3J20,3BCH,3J60,1VI6


Conserved Protein Domain Family
uS2_euk_arch

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TIGR01012: uS2_euk_arch 
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ribosomal protein uS2, eukaryotic/archaeal form
This model describes the ribosomal protein of the cytosol and of Archaea, homologous to S2 of bacteria. It is designated typically as Sa in eukaryotes and Sa or S2 in the archaea. TIGR01011 describes the related protein of organelles and bacteria. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Statistics
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PSSM-Id: 273394
Aligned: 10 rows
Threshold Bit Score: 329.39
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3J20_B   4 EYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLAKFE-PQSILAVSVRLYGQKPVKK 82  Pyrococcus furiosus D...
P54109   5 ELLVPLDTYLASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE-PEDILAVSRRIYTMGPLEE 83  Methanocaldococcus ja...
O29132   7 EYLVPPDDYLAAGVHIGTQIKTGDMKKFIFKVRQDGLYVLDIRKLDERIRVAAKFLSRYE-PSKILLVAARQYAHKPVQM 85  Archaeoglobus fulgidu...
Q9YB45   7 ETLVPSELYRKAGVIYGTQICTRYMRQFVHRILPEGYYQLDYLKIDERLAMAAKFLSTFE-PEKIAVVSVRIYGQKPVRM 85  Aeropyrum pernix K1
P38983  10 MKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIEnPADVSVISSRNTGQRAVLK 89  Norway rat
O59295   4 EYLVPLDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFE-PQSILAVSVRLYGQKPVKK 82  Pyrococcus horikoshii...
Q08682  14 QKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIEnPQDIIVQSARPYGQRAVLK 93  thale cress
3BCH_A  43 MKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIEnPADVSVISSRNTGQRAVLK 122 human
3J60_A  14 QREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVAIEnPQDIIVQSARPYGQRAVLK 93  bread wheat
1VI6_A   8 EYLVPPDDYLAAGVHIGTQIKTGDMKKFIFKVRQDGLYVLDIRKLDERIRVAAKFLSRYE-PSKILLVAARQYAHKPVQM 86  Archaeoglobus fulgidus
3J20_B  83 FGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVLIVTDPRADHQAMREAVEIGIPIVALVDTENLLSYVDLAIPTNNKGRK 162 Pyrococcus furiosus D...
P54109  84 FGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVDRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKK 163 Methanocaldococcus ja...
O29132  86 FSKVVGSDYIVGRFIPGTLTNPMLSEYREPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSNNSSADVDLVIPTNNKGRR 165 Archaeoglobus fulgidu...
Q9YB45  86 MCERVGCKAITGRIIPGTFTNPNLEHYVEPDVVVVTDPRMDRQAVVEASKVGIPVVALVDTDNSIENIDLVIPANNRGRR 165 Aeropyrum pernix K1
P38983  90 FAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAH 169 Norway rat
O59295  83 FGEVTGARAIPGRFLPGTMTNPAVKNFFEPEVIIITDPRADHQAMKEAIEIGIPIVALVDTENLLSYVDLAIPTNNKGRK 162 Pyrococcus horikoshii...
Q08682  94 FAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKH 173 thale cress
3BCH_A 123 FAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAH 202 human
3J60_A  94 FAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQ 173 bread wheat
1VI6_A  87 FSKVVGSDYIVGRFIPGTLTNPMLSEYREPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSNNSSADVDLVIPTNNKGRR 166 Archaeoglobus fulgidus
3J20_B 163 ALALIYWILAREILYNRGEIQSREDFKIPVEEFEMKI 199 Pyrococcus furiosus DSM 3638
P54109 164 AVALIYYLLTREYLKNRGVITDDTKLPFTYEEFLEKA 200 Methanocaldococcus jannaschii DSM 2661
O29132 166 ALAIVYWLLAREIAKIRG-----QDFTYSIEDFEAEL 197 Archaeoglobus fulgidus DSM 4304
Q9YB45 166 SLALIYWILTREILRRRGVLKPDEDLDVSYEEFMARK 202 Aeropyrum pernix K1
P38983 170 SVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRD 206 Norway rat
O59295 163 ALALIYWILAREILYNRGEISSREEFKIPVEEFEMKI 199 Pyrococcus horikoshii OT3
Q08682 174 SIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFYRE 210 thale cress
3BCH_A 203 SVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRD 239 human
3J60_A 174 SIGCLFWLLARMVLQMRGTILPGHKWDVMVDLFFYRD 210 bread wheat
1VI6_A 167 ALAIVYWLLAREIAKIRG-----QDFTYSIEDFEAEL 198 Archaeoglobus fulgidus
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