Conserved Protein Domain Family
PRK01109

?
PRK01109: PRK01109 
ATP-dependent DNA ligase; Provisional
Statistics
?
PSSM-Id: 234900
Aligned: 37 rows
Threshold Bit Score: 864.667
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
124027312   3 MPFSVLAETFEKLERVTARTQMLLYLVELFKKTPPEIIDKVVYFIQGKLWPDWKGLpELGIGEKMLIKAASIALHVSEKQ 82 
14520759    1 MRYIELAQLYQKLEKTTMKLIKTRLVADFLKKVPEDHLEFIPYLILGDVFPEWDER-ELGVGEKLLIKAVSMATGIDSKE 79 
18978007    1 MRYLELAQLYQKLEKTTMKLIKTRLVADFLKKVPDDHLEFIPYLILGEVFPEWDER-ELGVGEKLLIKAVAMATGIDAKE 79 
14591397    1 MKYIELAQLYQKLEKTTMKLIKTRLVADFLKRVPEDHLDFIPYLILGDVFPEWDER-ELGVGEKLLIKAVSMATGVDPKE 79 
240103775   1 MRYSELAELYRRLEKTTLKTLKTKFVADFLKKTPDDLLEIVPYLILGKVFPDWDER-ELGVGEKLLIKAVSMATGVPEKE 79 
57642075    4 MRYSELADLYRRLEKTTLKTLKTKFVADFLKKTPDELLEIVPYLILGKVFPDWDER-ELGVGEKLLIKAVSMATGVPEKE 82 
212224666   4 MKYTELSDLYRRLEKTTLKTLKTKFVADFLKKTPDELLEVVPYLILGKVFPDWDER-ELGVGEKLLIKAVSMATGVQERE 82 
16082164    1 MLFSVVADAFEKMESTTKRLELTDLLVNLLKEA-DDDLPLLIYLLEGKLGPDYLGI-ETQMSDKLIIKALSVASNISEDE 78 
13542068    1 MKFSLVTDAFEKMSKTTKRTELTEILVELLKSA-DEDLQSLVYLIEGKLAPDYQGI-ETQMSDKLIIKALSIVSNIPEEA 78 
48477744    6 MDFSDVASYFSRMEETTKRLELTSILAELFKRS-GDDLKKLVYLVQGKLMPDYLGI-ELGLSDKLIIKSLSKASGRSEED 83 
124027312  83 IEQLVKKLGDTGKAIEMIKREKQQKQkavgllafmqkpsGGESTLTVEKVYDTLARIALVQGEGSRDIKLKLLAGLLAEA 162
14520759   80 IENSVKDTGDLGESIALAVKKRKQKS-------------FFSQPLTIKRVYQTLVKVAETTGEGSQDKKMKYLANLFMDA 146
18978007   80 IEESVKDTGDLGESIALAVKKKKQKS-------------FFSQPLTIKRVYQTLVKVAETTGEGSQDKKVKYLADLFMDA 146
14591397   80 IENSVKDTGDLGESIALAIKRRKQKS-------------FFSQPLTIKRVYQTLVKIAETTGEGSQEKKMKYLANLFMDA 146
240103775  80 IENSIKDTGDLGESVALALKKRRQKS-------------FFSQPLTIKRVYNTFVKVAEASGEGSQDRKMKYLANLFMDA 146
57642075   83 IEDSVRDTGDLGESVALAIKKKKQKS-------------FFSQPLTIKRVYDTFVKIAEAQGEGSQDRKMKYLANLFMDA 149
212224666  83 IENSVKDTGDLGESVALALKKKKQKS-------------FFSQPLTIKRVYQTFIKIAEASGEGSQDRKLKYLANIFMDA 149
16082164   79 IAKEYAKAGDIGTIAKEIAEKRSLRS-------------LVQEEMTVKYIHDTLMKMARTTGSGSTKARVDAYMDLFLNS 145
13542068   79 VSETYSKLGDIGSVAREIAAKKNMRS-------------LVNEDLTVKYVHDTLMRMAKTSGSGSTKARIDAYVDLALSG 145
48477744   84 INRIFSRLGDLGSTAEEISSSGIQRP-------------LLKESLTVDYVYNQLIKISGYTGHGSIKTKMDAYIDLLINS 150
124027312 163 SPREAKYIARFVEGRLRLGVGDATIMEALAVVYGgsaAMRSVVERAYNLRADLGMVAKILATQGIDALKNIKPEVGVPIR 242
14520759  147 EPIEAKYIARTVLGTMRTGVAEGLLRDAISLAFN---VKVELVERAYMLTSDFGFVAKIAKTEGNDGLAKVTIQIGKPIK 223
18978007  147 EPLEAKYLARTILGTMRTGVAEGLLRDAIAMAFH---VKVELVERAYMLTSDFGYVAKIAKLEGNEGLAKVQVQLGKPIK 223
14591397  147 EPLEAKYLARTVLGTMRTGVAEGLLRDAIALAFH---VKVELVERAYMLTSDFGFVAKIAKAEGNEGLEKVTIQLGKPIK 223
240103775 147 GPEEGKYIARTVLGTMRTGVAEGILRDAIAEAFK---VKVELVERAYMLTSDFGYVAKIAKLEGNEGLSKVSIQIGKPIR 223
57642075  150 EPEEGKYLARTVLGTMRTGVAEGILRDAIAEAFR---VKPELVERAYMLTSDFGYVAKIAKLEGNEGLSKVRIQIGKPIR 226
212224666 150 QPEEGKYIARTVLGMMRTGVAEGILRDAIAEAFK---VKAELVERAYMLTSDFGYVAKVAKLEGNDGLGKVHIQIGKPIR 226
16082164  146 TPKEIMYITRIITGKLRIGISDATILDAIVKAFAd-eKYSEDIENAFNFHPDLGYIASELRKGNIDAILKLGPTPMIPFK 224
13542068  146 TPADLMYITRIITGKLRIGVSDATILDAIILAFSd-eKYSEEIENAYNFHPDLGYIAVQLRLGNLESVINMGPTPMVPFK 224
48477744  151 GPMEIKYITRIITGKLRLGVADSTILDGLIEAFSe-kKYADDIETAYNFHPDLGYIAENLMMGNINELLNAGPVPLIPFK 229
124027312 243 PMLAERLNDPVEIIKKLGGRALVEYKYDGERAQIHKKGDKIWIFSRRLENITHMYPDVVEMAKKGIKAEEAIVEGEIVAI 322
14520759  224 PMLAQQAANIKEALLEMGGEAEFEIKYDGARVQVHKDGEKVTIYSRRLENVTRAIPEIVEAIKEALKPTKAIVEGELVAI 303
18978007  224 PMLAQQAASIRDALLEMGGEAEFEIKYDGARVQVHKDGSKIIVYSRRLENVTRAIPEIVEALKEAIIPEKAIVEGELVAI 303
14591397  224 PMLAQQAANIKEALLEMGGEAEFEIKYDGARVQVHKDGEKVIIYSRRLENVTRAIPEIVEAIKEAIEPEKVIVEGELVAI 303
240103775 224 PMLAQNAASVKDALIEMGGEAAFEIKYDGARVQVHRDGDKVIIYSRRLENVTRSIPEIVEAVKASLKPSKVIVEGELVAV 303
57642075  227 PMLAQNAASVKDALIEMGGEAAFEIKYDGARVQVHKDGDKVIVYSRRLENVTRSIPEVIEAIKAALKPEKAIVEGELVAV 306
212224666 227 PMLAQNAASVKEALLEMGAEAAFEIKYDGARVQVHKDGDRVVIYSRRLENVTRSIPEVVDAIKASIKSEKAIVEGELVAV 306
16082164  225 VMLAERLRSVEEILEKMGGRCAFEYKYDGMRTETHIERGKVRLFSRGNEETTNQFPDITKAASETFKVDSAILDGEAVPY 304
13542068  225 VMLAERLRSVDEIVQKMNGKCAFEYKYDGMRTEIHIVDEKVRLFSRGNEETTGQFPDIVKSAKETFHVSSVILDGEAVPY 304
48477744  230 VMLAERLQSISDIRNKMGHNASYEYKYDGLRTQLHFLKGGIKIFSRGLEETTSSFPDIVQNFKSYYSFDSCIIDGESVPY 309
124027312 323 DpETGEFRPFQVLMHR-RRKKDVHAVLSEIPVAVFLFDTLYVNGEDLTLKPLPARHEVLEKIIEQSDTWRIAEGIVTSDP 401
14520759  304 G-EDGRPLPFQYVLRRfRRKYNIEEMMEKIPLELNLFDVLYVDGVSLIDTKFMERRKKLEEIVETNGKVKIAENLITKNV 382
18978007  304 G-ENGRPLPFQYVLRRfRRKHNIEEMMEKIPLELNLFDVLYVDGQSLIDTKFIDRRRTLEEIIKQNEKIKVAENLITKKV 382
14591397  304 G-EEGRPLPFQYVLRRfRRKHNIEEMMKKIPLELNLFDVLYVDGKSFVDTKFIERRKKLEEIVKPNGKIKVAENLITKNA 382
240103775 304 G-ENGRPRPFQYVLRRfRRKYNIEEMIEKIPLELNLFDILYVNGESLIDTKFTERRKRLEESVEESDKIKLAEQLVTKKV 382
57642075  307 G-ENGRPRPFQYVLRRfRRKYNIDEMIEKIPLELNLFDVMFVDGESLIETKFIDRRNKLEEIVKESEKIKLAEQLITKKV 385
212224666 307 G-EGGRPRPFQYVLRRfRRKYNIEEMIEKIPLELNLFDVLYVDGEPLIDTPFRERRAKLEEIVEEGEKLKLAQQLVTKKV 385
16082164  305 DpDTGELYPFQVISHRrGRKYDLDKVSSEIPITVFLFDIVYLNGRDLSKTPYTERRKILESIFTESDSFRLAKRIESGDP 384
13542068  305 NpETGELYPFQVISQRrGRKYDLDKVSNEIPITVFLFDIVYINGKDLSKTPYAERRRILEGLFKENDNFKLAKRIVSSDT 384
48477744  310 NpETGELYPFQMVSKRrGRKYELTEKTREVPIVMFIFDILYLNGKSLVNLPYPERRSILEKNFKENEYFKLAKRIVSDDE 389
124027312 402 QELESFFLKAIEDGAEGVMAKAIhdRSIYQAGARGWLWIKYKrdyksEMSDTVDLVVIGAFYGKGRRGGKFGALLMAAYD 481
14520759  383 EEAEQFYKRALEMGHEGLMAKRL--DAVYEPGNRGKKWLKIK-----PTMENLDLVIIGAEWGEGRRAHLLGSFILGAYD 455
18978007  383 EEAEAFYKRALEMGHEGLMAKRL--DAVYEPGNRGKKWLKIK-----PTMENLDLVIIGAEWGEGRRAHLFGSFILGAYD 455
14591397  383 EEAEKFYKRALEMGHEGLMAKRL--DAVYEPGNRGKKWLKIK-----PTMENLDLVIIGAEWGEGRRAHLFGSFILGAYD 455
240103775 383 DEAEEFYKRALELGHEGLMAKRL--DAIYEPGNRGKKWLKIK-----PTMENLDLVIIGAEWGEGRRAHLLGSFLVGAYD 455
57642075  386 EEAEAFYRRALELGHEGLMAKRL--DSIYEPGNRGKKWLKIK-----PTMENLDLVIIGAEWGEGRRAHLLGSFLVAAYD 458
212224666 386 EEAEEFYKKALELGHEGLMAKRL--DSVYEPGNRGKKWLKIK-----PTMEDLDLVIIGAEWGEGRRAHLLGSFLVAAYD 458
16082164  385 AEVHRFFNSAIEDGCEGLVAKSTspDSFYKAGARGWLWIKLKrdyqaQLWDTLDLTVVGAFYGHGRRKGTYGALLLATYN 464
13542068  385 GTITKFFNQAIEDGCEGLVAKSMadDSYYKAGARGWLWIKLKrdyqaQLWDTIDLTVVGAFMGHGRRSGTYGALLLATYN 464
48477744  390 HDIMKFFERSIEEGCEGIVAKSNgiDSIYRAGARGWLWIKFKrdyqsELSDSLDLVVVGAFDGHGRRKGTFGALLLACYN 469
124027312 482 PDTDTFKSVCKVGSGFTDEDLERLDDMLKPYISDKKPARVdsqmkpdvWVEPTLVAEIIGAELTLSPIHTccygwvksgA 561
14520759  456 PETGEFLEVGKVGSGFTDDDLVEFTKMLKPLIIKEEGKRV--------WIQPKVVIEVTYQEIQKSPKYR---------S 518
18978007  456 PETGEFLEVGKVGSGFTDDDLVEFTKMLKPLIIKEEGKRV--------WLQPKVVIEVTYQEIQKSPKYR---------S 518
14591397  456 PETGEFLEVGKVGSGFTDDDLVEFTKMLKPLIVKEEGKRV--------VIQPKIVIEVTYQEIQKSPKYR---------S 518
240103775 456 PESGEFVPVGKVGSGFTDEDLVEFTKMLKPLIIREEGKFV--------EIEPKVVIEVTYQEIQKSPKYK---------S 518
57642075  459 PHSGEFLPVGKVGSGFTDEDLVEFTKMLKPYIVRQEGKFV--------EIEPKFVIEVTYQEIQKSPKYK---------S 521
212224666 459 PHSGEFVPVGKVGSGFTDEDLVEFTKMLKPLIIGGEGKFV--------EIEPKVVIQVTYQEIQKSPKYR---------S 521
16082164  465 DKNDTFETVCKLGSGFSDDVLFSLPKKFEQYVSKEKPARVisnlepdvWFYPAVVMEVIGAEITVSPIHTcaygeiekdS 544
13542068  465 EKNDTFETVCKLGSGFTDDVLFSLPKRFAEFVSKEKPARVvstiepdvWIYPSIVMEIIGAEITISPVHTcafgiiekdA 544
48477744  470 SKDDTFETVCKLGSGFTDEMLSEMPRLLGDKIVEKKPARVnssmepdhWIYPSLVLEIRGAEITVSPVHTcamniiekgS 549
124027312 562 GISIRFPRFI-RWRPDKGPEDATTTKELYEMYKRQLRRIKEE 602
14520759  519 GFALRFPRYV-ALREDKGPEDADTIERIAQLYELQERMKGKV 559
18978007  519 GFALRFPRFV-ALRDDKGPEDADTIERIAQLYELQEKMKGKV 559
14591397  519 GFALRFPRYV-ALRDDKGPEDADTIERIAQLYELQERIKGKV 559
240103775 519 GFALRFPRYV-ALREDKSPEEADTIERVAQLYELQERFKAKR 559
57642075  522 GFALRFPRYV-ALREDKSPEEADTIERVAELYELQERFKAKK 562
212224666 522 GFALRFPRYV-ALREDKSPEEADTIERIAQLYEFQERFKAKK 562
16082164  545 GLSVRFPRFTgKWREDKKPEDSTTSREILEMYKEQKKTITEE 586
13542068  545 GLSIRFPRFTgKWRDDKKPEDSTTTQEIIEMYKEQKKTLTEE 586
48477744  550 GLALRFPRLI-KPRDDKKPEDATTTNEIIEMYKAQKKVIEKS 590
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap