6G7G


Conserved Protein Domain Family
Self-incomp_S1

?
pfam05938: Self-incomp_S1 
Plant self-incompatibility protein S1
This family consists of a series of plant proteins which are related to the Papaver rhoeas S1 self-incompatibility protein. Self incompatibility (SI) is the single most important outbreeding device found in angiosperms and is a mechanism that regulates the acceptance or rejection of pollen. S1 is known to exhibit specific pollen-inhibitory properties.
Statistics
?
PSSM-Id: 461784
Aligned: 184 rows
Threshold Bit Score: 46.8561
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6G7G_A         8 EIVIKNTLGPS-RILQYHCRSG--NTNVGVQYLNFKGTRIIKFKDD-GtERSRWNCLFRQ---GInmkFFT-EVEAYRPD 79  thale cress
EEF41296      34 HVHVVNGLSPG-KILFVHCKSA--DNNLGGYNVGNGQEFSWSFKMNfL-RRTLYWCRMAP---DN---QSYaDLKVFWDD 103
EEF41294      29 HVHIINEMKNH-KFLHVHCKSK--DDDLGIHHLQHGQQYSWHFNINiF-ATTLFWCYMSP---DH---KLHaRFDVFWDA 98 
EEF41295      25 yVHITNELSHN-KVLHVHCKSK--DDDLGIHQLPRSQHYSWRFNLNfF-ATTLFWCYMAP---DS---NSHaNFKVFWKS 94 
XP_002522115  77 GVHIINGL--RtRVLLSHCKSEddDDDLGINKISIGNEFSWEFTVS---GATVYWCYLAP---DS---NSHvNIRVFWNN 145
XP_006384775  34 KVNIVNQLSHN-KRLFVHCKSK--DDDLGPHHVQSKDRFVFRFVENfYwATTLFWCSMSK---DR---KSYaSFDVFWSA 104
XP_002312833  24 TVRIVNRLSNK-KVLFAHCKSG--DDDLGPQYIKTRDEFKFSFRVNfF-RTTLFWCNMSK---DK---KSHaSLDVFWSF 93 
XP_013683342  42 QVMVVNGLATS-ETLFIHCKSK--EDDLGEHTLRLGDRFSWNFGENmL-HSTLFWCYLSK---DD----GHmNVQVFWDD 110
F4JLS0        42 QVTVVNGLTTG-ETLFIHCKSK--EDDLGEINLKFRNRFSWNFGENmL-HSTFFWCYMNK---DN----GHmNVNVFWDD 110 thale cress
KRH19669      58 HVYIVNGLRNN-QNLLAHCKSA--DDDLGVRNLSQGSNFTWSFRTDfA-HSTLFWCHVKKdnnNA---CESaTFDVFWYD 130
6G7G_A        80 L-KHPLCGKR----------YELSARMDAIY 99  thale cress
EEF41296     104 KhLLDSCGDDh--------qCIWIAKDDGVY 126
EEF41294      99 KyLYDRCGPHd---------CWWVAKDDGAY 120
EEF41295      95 GyMDDRCAGHh---------CYWVAKDDGAY 116
XP_002522115 146 RhFYQNCDKYd---------CSWIAKDNGVF 167
XP_006384775 105 D-NHEKNKNFnlqgltgtreIIWLVRDDGIY 134
XP_002312833  94 S-NAGKHGGFdlstwavneeALWIVRDDGIY 123
XP_013683342 111 ViLFHRCGWKk---------CVWTAKTDGLY 132
F4JLS0       111 ViLFHRCGWKn---------CIWTAKTDGLY 132 thale cress
KRH19669     131 ErLFQKCDWKk---------CIWSARDDGIY 152
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap