Conserved Protein Domain Family
7tmA_OR1E-like

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cd15236: 7tmA_OR1E-like 
olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320364
Aligned: 7 rows
Threshold Bit Score: 408.387
Created: 11-Dec-2013
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q8NGS3        25 AVFFALFLGMYLTTVLGNLLIMLLIQLDSHlhtPMYFFLSHLALTDISFSSVTVPKMLMNMqtqhLAVFYkgCISQTYFF 104 human
XP_004594110  25 NLFYVLFLAMYLTTVLGNLLIIVLIRLDSHlhtPMYLFLSNLSFSDLCFSSVTVPKLLQIMnsqdPSIPYaaCLTQMYFF 104 American pika
NP_001000831  25 NVFFTLFLAMYLTTVLGNLLIILLIRLDSHlhtPMYFFLSHLAFTDISLSSVTVPKMLMNIqaqqHSISYkgCISQMYFF 104 Norway rat
P47887        25 NLCYALFLAMYLTTLLGNLLIIVLIRLDSHlhtPVYLFLSNLSFSDLCFSSVTMPKLLQNMqnqdPSIPYadCLTQMYFF 104 human
XP_004375865  25 GMFFALFLGMYLTMVKGNLLIILLIRLDSRlhtPMYFFLSHVAFSDVSFSSVTIPKMLINMhtqdQSIPYvdCISQMYFF 104 Florida manatee
XP_005974027  25 GVFFALFLSMYLTTVLGNLLILLPIRLDPRlhtPMYFFLSHLGLTDVSFSSVTLPKMLVNMqtrcQAITYagCISQVYCI 104 chiru
ELR51046      25 GVFFALFLGVYLTTVLGNLLILLLIRLDPRlhtPMYFFLSHLALTDVSFSSVTLPKMLMNMqtrcQAITYagCISQVYCF 104 Bos mutus
Feature 1        #  #                                                                # #####     
Q8NGS3       105 IFFADLDSFLITSMAYDRYVAICHPlhYATIMt--------------------QSQCVMLVAGSWVIACACALLHTLLla 164 human
XP_004594110 105 LFFGDLESFLLVAMAYDRYVAICFPlhYTSIMs--------------------PMLCLTLVALSWVLTTFHALLHTLLma 164 American pika
NP_001000831 105 VLFGCLDNFLLAVMAYDRYVAICHPlhYITIMr--------------------EELCFFLVAASWFFCCVHALLHTLLli 164 Norway rat
P47887       105 LYFSDLESFLLVAMAYDRYVAICFPmhYTAICfllhy-----------taimsPMLCLSVVALSWVLTTFHAMLHTLLma 173 human
XP_004375865 105 TFFVCLNNLLLIVIAYDRFVAICHPlhYTTIMr--------------------EELCILLVVGFRFFSCVHVLLHTLLls 164 Florida manatee
XP_005974027 105 IFFSCLDSFLLAVMAYDRYVAVCHPlhYTAIMr--------------------DELCVILVAGCWLAACAQALLHTLLvd 164 chiru
ELR51046     105 IFFGCLDSFLLAVMAYDRYVAVCHPlhYTAIMrdelcvilvagqplhyaitmnSQRCILLVAGSWVVTTFHALVHTLLvt 184 Bos mutus
Feature 1                                       #  ### ### ##                                    
Q8NGS3       165 qLSFCADHIIPHY-FCDLGALLKLSCSDtslNQLAIFTAALTAIMLPFLCILVSYGHIGVTILQip-stKGICKALSTCG 242 human
XP_004594110 165 rLFFCADNVINHF-YCDLPQLFQLSCSStqlNELLLFAVGFIMAGTPVALIVTSYANVAAAVLRir-saEGRKKAFSTCG 242 American pika
NP_001000831 165 qLSFCASNIIHNF-FCDLTPLLELSCSDislNKLVIFTEGGLLFILPLSSVMGSYILIGCTALKap-stKRFIKTFSTCG 242 Norway rat
P47887       174 rLCFCADNVIPHF-FCDMSALLKLACSDtrvNEWVIFIMGGLILVIPFLLILGSYARIVSSILKvp-ssKGICKAFSTCG 251 human
XP_004375865 165 rLSFCADNTIPYF-FCDLTALLKLTSSAiylKELVIFTEGGVLVVLPLSAILGSYVSIGATILKvp-stKWICKALSTCG 242 Florida manatee
XP_005974027 165 qLTFCAGTVIPHFcDLAVVLKSSCSNTSl--NELLILTEGGLIFTLPLGGILGSYIRMAAIILKvpsltRIFKALSTCGS 242 chiru
ELR51046     185 rLSFCGPNVIPHF-FCDLVPLLKLACSSthvNDMVLILVAGTLLIAPFVCILTSYFYIALAILGid-spKGKQKAFSNCT 262 Bos mutus
Feature 1                 #  ## ##  #     ## ###  #  ##                          
Q8NGS3       243 SHLSVVTIYYRTIIGLYFLPpssnTNDKNIIASVIYTAVTPMLNPFIYSLRNk-----DIKGAL 301 human
XP_004594110 243 SHLTVVAIFYGSGIFNYMRLgstkLSDKDKAVGIFNTVINPMLNPIIYSLRNp-----DVQAAL 301 American pika
NP_001000831 243 SHLLVVFLYYGTVACEYFFSsfqnSSDKDIVASVFYAVVTPLMNPFIYSLRNr-----DIKQAL 301 Norway rat
P47887       252 SHLSVVSLFYGTVIGLYLCPsansSTLKDTVMAMMYTVVTPMLTPFIYSLRNr-----DMKGAL 310 human
XP_004375865 243 SHLSVVFLYYGTLAIIYFFPssnnSQIKDIIASVMYTVVTAMLNPFIYNLRNr-----DMKLAL 301 Florida manatee
XP_005974027 243 HHLFVVFLYYGTIAGVYYFPssgnSKVKDIVASLMYTVVTPTEQQPLLFGLFlgmylvTVWGNL 306 chiru
ELR51046     263 SHLSVVSLFYTTAIGVYLCPpsspSGGKDRVFSVMYMVVTPLLNPFIYSLRNr-----DIKGAL 321 Bos mutus

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