Conserved Protein Domain Family
type_II_gspD

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TIGR02517: type_II_gspD 
type II secretion system protein D
In Gram-negative bacteria, proteins that have first crossed the inner member by Sec-dependent protein transport can be exported across the outer membrane by type II secretion, also called the main terminal branch of the general secretion pathway. Members of this family are general secretion pathway protein D. In Yersinia enterocolitica, a second member of this family is part of a novel second type II secretion system specifically associated with virulence (See ). This family is closely homologous to the type IV pilus outer membrane secretin PilQ (TIGR02515) and to the type III secretion system pore YscC/HrcC (TIGR02516). [Protein fate, Protein and peptide secretion and trafficking]
Statistics
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PSSM-Id: 274175
Aligned: 14 rows
Threshold Bit Score: 544.674
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
tigr:BMA2786          32 LNFVNADIDQVAKAIG-AATGKTIIVDPRVK-GQLNLVAER----PVPEDQALKTLQSALRMQGFALVQD-HGVLKVVPE 104 Burkhol...
AAK22160              37 LNVQDADIRVFIQDVA-KSTGTTFIIDPRVK-GTVTVASNG----PLNRRELFEVFLATLRANNFVATPAgNGAYRIEPS 110 Cauloba...
AAN66671              35 VNFVDTELGEFIDSVS-RITGTTFIVDPRVK-GKVTVRTVD----LHDADAIYDIFLAQLRAQGYATVDLpNGSVKIVPD 108 Pseudom...
P45758                30 ANFNNADIRQFVEIVG-QHLGKTILIDPSVQ-GTISVRSND----TFSQQEYYQFFLSILDLYGYSVITLdNGFLKVVRS 103 Escheri...
AAR33662              31 LNFNDVDIATMVKFIS-DLTGKNFVLDERVK-GKISIYSPS----KLTPDEAFSLFTSVLELKGFTLVQAgKVYKVVPTA 104 Geobact...
CAE79475             105 FDFPNVEISDIIRAIS-ELTGKNFIIDPGVR-GKITIIAPT----KITVSEAYKAFLSALAINGFTVVPSgSFLKVKSAR 178 Bdellov...
chgcsh:AE010300_1033  55 ANWRDTELNDFLKGMS-AILKKNILLDESLKgKKITIISQK----EIPIKNGFIFMKSVLESLGFGVVEEpDLISIVKIK 129 Leptosp...
tigr:MCA1123          56 LNFDDADLSEVTKVILgDTLKVNYVLSPKVT-GKVSLQTTR----PLTEDEMIPTLETLLRMNGAALIREgGMYKIEPDA 130 Methylo...
P29041                96 FNFEGESVQAVVKAILgDMLGQNYVIAPGVQ-GTVTLATPN----PVSPAQALNLLEMVLGWNNARMVFSgGRYNIVPAD 170 Xanthom...
WP_011552585          70 IYFDKVEIEKLVQTVA-DATCRTFILPENVR-GKISIIGPEngrvEVNADAFYSAFLAALDANGLAAYQYgRFMKIVDKR 147 Myxococ...
tigr:BMA2786         105 ADAKLQGVpty---ignAPQvrgDQVVTQVFELRNESANNLLPVLRPLISP--NNTITAYPANNTIVVTDYADNVRRIAQ 179 Burkhol...
AAK22160             111 ENAARQPS---------AAG---GQFATEVFRLRTLDAASAVEMLKPLVGP--QGQVVANPRGAVVVVADYADNVRRIRG 176 Cauloba...
AAN66671             109 QAARLEPVpve---aggQQGegsDSVATRVFSVRNAASEQVLGILKPLIDPr-VGVITPYPAAHQLVVTDWRSNLERIAS 184 Pseudom...
P45758               104 ANVKTSPGmia---dssRPGv-gDELVTRIVPLENVPARDLAPLLRQMMDAgsVGNVVHYEPSNVLILTGRASTINKLIE 179 Escheri...
AAR33662             105 AAKQSGMRlls----dkDRLpvsDAYVARIIPLERISAQEAVAFLQPIVSK--DGYIAAFGASNMLMVVDSALNIQKLTG 178 Geobact...
CAE79475             179 NAQRDNIEtfs-----gaYYpnaDQMITRIIHLKHISASQVNRDLRILPSK--DGEMNIYEPTNSIIISDYGSNIDRVMK 251 Bdellov...
chgcsh:AE010300_1033 130 DALARSPIvrvgkelipEEEvgdYRTITQVIPIENVKPEELEPILKRLTSP--NTDVIVYRNTNTIVLSGSAADINKLLV 207 Leptosp...
tigr:MCA1123         131 QAAISASGpg------vGLGmmePGYQLRVIPLRYISAAEMQKVLEPIMPP--KAVLRMDETRNLVMVAGTAEELGGVME 202 Methylo...
P29041               171 QALAGTVAps------tASPsaaRGFEVRVVPLKYISASEMKKVLEPYARP--NAIVGTDASRNVITLGGTRAELENYLR 242 Xanthom...
WP_011552585         148 SAKQNPIPtiv---eegEPYttnEQMVTKLFRVQNVEVEPLRGVLQQLVSK--DGDTIPYPP-DTIIINDVGSNIHRLER 221 Myxococ...
tigr:BMA2786         180 IIAGVDSAAg----SQVAVVPLKNANAIDIAAQLTKLLDPGa---------------------iGN-------------- 220 Burkhol...
AAK22160             177 LLAQVDQDR-----AMVHTVTLTHSSAREIAQVLNDMLATPg---------------------aEG-------------- 216 Cauloba...
AAN66671             185 LLRQLDRPQevpgsGSTQVIYLRHANAGEVVKVLRGLSQE---------------------------------------- 224 Pseudom...
P45758               180 VIKRVDVIGt----EKQQIIHLEYASAEDLAEILNQLISESh---------------------gKS-------------- 220 Escheri...
AAR33662             179 ILTLVDSPQk---rEGAEIIFLKNASADSVSGVIREWLGGKtsrpagq----------agqataTS-------------- 231 Geobact...
CAE79475             252 IISQLDVPGf---eEQLEVIPVKYAKSKDLADLVDKIVNKGnktqgsapgtftagvprfsrsagAT-------------- 314 Bdellov...
chgcsh:AE010300_1033 208 LVSEFDVKIe-------EATPGSISSAG---------------------------------------------------- 228 Leptosp...
tigr:MCA1123         203 AVQIFDVDYmr--gMSVALYPVKNADVPTIADELTKVLGLG-----------------------GK-------------- 243 Methylo...
P29041               243 TVQIFDVDWls--gMSVGVFPIQSGKAEKISADLEKVFGEQ-----------------------SK-------------- 283 Xanthom...
WP_011552585         222 IIHQLDTRAa---sDEMRIIQVQYASAQDVANTVQRLFEAK-----------------------GArpgqpaaagrnvpp 275 Myxococ...
tigr:BMA2786         221 ----------------TDATLKVTVQADPRTNALLLRASNaQRLAAAKKIAQQLD--APSGVPGNMHVVPLRNAEAVKLA 282 Burkhol...
AAK22160             217 ----------------KSGRGAVTVVPVDSSNSVLLRGDS-DAVQRLLPVIADLD--RRAESSDDVRVVFLRHANAEQML 277 Cauloba...
AAN66671             225 -------------------------------GAVPVEGAG-EAEGKDRPVVPAAG--GSG--------IRLEYEEG---- 258 Pseudom...
P45758               221 ----------------QMPALLSAKIVADKRTNSLIISGPeKARQRITSLLKSLD--VEESEEGNTRVYYLKYAKATNLV 282 Escheri...
AAR33662             232 ----------------SAG----VLIVPDTRLNALVIFGSdQDKDDIKKLIAMVDv-VPPTTSSKINVYYLENADATDVA 290 Geobact...
CAE79475             315 ----------------SQQGASFFMAIPDDRTNSIIVVGNkSGIVRIKKLISQLDfkIRAEESGGVYVYNVRHGDAEKIA 378 Bdellov...
chgcsh:AE010300_1033 229 --------------------------------DIHIYTLEySEAEKIAATLVKLDnpVIQSEDLGSERKPPPPGQPMPKV 276 Leptosp...
tigr:MCA1123         244 ----------------GAMGNVLRILPIERLNAILAVAPEmHLLHEVQDWIERLDr-YNTTRTGNVHVYRCQHVDAGELA 306 Methylo...
P29041               284 ----------------TPSAGMFRFMPLENANAVLVITPQpRYLDQIQQWLDRID---SAGGGVRLFSYELKYIKAKDLA 344 Xanthom...
WP_011552585         276 aaaqatpqagqgqegaTGGPVTLSQIIPDERTNKLIIVASpAAFERIQDIVGQID--IPTSGGGRINVYYLENANAEELA 353 Myxococ...
tigr:BMA2786         283 KTLRGMLGKGGGESGSSASSNDANAFNQGGSQSGSNFSTGASGTPPLPSGLssnssggaggttgggglgnagl------- 355 Burkhol...
AAK22160             278 PVLQQLVGQATTSVTTSSSRGLSNARTATGASTATTAPSAPVAATPSANGPqati------------------------- 332 Cauloba...
AAN66671                 --------------------------------------------------------------------------------     Pseudom...
P45758               283 EVLTGVSEKLKDEKGNARKPSSSGAMDNvait------------------------------------------------ 314 Escheri...
AAR33662             291 KVIDGLIKGTPTTP-----------GQPGVPAAAPVQSPFEGGKISVTPDK----------------------------- 330 Geobact...
CAE79475             379 QTLQGVTKDAAPKPATG-----GSLLSPLGSQGMQAPQEIFGGDVKITADK----------------------------- 424 Bdellov...
chgcsh:AE010300_1033 277 DKIKAVGHK----------------------------------------------------------------------- 285 Leptosp...
tigr:MCA1123         307 HTLGGIFGGGAGRQGPSLAPGLTGMDVGSGISSAFGSASATAGGFGGSSAGyggsggsfggsgssfgssgssgssmgstt 386 Methylo...
P29041               345 DRLSEVFGGRGNGGNSGPSLVPGGVVNMLGNNSGGADRDESLGSSSGATGGdiggtsngssqsgtsgsfggssgsgml-- 422 Xanthom...
WP_011552585         354 STLQSLAQGTGNAPRGRTPVPARPPGAPGGPTTTQAAELFS-GEVKISADK----------------------------- 403 Myxococ...
tigr:BMA2786         356 ----------------------------------------lggdkdkgddnqpggmiqadaASNSLIITASDPVYRNLRA 395 Burkhol...
AAK22160             333 ---------------------------------------------------------arfpGANALIINAPPETQRTLAE 355 Cauloba...
AAN66671             259 --------------------------------------------------------------TNAVVMVGPDSELAAYRA 276 Pseudom...
P45758               315 ----------------------------------------------------------adeQTNSLVITADQSVQEKLAT 336 Escheri...
AAR33662             331 -------------------------------------------------------------ATNSLVIMASPVDYQNILQ 349 Geobact...
CAE79475             425 -------------------------------------------------------------TTNSLIVTASKQDYDVVLN 443 Bdellov...
chgcsh:AE010300_1033 286 -------------------------------------------------------------ESNSVIVTATNAEWAEIRK 304 Leptosp...
tigr:MCA1123         387 gsmgtsgssgglgrsgsgglggsggglgtsggsfggarsgaggqgasmtqlgnnarvvadpANNALIVIAKPQDWKEIEA 466 Methylo...
P29041               423 ----------------------------------qlppstnqngsvtlevegdkvgvsavaETNTLLVRTSAQAWKSIRD 468 Xanthom...
WP_011552585         404 -------------------------------------------------------------GSNSLVIVASSADYKNIVQ 422 Myxococ...
tigr:BMA2786         396 VIDQLDSRRAQVYIEALVVELQATTSANLGIQWQVAN-----NALyagtNlVTGQTGLGNSIVNLTAGAVTNPggt---l 467 Burkhol...
AAK22160             356 VIRQLDVRREQVLVEAIVVEVTDGTAKQLGVQFLLGG-----TNGtipfVaTNYTNATPSLLPLVGAAATTTSgadteal 430 Cauloba...
AAN66671             277 IVEQLDIRRAQVVVEAIIAEVSDSSAQELGVQWLFAD-----EKfg--aGiVNFGSNGVNIASIAGAAASGDN------- 342 Pseudom...
P45758               337 VIARLDIRRAQVLVEAIIVEVQDGNGLNLGVQWANKN-----VG-----AqQFTNTGLPIFNAAQGVADYKKN------- 399 Escheri...
AAR33662             350 VIQKLDKRRRQVFVQALIAEVSLDKLKDVGVQIG-AL-----AVGtq----------gDASGGAVLDPFNFLS------- 406 Geobact...
CAE79475             444 ILSKIDTPRDQVFVEAIIMEMSVNDGNSWGIGYYQYG-----DSGygkvG------FNGLSNINDFLSPTGGS------- 505 Bdellov...
chgcsh:AE010300_1033 305 IIKVLDSARKQVLLEVLIVELTSSDLNDFGIDWRYKG------------------EAFGQFNSGLSKEANIIN------- 359 Leptosp...
tigr:MCA1123         467 VIKALDVLPLQVLIDATIVEISLKNDLQYGLKWLISS-----GS-----------STEALGSPLAALVKDFIN------- 523 Methylo...
P29041               469 VIEKLDVMPMQVHIEAQIAEVTLTGRLQYGVNWYFEN-----AVT----------TPSNADGSGGPNLPSAAG------- 526 Xanthom...
WP_011552585         423 VIQQLDKPRRQVFVEAVIMEVNLDRNARLGMNLHSGFslstsNGD----Q-VPGLIGTNTSGQGLPPSLSLTS------- 490 Myxococ...
tigr:BMA2786         468 gsLGSITNGLNIGWLHNMFGVQGLG------ALLQFFAGSSDANVLSTPNLVTLDNEEAKIVVGQNVPIPTGsysN--LT 539 Burkhol...
AAK22160             431 ksLRDAAVSSLLTASGVTSGVVGRSgdalfgAIINAVKKDTGSNLLSTPSIMTLDNEEARILVGQEVPITTG---E--VL 505 Cauloba...
AAN66671             343 ----EALGDLLSTTTGATAGIGHFGggfnfaMLVNALKGKSGFNLLSTPTLLTLDNAEASILVGQEVPFVTG---S--VT 413 Pseudom...
P45758               400 --GGITSANPAWDMFSAYNGMAAGFfngdwgVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSG------SQ 471 Escheri...
AAR33662             407 --ATS------GPQFLLVKALEELGknvsvsAQVKALVSDGAINVLSTPNILTSDNKEAEIFVGENVPFLSQtnlTt-GG 477 Geobact...
CAE79475             506 --GAVIGFGQGKTVEVTDPVSKTTLkipsllGFINFLKTAKKANILSTPQLMTLDNQEGELEVGDKVVVGENvqnVgtSG 583 Bdellov...
chgcsh:AE010300_1033 360 ---SNGQVNPNINTLSGFSLGFLKAgseqiiGILSANQGNENFNVLSAPQVLTVDNQEAEISVGQDVPVRTQsrnAg--T 434 Leptosp...
tigr:MCA1123         524 ----------GAASASGGFSYALIAnggnvkVLLNLLAQENLVNVISSPSLMVLNNQQAKINVGDQVPVLTGttaS---- 589 Methylo...
P29041               527 -----RGIWGDVSGSVTSNGVAWTFlgknaaAIISALDQVTNLRLLQTPSVFVRNNAEATLNVGSRIPINSTsinTg--- 598 Xanthom...
WP_011552585         491 --LASYGGFLAGIQGPVIPALEKLGipa-fgVVLHAMQQSSDVNVLSTPHILTSDNEEAEITVGQNVPFQSGfnpT--SL 565 Myxococ...
tigr:BMA2786         540 SGTTANA---------------------FNTYDRRDVGLTLHVKPQIT-EGGILKLQLYTEDSAVVpg--------tNTT 589 Burkhol...
AAK22160             506 GDSNANP---------------------FRTIQRQNVGIQLEVKPQIN-AGGGITLFLRQEVSSVA-----------GPV 552 Cauloba...
AAN66671             414 QN-NANP---------------------YQTIERKEVGVKLRIKPQIN-IDNSVRLDIVQEVSSIA-----------DTS 459 Pseudom...
P45758               472 TTSGDNV---------------------FNTVERKTVGTKLKVTPQVN-EGDAVLLEIEQEVSSVD------------SS 517 Escheri...
AAR33662             478 IS--------------------------QQSIERKDTGITLRITPQIS-EGEYVKLDIYQEISAVKen--------kGQA 522 Geobact...
CAE79475             584 TT--------------------------VRTPQFEDATIKLAIKPFISpASNQIRMEIKQQVAQLSta--------sTPK 629 Bdellov...
chgcsh:AE010300_1033 435 GGTNAVT---------------------VDNYEYRPTGIKLKFTPHVN-KNNKITLELFQEIKNIA------------EI 480 Leptosp...
tigr:MCA1123         590 ATIGTTQ---------------------FNQFQQQQSGVTLQIRPRVN-SGGLVSLEIFQAISTPSp----------VEV 637 Methylo...
P29041               599 -LGSDSS---------------------FSSVQYIDTGVILKVRPRVT-KDGMVFLDIVQEVSTPGarpaactaaatTTV 655 Xanthom...
WP_011552585         566 GSLGAGVgggagalgggllgglgglgslYAPITRQNVELKLTVKPQIN-ESDYIRLVINQQTEEIAs----------T-- 632 Myxococ...
tigr:BMA2786         590 SANSPGPTFTKRSIQSTVLADNGEIIVLGGLMQDNYQVSNTKVPLLGDIPWIGQLFRSEGKTRQKTNLMVFLRPVIINDR 669 Burkhol...
AAK22160             553 SVGSSELIINKREIETTALVDDGDIVVLGGLLDQQETQSAQRTPGLGDVPGLGALFRSTARERKKTNLMVFIRPRIIRSS 632 Cauloba...
AAN66671             460 --SASDVITNKREIKTKVMVEDNGLVILGGLISDELSTSDQRVPLLGDIPYLGRLFRSDATRNTKQNLMVFIRPRILRDG 537 Pseudom...
P45758               518 SNSTLGPTFNTRTIQNAVLVKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRDD 597 Escheri...
AAR33662             523 NDLVTTK----RSAKTAVVVKDKDTVVIGGLIQDRDTETINKIPLLGDIPLLGWLFKTKSTRREKTNLMIVLTPRIIRGA 598 Geobact...
CAE79475             630 AFQDSTQPLAKRSLKTVINVNNGDTVVLGGLMKEQDQESVTKVPLLGDIPIIGWLFKSRTIVKDKTNMVVFLTPKIVRNN 709 Bdellov...
chgcsh:AE010300_1033 481 ALAGGNPTFNRREIKTSISIENTQSIVIGGLISNDKQKRIIKIPFLGDIPYLGHLFKRTTEKIKKTNLMVFITPHILDSR 560 Leptosp...
tigr:MCA1123         638 GSGQKTFQFANREIQSVVAVPNGQTLALGGLISDKRSETQTGLPYLNQIPMIGWMFGSTEIKPERTELVVLITPRVVEKK 717 Methylo...
P29041               656 NSAACNVDINTRRVKTEAAVQNGDTIMLAGLIDDSTTDGSNGIPFLSKLPVVGALFGRKTQNSDRREVIVLITPSIVRNP 735 Xanthom...
WP_011552585         633 -DPVLGPTTSRRSAKTTVIARDQETLVIGGIMQDRTLESVSKVPLLGDIPLLGHLFRDTTRRKTKTNLLLFLTPYIIRGP 711 Myxococ...
tigr:BMA2786         670 ETAQAVT 676 Burkholderia mallei ATCC 23344
AAK22160             633 ADARNLT 639 Caulobacter crescentus CB15
AAN66671             538 PSLAGLS 544 Pseudomonas putida KT2440
P45758               598 DVYRSLS 604 Escherichia coli K-12
AAR33662             599 EEMNDVS 605 Geobacter sulfurreducens PCA
CAE79475             710 IEANAIV 716 Bdellovibrio bacteriovorus HD100
chgcsh:AE010300_1033 561 ETADKMT 567 Leptospira interrogans serovar Lai str. 56601
tigr:MCA1123         718 GDINSIS 724 Methylococcus capsulatus str. Bath
P29041               736 QDARDLT 742 Xanthomonas campestris pv. campestris str. ATCC 33913
WP_011552585         712 EDFRVIF 718 Myxococcus xanthus
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