvdlRSVRIVKSIGgtieDSEMVdg-lVFSDQKAVRTasg-p 232 Theileria annulata
Feature 1                                                                                     
CAA98716  227 tRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDaVNDLALHFLS 306 baker's yeast
AAP88262  238 sRIKDAKIALIQFCLSSPKTEVENSVVVKDYTAMDRILKEERKYIANLVSKIVKSGANVVLIQKSILRDaTNELSLHFLA 317 Tetrahymena pyrifo...
CAA88861  239 tRIEKAKIGLIQFQISPPKTDMENQVIITDYAQMDRALKEERQYLLEICKQIKAAGCNVLLIQKSILRDaVNELALHFLA 318 nematode
NP_705461 230 kNLTQAKIGLIQFCLSLPKTDMDNTVVVKDYNSMDRLLREERLIIGKMIKKIASTGCNLLIIQKSILRDaVNDLALDFLA 309 Plasmodium falcipa...
EAL46389  233 tHIENAKIGVCQFCISPPKTNMDGNVVITDYAQMDKVLKEERAYTLKLCRAIQKSGCNVLLIQKSILREgVSDLALHFLA 312 Entamoeba histolyt...
AAG18497  237 rKINNAKIALIQFQISPPKTDMESQVILNDYAQMDRVQREQRKYILNIVNAIAKTGANVILLQKSVLRDaISDTALHFLN 316 Trichomonas vaginalis
XP_778702 218 gFCEKVKIGIARFCLSPPKTDMEANLIVHDSDAIDRLLEQERKLTAKMCKKIASSGCNVLLLQKSIMREaVSDMALHFLK 297 Giardia lamblia AT...
EAN77536  226 vRIANATIALIQFQLSPPKTDMESTVTISDYNQMDRALKEERKYLLNLCKQIKDAGVNVLLVQKSVLRDaVTVQSLDFLA 305 Trypanosoma brucei
XP_626131 251 tRIQNARIGLIQFCLSAPKTDIENNIVVKDYTAMDRLLREERLLIAKMIKQIAATGCNVLLIQKSILREaISTLALDYCA 330 Cryptosporidium pa...
CAI73807  233 tRIVDAKIGLIQFCLSTPKTDMDNNIVVKDYQSIDRIMREERLITAKMVKKIAQTGCNVLLIQKSILRDaVTDLSLDYLA 312 Theileria annulata
Feature 1                                                                                     
CAA98716  307 klNIMVVKdiEREEIEFLSKGLGCKPIadiELFTEDRLGSADLVEEIDsd-gsKIVRVTGIRnnn-------arPTVSVV 378 baker's yeast
AAP88262  318 kkGIMVVKdiEREDVEFITKTIGAIPVahiDHLTPEKLGKAELCEDVKlsddsRILKITGVQsk---------aKTVTIL 388 Tetrahymena pyrifo...
CAA88861  319 kmKIMCIKdiEREDIEFYSRILGCRPVasvDHFNADALGYADLVEEIPtggdgKVIKVTGVQnp---------gHAVSIL 389 nematode
NP_705461 310 kaKIMVIKdiDREDIEFISKTCNCIPVaslDYFTSDKLGYAENVTTESvg-ygEIVKITGVEs----------kNTISVL 378 Plasmodium falcipa...
EAL46389  313 klKIMVVKdiERDDIEFICKTIEAVPIasiDGFTEDKLGHAENVEEVSiededKIVKITGVKgt---------aPCVSVL 383 Entamoeba histolyt...
AAG18497  317 kkGIIVVKdiDREEVDFVCRTIGCQPIasvEGLSADKLGFAETVEEVTta-ggAIIKIMGLKkv---------sKTVTVL 386 Trichomonas vaginalis
XP_778702 298 klKITVIDdiEREEIDFIATTTGATPVatiDEFTSDKLGSMGELTVVD-----GVTYISRNQdee------ksvKTCTII 366 Giardia lamblia AT...
EAN77536  306 kmKIMVVKdvERSDIDFITKTIGCLPVaniENLKPEKFGHADLVVEENtp-sgKIIRITGVQppsekinlqlfgKTVTFF 384 Trypanosoma brucei
XP_626131 331 kaKILVVKdiERDEIEFLSKALNCSPIaslDHFTSDKLGAANRVSDEDldgngRICRITGIPg----------kDMMTIF 400 Cryptosporidium pa...
CAI73807  313 kaKIMVIKdiEREDIEFITKSIGCEEVasiDHFTPEKLGTAKLVESKVeg-asRIVKITGVNm----------kKTASVL 381 Theileria annulata
Feature 1                                                             #                 #     
CAA98716  379 IRGANNMIIDETERSLHDALCVIRCLVKErGLIAGGGAPEIEISRRLSKEars-meGVQAFIWQEFASALEVIPTTLAEN 457 baker's yeast
AAP88262  389 CRGSNSLVIDEAERSLHDALCVVRSLVKNrGLVPGGGVPEVEISQQLSKLsre-mkGVNSLIVRAFADALEVIPYTLAEN 467 Tetrahymena pyrifo...
CAA88861  390 LRGSNKLVLEEADRSIHDALCVIRCLVKKkALLPGGGAPEMEIAVKLRNLaqt-qhGATQYCWRAFADALELIPYTLAEN 468 nematode
NP_705461 379 LRASNNLMLDEAERSLHDALCVVRSLIKEkAVLPGGAAPEMELSQKLYQWant-lkGSKQICVKAFSDALELIPYTLAEN 457 Plasmodium falcipa...
EAL46389  384 VRGANRLVLDEAERSLHDALCVVRSLVKCkYLCPGGGAMEMELCCKLKQWaet-lkGEYGLCVKEYAEAFEIIPYTLAEN 462 Entamoeba histolyt...
AAG18497  387 LRGSNELIIGEAERSLHDALCVIRSLVYErYLLPGGGAPEVELAIKLAKKade-igGEIGHCIRAFADSLDIVPYTLAEN 465 Trichomonas vaginalis
XP_778702 367 VRGANKLILDEAVRSVHDGLCAIRCLIKKgFIIPGGAAVETEIARCLYERshs-qtGVGQYCMRAFADAFEIIPLTLAEN 445 Giardia lamblia AT...
EAN77536  385 LRGSNNLMLEEAERALHDSLCVIRSIVKKrAIVAGGAAGETEVCLQLSKYareraqGMQTFCMRAFADAFEVVPYTLAEN 464 Trypanosoma brucei
XP_626131 401 VRASNMLMLDETERCIHDALCVVRSIIKEqALVPGGGACESQIYTELSNWaks-lsGVKQMCIRAYAQAFEIIPYTLAEN 479 Cryptosporidium pa...
CAI73807  382 IRASNTLVLDEAERSLHDALCVVRCLVKRrSILPGGGAPEMEVSHKLSQWamt-leGVSQVCVKAFAEALEIIPYTLAEN 460 Theileria annulata
Feature 1        # ##  #                                                                 
CAA98716  458 AGLNSIKVVTELRSKhengelnDGISVrrs-----gtTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFS 527 baker's yeast
AAP88262  468 AGLNPINIVTDLRNRhalghkyAGISIrkg----tinDDITTESVLQPALVTQSALTLATECVRMILKIDDLVFS 538 Tetrahymena pyriformis
CAA88861  469 AGLSPIHTVTELRNNhangnssYGVNVrkg-----yvTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIVMA 538 nematode
NP_705461 458 AGLSPLHIVTELRNKhaeghkyHGINIrtg-----tiSNMIDENVIQPLLVTSTAIKLATETVMMILKIDDTVIC 527 Plasmodium falciparum 3D7
EAL46389  463 AGLNPMELVTQLKLAhlngeknAGISMrkdnkvqgsvDDMTSLNVVNPLLVFLSAVKLATDTVALILKIDNIVVA 537 Entamoeba histolytica H...
AAG18497  466 AGLAPLDVVTQLREAhssgkmyYGVSVvac-----gpADMKEEEVLQPYLVTKSAVTFASETVRMILKVDDILAT 535 Trichomonas vaginalis
XP_778702 446 AGLSPITTLTELRRVhkkggttYGLDInrg----geiSEMFALNVIQPALVTISAITLATETTRMLLKIDDIVLG 516 Giardia lamblia ATCC 50803
EAN77536  465 AGLQPISIVTELRNAhasgnknAGVNVrkg-----cvTDMVEENVVQPLLVSTSAVRLAAECVMMILKIDDIIMT 534 Trypanosoma brucei
XP_626131 480 AGLNPIEIVTQLRKKhfdgeiyAGINVrka-----avTDILKENVLQPLLVNLSSVKLATETVMMILKIDDIIPC 549 Cryptosporidium parvum
CAI73807  461 AGMYPLSVITELKAKhvqggtnFGINIkkn-----siSDMFEDNIIQPLLVTLSAIKLATESVLMILKIDDIVLC 530 Theileria annulata

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