2XND,4MJN,3ZO6,1YCE


Conserved Protein Domain Family
ATP-synt_Fo_c

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cd18121: ATP-synt_Fo_c 
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membrane-bound Fo complex of F-ATP synthase, subunit c
Subunit c (also called subunit 9, or proteolipid) of the Fo complex of F-ATP synthase. The F-ATP synthase (also called FoF1-ATPase) consists of two structural domains: the F1 (factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons though the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts, or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Methanosarcina acetivorans.
Statistics
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PSSM-Id: 349414
Aligned: 304 rows
Threshold Bit Score: 37.3655
Created: 25-Jul-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2XND_J        7 FIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSlkQQLFSYAILGFALSEAMGLFCLMVAFLI 70  cattle
WP_039313472 12 AVGAGLAVIAALGAGVGIGNATSSLLKSIARQPEasGKLMSTYFIGCALAETTAIYGLLISFIL 75  Clostridium baratii
WP_015708845  8 ALGAGIAVVTGLGAGIGIGIATSGLMQAIARQPEsqGKLIPWFFVGMALAESTAIYGFVVAILL 71  Treponema primitia
OGO80744      8 AIGASIAVAAGVGAGISLGNACSKVAEGVSRNPEsaSKILSTALVFATLAEVTAIFCFVIAIML 71  Clostridiales bacterium GWC2_40_7
KKI51243      7 AIGAGLAVFTGMGAGIGMGIATSKACEAVARQPEatGKINQVLLIGLALAESTAIYGFVISIIM 70  Catabacter hongkongensis
WP_003865650  7 AIGVGMAALAVIGGGLGIGFATSSAVKAIAQQPEahGKIRSTLLIGAALAEATAIYGFVLGILI 70  [Eubacterium] biforme
WP_014253669  5 AFAISLALLACVTAGIGISFATAKAVEAVARQPEaaSKIQTVMLLGAALAEATAIYGFVIALLM 68  Clostridium clariflavum
WP_008520831  5 ALGAGIAVLTGVGAGIGIGLATGKACESIARQPEakNDVMKTMLLGCGLAEATAIYGFVVAMAV 68  Jonquetella
CDB51900      4 AIAAAIAVLTGVAAGLGIGLATGKAVDAIARQPEaaGDIRTALILGCALAEATAVYGLVIGILI 67  Clostridium sp. CAG:217
WP_045169416  3 ALAAAIAMLAGVGVGIGIGIATAKAAESVGRQPEafGRIFPLFLLGAALAEAVAIYSFVIAFML 66  Caldicellulosiruptor sp. Rt8.B8
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