Conserved Protein Domain Family
RarA

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COG2256: RarA 
Replication-associated recombination protein RarA (DNA-dependent ATPase) [Replication, recombination and repair]
Statistics
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PSSM-Id: 441857
Aligned: 706 rows
Threshold Bit Score: 462.989
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_067876044   1 MvntaqglrsGATPLAVRMRPTSLDEVAGQRHLLSPGSPLVALAGDRtgesGSVSVILWGPPGTGKTTLAQAIARSSGRK 80 
WP_013484414   1 -----------MPPLADRLRPKTLDEVVGQRHLLAPDMLLRRVVETG----QIPNLIFYGPSGVGKTTVASILAKQAGKT 65 
WP_037304774   1 ------------MPLAERIRPKTLDEIVGQPHLMGVGKPLRRIIESG----TIPNLIFYGPSGVGKTTIARFIAENANMT 64 
WP_014118500   1 M---------QQRPLADEIRPRTLDEVVGQKHLLAPGAVLRRLIESG----TSANMVFYGPSGTGKTTVANIVAERTQKT 67 
WP_033117170   1 M---------AYRPLADEIRPASLDDVVGQKHILGADGLLRRIIESG----SIPNLVFYGPSGTGKTTVANIIAARTNRT 67 
WP_065534813   1 M---------SYRPLADEIRPQSLDEVVGQRHILGENGLLRRIIESG----HIPNLVFYGPSGTGKTTVANIIARRTNRP 67 
WP_083273893   1 M-----------EPLSVRMRPNTLDDFIGQAHILHKKSLLYQSIKNQ----TFDSAIFFGPPGTGKTTLARIIVGELDAN 65 
WP_005934388   1 ----------MNEPLAQRMRPKTLAEVCGQQHLLAPGRVFRRTIESG----RIPNMIFYGPSGTGKTTVARIIAENSGMT 66 
WP_128745378   1 M-----------IPLSTRMRPDSIDHFIGQNHFMYKGSLFYNSIKNK----TFDSAIFFGPSGTGKTTLARIIAREMDGE 65 
WP_128742129   1 ----------MSAPLADRIRPRELSEIVGQHHLLDPGRPLRRIIESG----EIPNMVFYGPSGIGKTTLASIIAARTSRK 66 
WP_067876044  81 FVELSAVSAGVRDVRQVMEEARSSR-DlYG-VSTVLFLDEIHRFTKAQQDALLPGVENGWVILVAATTENPSFSVISPLL 158
WP_013484414  66 LHRLNGTNMSTADIKAIVGELDTFA-G--M-GGVLLYLDEIQYLNKKQQQSLLEFIEDGRITLIASTTENPYFYIYNAIL 141
WP_037304774  65 MFKLNGTSASVADIKQIIAETEMIG-G--M-NGILLYLDEIQYLNKKQQQSLLEYIENGKITLISSTTENPYFYVYNAII 140
WP_014118500  68 LYRLNATSATLQDVKDIIANVGTLL-A--P-GGILLYLDEIQYFNKKQQQSLLEFMENGQITLIASTTENPYFYVYGALL 143
WP_033117170  68 LRRINATTGSLSDVKDVIGEVGTMM-A--P-NGILLYLDEIQYFNKKQQQSLLEVIERGDVTLIASTTENPYFYVYNAVL 143
WP_065534813  68 LHRLNATTASISDIKDIIKDIGTML-A--P-DGVLLYLDEIQYFNKKQQQSLLEFMENGKITLIASTTENPYFYVYNAVL 143
WP_083273893  66 FHELNATTTGTKELKEIIDYAKKTKyTl-GyKPTYVYVDECHRWNKSQQDALLKALEEGTIKFIGSTTENPYFAMNPAVL 144
WP_005934388  67 LHKLNGTSCGTGDIKAVLKDIGTLA-G--A-GGILLYLDEIQYLNKKQQQSLLECIEDGTVTLIASTTENPYFYIYNALL 142
WP_128745378  66 FYELNAASTGIKELKEIIEKAQLKFfGiQK-QSTYVYVDEVHRWNKLQQDTLLKAIEEGVIHFIGSTTENPYFSINNAII 144
WP_128742129  67 LVRMNGTTATTADIRDVVNQLDTLE-A--P-NGILLYLDEIQYFNKKQQQTLLEFIENGSITLIASTTENPYFYVYGAIL 142
WP_067876044 159 SRS-LLLTLELLSDDDLGLLVDRAVAD-ARGLAG-SVDLEPEARAAIVRLASGDARRALTALEAASVAAAGvladelrEa 235
WP_013484414 142 SRC-TVFEFKSVPSAEIAKAVRRAFAVmEQD-KGrTIRVPDEVVAQISTGCGGDVRKAINAVELLALAAREa-------- 211
WP_037304774 141 SRS-TVFEFKPVTPEQISPAIKRAFDLmAQD-IGtEVILEEGVIEHIARGCGGDVRKSVNTVELCVLSAEN-------Gs 211
WP_014118500 144 SRS-TVFEFKSVPPKEILPAVERALEIeKKR-QElPLSWEKDVPLDIATACGGDVRKAINAVELLCQAARP-------Nk 214
WP_033117170 144 SRS-TVFEFKPVEAGEVLPAIDRGVSImAKR-LGgVAEFEDGVREAIASSCGGDVRKAMNAVELLMNAAARq-------- 213
WP_065534813 144 SRS-TVFEFKPIEAADVLPAIDRGIRLmGER-LGaEVDCEDGVREHIATACGGDVRKSMNAVELLLSSARRe-------- 213
WP_083273893 145 SRVrAIYELKRLSIEELSKVLIRAIND-PHGLGNyHISMSQENINLIANLCNGDGRIALNTLEFIVKSLGK-------D- 215
WP_005934388 143 SRC-TVFEFKSLTAADVEQGLRNALKKlSES-EGtPIRMEDDACAYLAESAGGDLRKALGCLDFAVTAAAP-------Ep 213
WP_128745378 145 SRVrNIYEFKAHTVQDLMNILKYTLQDtERGLGNlSIGYDEEALRVLAELSSGDARVALDTLGFIADNLNQ-------D- 216
WP_128742129 143 SRS-TVFEFKPVEKEDVREAAKRAFGIlEEE-QHrGIRVEPGALDVIASACGGDVRKAMNAVELCVVSGEEk-------- 212
WP_067876044 236 egdaeaeadgderdegddsadrdasgdgdarqgddqtdddgadaaapSRAVITAELVARAVDRALLRYDRNgDEHYDVIS 315
WP_013484414 212 ----------------------------------------------dGELTVTAEDAAAAAQKSAMKYDREgDEHYDLLS 245
WP_037304774 212 ----------------------------------------------kGELHVKMDTVRELTQRSNMRYDREgDEHYDILS 245
WP_014118500 215 ----------------------------------------------sGKLKLTREDASQVSQRSAMRYDREgDAHYDILS 248
WP_033117170 214 ----------------------------------------------rGKLVVSLEDARLVAQRSAMRYDRAgDDHYDILS 247
WP_065534813 214 ----------------------------------------------gERLVVTLADAQTVAQRSAMRYDREgDDHYDIAS 247
WP_083273893 216 -------------------------------------------------AKIEKDTIIEAMQQRVNYYDRE-EDKYNYLS 245
WP_005934388 214 ----------------------------------------------eG-KHITLDMIQQVTRRTAMRYDRDgDDHYDIVS 246
WP_128745378 217 -------------------------------------------------MQITTKLVGEAMQRKTSFYDRg-EDRYNLLS 246
WP_128742129 213 ----------------------------------------------dGACLVTEQLARDLTQRSAMKYDRAgDEHYDILS 246
WP_067876044 316 AFIKSVRGSDVDAALHYLARMIEAGEDARFIARRIIVLASEDIGLADPSALGVAVAAADAVQFIGMPEGRIPLAQAVVHL 395
WP_013484414 246 ALQKSMRGSDPDAAVHYLARLLEAG-DLPSVCRRLMVCACEDVGLAYPQIIPIVKASVDAALQVGLPEARIPLADAVVLV 324
WP_037304774 246 ALQKSIRGSDENAAIHYAARLIEAG-DIISLCRRLLVIASEDVGLAYPMAAVITKSCVDSALQLGLPEARIPLAEAVIML 324
WP_014118500 249 ALQKSIRGSDPDAAVHYLGRLLEAG-DLLSPCRRLLVIAAEDIGLAYPMAMVVTKACVDAAVQLGLPEAQLPLAEAAILL 327
WP_033117170 248 ALQKSIRGSDPDAACHYLARLLEAG-DLISACRRLMVIACEDVGLAYPQVIPIVKACVDAANMLGLPEARIPLGDAAVLM 326
WP_065534813 248 ALMKSMRGSDPDAALHYLARLLEAG-DMTTAIRRILCSASEDVGMAYPQAALIVKACVDNALQLGLPEARLPLAQAVVLL 326
WP_083273893 246 ALQKSIRGSDPDASILYLAYLIEGGADIQTIGRRLLVIASEDIGLASPNAISIVLSCIQAAQMVGFPEARIILAEAVLLL 325
WP_005934388 247 AYQKSMRGSDPDAALHYLARLLEAG-DLPSACRRLMVCACEDVGLAYPQIIPIVKAAVDIANAVGLPEARLALADAVVLV 325
WP_128745378 247 ALQKSIRGSDPDAAVHYLARLIHGGADIQMIGRRLLVMASEDIGMAYPTAITIVNSCVQAALMVGYPEAQINLAEAVVLL 326
WP_128742129 247 AFQKSMRGSDPDAAVHYLARLLEAG-DLPSACRRLMVCACEDVGLAYPLIIPIVKAAVDAALQVGLPEARIPLADAVVLV 325
WP_067876044 396 ATAPKSNAAYLGIDKAIADVRAGKAGRVPKHLRDAHYPGAKRLGHGKGYRYPHDDPIGVVGQEYLPDTL--RGAVYYEPT 473
WP_013484414 325 ATSPKSNSAYLAVDAALADIRAGRSGSIPRNLQNKHYDGADNARKGQFYKYPHGFPGRWVAQQYLPDAL--EGREYYHFA 402
WP_037304774 325 ATSPKSNSAYKAINFALEDVKNSGPLDFPRHLQNKHFDGADAKVRGQHYLYPHDYPDHWVKQQYLPDAL--KDRVYYEYG 402
WP_014118500 328 ATAPKSNSAHNAINAARADLRAGRTGDIPRQLQNVHADTT-GFDNRQNYKYPHNYPGHWVEQQYLPDAL--KNARYYEYG 404
WP_033117170 327 ATAPKSNSAHIALDEAMADVRTGKTGDYPRHLQNKHADSA-GMEREQGYLYPHDFPNHYVKQQYLPDRL--KGVHYYVYG 403
WP_065534813 327 ATAPKSNSVYEAIAAAQTDVRAGKTGDYPRHLQNVHADSA-GMEREQGYLYPHDFPRHWVRQQYLPDLL--ADRHYYRYG 403
WP_083273893 326 ACSPKSNSSIVAIEKAAADIRSRSIDPPPAHIMDAHYSGAKKRGIGDNYLYPHDF-GGYVKQQYLPDNLykEKRSYYNPS 404
WP_005934388 326 ATSPKSNSAHDAINAAIADVQAGRTGPIPRQLQNKHYDGEDALVKGQNYKYAHDYPNHWVEQQYLPDVL--KNTKYYTFG 403
WP_128745378 327 ASSPKSNASYMALDKAMNDIETKQIDDIPLHLKDSHYAGAQSRGIGLDYKYPHAY-GGYVKQQYLPDNLykAGVRYYEPT 405
WP_128742129 326 ACSPKSNSAYCAVDAAVADLRAGKTGPIPRRLQNKHYDGEDNPRKGQFYQYAHDFPHHWVRQQYLPDVL--KDTVYYRWG 403
WP_067876044 474 EHGNEREVSARLAKLRRIVR 493
WP_013484414 403 ENKTEQAAKTYWDAVKRKSE 422
WP_037304774 403 ENKSEQAAKAYWTKIKGDIN 422
WP_014118500 405 ENKTEKAARRYWEELKGKSQ 424
WP_033117170 404 ENKTEQAAKRYWDEIKGKEE 423
WP_065534813 404 DNKNEQAARRYWDEIKGPEA 423
WP_083273893 405 ENGSEKSIKERLEILRKR-- 422
WP_005934388 404 ENKNEQASRAYWARIKGEEN 423
WP_128745378 406 ENGSEAAFKKFLEGVRKING 425
WP_128742129 404 DNKTEQAFRKYWEEIKKEK- 422
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