Conserved Protein Domain Family
LPAM_1

?
pfam08139: LPAM_1 
Prokaryotic membrane lipoprotein lipid attachment site
In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognizes a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached. Analysis of lipoprotein and non-lipoprotein signal peptides reveals that the two classes differ significantly only in the region close to the signal peptidase cleavage site. This region is apolar and has the consensus sequence LA(G,A) 1C in the lipoproteins, but is polar and has small, uncharged residues in positions - 3 and - 1 in the non-lipoproteins. specialized signal peptide containing a lipobox motif in the carboxyl region of the signal peptide carries a cysteine residue which is the invariable target for lipidation by lipoprotein diacylglyceryl transferase (Lgt). Lipidation at this residue serves to anchor the lipoprotein to the membrane. Lipidation has been considered to be a prerequisite for the action of lipoprotein signal peptidase (Lsp), which removes the signal peptide and leaves the cysteine of the lipobox as the new amino-terminal residue of the mature lipoprotein.
Statistics
?
PSSM-Id: 429834
Aligned: 33 rows
Threshold Bit Score: 24.5714
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
CBS86564        1 MRKSrpaLLAAGAVAVLSGCS 21 
WP_036655093    1 MRRF---ILFFLIVVMLSACN 18  Paenibacillus wynnii
WP_008842564    1 MKKY---ILALLILVVVSACS 18  Aliiglaciecola lipolytica
WP_045965789    1 MKQT---IFVATLLLILSGCQ 18  Pseudoalteromonas
WP_067428350    1 MKRT---IVPLTMMLALSACS 18  Erwinia gerundensis
WP_044416723    1 MRRV---IVITVAALGLAGCS 18  Rhodopseudomonas palustris
EFE95896        1 MRKP---LIAISITLLVAGCS 18 
jgi:Deba_0002   1 MKKI---IFAALAIILVSGCA 18 
WP_013529278    1 MRKM---IIALVAVVAVSGCT 18  Mesorhizobium
WP_009602709    1 MNKM---TLTLVATLILSGCQ 18  Vibrio caribbeanicus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap