Conserved Protein Domain Family
YcaQ

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COG3214: YcaQ 
DNA glycosylase YcaQ, repair of DNA interstrand crosslinks [Replication, recombination and repair]
Statistics
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PSSM-Id: 442447
Aligned: 215 rows
Threshold Bit Score: 295.557
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_129204324  57 PDRLSRAQARRVALAAQGLHRARTggsGPGLRQVTAVVRRLGLLQIDSVNVLARAHLMPAFSRLGPYDVGLLDRLSSrTP 136
WP_083816701  66 LASQAAAVARGQARPGAGSWPAARa--AGPPPGVEAVLKRLGAIQLDPVNVVERNHHLVLFNRVRGYRPEWLEALY--PQ 141
WP_013624155   1 MITLTNRQARQFILLKHGLLDEYKf---IGKQGALDFVRQAGCIQFDPVDSCGKNAELTLQSRVKGFTKQTLYELLY-RD 76 
WP_103082358   4 NVALTNKQARRFMLLKQGLIGDYKf---SGKQGVLDFVRQAGCIQFDPIDVCGKNPELVLQSRVEGFTKQMLYSLLY-ED 79 
WP_024363327   1 MIHLTNRQARQFLLLKHGLLDDYKf---SGKRGVLDFTRQAGCIQYDPIDVCGKNAELVLQSRIKEFTKGMLADLLY-VE 76 
WP_123039212   1 MIKLTNRQARQFLLLKHGLLDEYKf---IGKQGILDFVRQAGCIQYDPIDVCGKNSELVLQSRIKGFTKEMLHDLLY-KD 76 
WP_116226094   5 PQILTSATYRRFVLGAQGLWPARRw---AGKDGTAQAIRAAEAVQVDPVAVVAQSHDIALWGRVRGYSPQLLQELVY-SE 80 
WP_128752781   3 TYNLTNDQGRNFILLKQGLIGDYKf---EDKGGVCDYVRQAGCIQFDPIDICGKNPELVLHSRVLGFTKEMLYQLLY-ED 78 
WP_129886714   1 MLTIDIDTARRFILGKQGLWPGRRw---RGREGTEQAIRSMEYLQLDPLRIIARSQDIKLHSRVLDYAPDMWEELAY-QQ 76 
WP_095045502   2 TITIDIDTARRFILGKQGLWPGRRw---REPAGAAAAMRAIEYLQLDPLQIIARSQDIMLHSRVLDYTPGLWEEATY-GR 77 
WP_129204324 137 RRLVEAWAHEASFVPVETWPLLAWRRRAvrDHAW-G-SIASAAERHPAELAAVRAILAERGPVTSAQVHALLaeggaggR 214
WP_083816701 142 GRVFEGWCHARCLLPAAWYPAFRPAFRRh--------aDGDLDPAVREWMDRILAMVAASGPVSPRQIEAA--------D 205
WP_013624155  77 RKLVDYPDKNLSVIPIENWPYFERYRQAsrEG-------GLRFEGLAELEDQAKAYIKAHGPVSSDELPIQ--------G 141
WP_103082358  80 RKLLDYFDKNLSIIETTDWPYFRRYREAykTG-------GRSHDEVNAVCEEIKNIIREKGAVSSADIGFS--------D 144
WP_024363327  77 RSLVDYPDKNLSIITVEDWPYFERYREAarQH-------AKRYPEMEALTTLVRAHIQNHGALSSDDLKLD--------G 141
WP_123039212  77 RSLVDYPDKNLAIIPIEDWPYFERYRRAarQH-------AEHYPEMQALTEQVRAHIHKQGPISSDDIKLD--------A 141
WP_116226094  81 RQFFDYg-STLLIYPIEEFPYWHRRMLRrqQRPA----MVEYFEANAALLEQVRAEIRARGPLRSRDLQG---------- 145
WP_128752781  79 RKLIDYFDKNMSIFRVEDWEYFARLRENyrSY-------GRSHDKVDKVAGEIKGIIKEKGCVSSKDIDLK--------Q 143
WP_129886714  77 RKFFD-WGGWLAVRPMDELPHWRVVMRRerDGVYgDsRICRLGREHAVAIDEMRAILRERGTVSNRDFEMAKr------- 148
WP_095045502  78 REFFD-WGGWLAVRPMDELPHWRVVMRRehDGLAgDsRIARMGREHAEAVVEMRQILRERGTVTNRDFAMTTr------- 149
WP_129204324 215 PATD----EWg----WNWSAAKRVLEHLFFTGEVVSAGRSaQFERRYDLPERVLPRSVLDAp--PVTDAEAIRGLVEVGA 284
WP_083816701 206 RVIG----YWdrd-vpGTRAVSQALQHLWEEGRLVVRWRR-GNERWYDLPERVLPEAVRARd---LDDAEAAEQRLRHYA 276
WP_013624155 142 SIRWhssiHWsgnrgGSTNAARAVLEQLYATGELIIHHKK-GTRKYYDLAGNYLPAELLKAsdpLPDEFAHQKWRVLRRI 220
WP_103082358 145 TVDW----YW-----SNAKLSRAALETMYFRGELVVHHKK-GTTKYYDLAENCIDAELLNApepYPDELEHQKWRVLRRI 214
WP_024363327 142 DFSWqsaiHWs----SGNNPSRSVLEQMYSTGELIIHHKK-GSRKYYDLAKKYIQPNLLTAsepLVDELAHYKWRVLRRI 216
WP_123039212 142 NFSWrsaiHWs----GGNNTSRSVLEQMYSTGELIIHYKK-GTRKYYDIAGKYIQASLLNTpepLPSELEHLKWRVLRRI 216
WP_116226094 146 EKVY----RY-----RSTKDSGVAMYNLWLTGELTIHSRI-GRDRVYDFTDKLIPKKWLSTa----AKEETDAFFLHKAL 211
WP_128752781 144 MVDW----PW-----APTTLSRAVLETLYFRGDLIIHHKK-GNNKYYSLAEDYIEEMILNTedpNKTEDDFTKWQVLRRI 213
WP_129886714 149 TRTQ----HY-----RGRKDSALALYYLWRIGEVMTHHRK-NFERVYALTETVAPAHLINEs----DEVEADRFLIKKDI 214
WP_095045502 150 TRTD----SY-----RGRKDSALALYYLWRTGEVMTHHRE-RFERVYALAEAVAPAHLLYEs----EEAEVDRFVIKKEI 215
WP_129204324 285 RAHGVATLRDL---RDYFR-L----R-RGVTNalvpAAVRELVEDGVLVPVEVEGLRGPWYLHRDaa----------lPR 345
WP_083816701 277 QAMVLFDPGDPy--FGWQR-W----P-AARRR----EEAERRAAAGQWVRVEIEGVRRAYYAAAEdrdilq--nagdlPV 342
WP_013624155 221 GAVGILWNRPSdawLNIWG-L----K-SPQRN----DVFRELLEEGKILEVKVQDLKDILFCHAKdgslle--tvrqkDQ 288
WP_103082358 215 GAVGLMWNKPSdawLNIWE-L----K-SAQRN----EIFRQLLSEEKIMEVTVDGIKDKLYCLSTdrslle--avlqeTE 282
WP_024363327 217 GSVGLLWNRASdawLNIWG-L----K-AAQRK----EVFSQLLQEDRIVAITVDQMKDMLYCLAEdlplie--vvlqnPE 284
WP_123039212 217 GAIGLLWNRASdawLNIWG-L----K-SDERN----EVFRQLLNEAKIFAVAVEQMKDTLYCCMEdlllie--avlknPE 284
WP_116226094 212 AQHGLSTRREF---TRILKaLnehtPgDEEIQ----AKIDDLLNEDTLRAAQLEGSRETLYYLPDsqplld--elsagRV 282
WP_128752781 214 GSVGLLWNKASdawLGINK-F----N-GERRN----NIFSLLLSENKIVGCKVEGIQATLYFLKEdeelik--tvlsqDA 281
WP_129886714 215 SFSGLARPSRG---AESFRgYg--qP-DSVAK----DLLGAMLADGELIEVKVEGWKAVHYALGSdaavlhelcagrvPE 284
WP_095045502 216 SFDGLSRVKRT---AEGYMgRg--eP-DRAAK----SLLGQMLADGEVIEVRVAGWKAPHLALGSdaaalaevsagrvPA 285
WP_129204324 346 R---------ADGAALLSPFDPLVFERTRLEELFGTTYRIEIYVPAARRVHGYYVLPFLEGEHITARVDLKADRRaagGG 416
WP_083816701 343 L----------RAARFLPPLDNLLWRRTRLRDLFGFEYTWEIYLPAAKRRYGPYTMPVLYRNRLVGRIDLEFRQA---DR 409
WP_013624155 289 F---------KPRCELIAPLDCLMWDRRLIRALFDFDYTWEIYTPAAKRKYGFYVLPLLYHDSFIGRVEAIADNK---TN 356
WP_103082358 283 L---------RDRCELIAPLDNMLWDRRLIKTLFDFDYKWEIYTPKEQRKYGYYVLPLLYGDRFIGRVEAIRDSK---AK 350
WP_024363327 285 P---------KWRCELIAPLDNFLWDRKLITALFNFDYTWEIYTPVSKRKFGYYVLPLVYGERFIGRAEIIAERK---TG 352
WP_123039212 285 L---------KPRCELIAPLDNLIWDRKLINELFCFDYTWEIYTPVIKRKFGYYVLPLLYGENFIGRVEAIAERK---TR 352
WP_116226094 283 PaewalledkQEEVIFLAPLE-FVSARGRAKGIFQFEYTWEIYKPAHTRVYGPYTLPMLYGDRLVGRMDAKLDRP---NR 358
WP_128752781 282 F---------KQRLEFIAPLDNMLWDRKLIRALFDFDYKWEIYTPKSQRKYGYYVLPVLYGNRFVGRIEIVLDKK---VR 349
WP_129886714 285 Dwtpl-gtstTEEAVFLAPLDH-VCARGRAKVVFGFEYVWEVYKPEQQRKFGYYTLPVLWGDRLVARFDSKLDRA---TN 359
WP_095045502 286 Awrpl-dgdnTDEVAFLSPLDP-VSARGRAKVLFGFDYVWEVYKPVDKRQYGYYVLPILWGERLVGRFDSKLDRT---TN 360
WP_129204324 417 VLRVQSAHGEPAA---PGDrgaTAHRLAAELRAMAGWLGLADVVVAP--AGTSLPSLRGrwAVA 475
WP_083816701 410 TLTLQRLRIEPPFegrSGA---IRRAVAAEVKRLGHYLGAQTIDGp------------------ 452
WP_013624155 357 ILTVKNIWYEKSVk-qTKK---LQMMIERNISRFAEFNECNKVNCDRstVKTych--------- 407
WP_103082358 351 TLVVKNIWYERDVk-rTKE---LQTAIDDCLHKFAVFNECKKVSVTNls--------------- 395
WP_024363327 353 TLVVKNIWYENGVk-qTTQ---LRTALNNCLKKFAHFNGCETMSVEYlnE-------------- 398
WP_123039212 353 KLAVKNIWYENGVk-pTKK---LQTALDECLEKFAIFNGCETISIVEsn--------------- 397
WP_116226094 359 TLIVNGLWLEEGFh-aDAA---YQAAFERGLAHFARFLGAERVDK------------NK----- 401
WP_128752781 350 QLNVLNFWKEGNTk-iDDD---FYKLFQTEINQFMFFNHCETFKIkcki--------------- 394
WP_129886714 360 TFIILGLWLEDEAtghDEA---FAAALARGFARFITFLGASKLDATAirEPLLRQRVCAcsAFP 420
WP_095045502 361 TFVILGLWLEDEAlgrDEA---FAAALGRGFRRFVSFLGAEKEDATAvnEPLLRAQIAS----- 416
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