2JZY,2PMU,2OQR,2D1V,1YS6,2GWR


Conserved Protein Domain Family
Trans_reg_C

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smart00862: Trans_reg_C 
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Transcriptional regulatory protein, C terminal
This domain is almost always found associated with the response regulator receiver domain. It may play a role in DNA binding.
Statistics
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PSSM-Id: 214866
Aligned: 2322 rows
Threshold Bit Score: 29.8278
Created: 14-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2JZY_A        24 GKKIHLTGKEYVLLELLLQR--TGEVLPrSLISSLVWNMNf------DSDTNVIDVAVRRLRSKIdDDf-EP---KLIHT 91  Klebsiella pneu...
YP_739280     21 DESWHlPRAELQVLSLLVEH--QGKLVSkHELKTgdGAHp-------PLTDTSLARAVFMIRSFLgPq--yE---GLIET 86  Shewanella sp. ...
YP_001367724  23 DESWHlSRAELQVLTLLLEH--QGQLVSkHMLKTgdRQGp-------PLTDASVSRAISTLRSFLgPq--hE---GLIET 88  Shewanella balt...
YP_928621     21 GDVWHlPRAEAQVLRLLLSQ--ADRVVSkAELRQgdDEHg-------ELSDSSVARAVFMIRSFLgPg--sE---LLIET 86  Shewanella amaz...
YP_001472622  21 GDVWHlPRAELQVLKLLIAN--RNRIVAkQKLGAadEEHp-------PLSDSSVTRAVFMLRSFLgPe--hE---QLIET 86  Shewanella sedi...
YP_001092891  21 GEEWHlPRAELQVLLLLLAN--SDKVVAkRVLGAgdDDHp-------PLSDSSVARAVFMLRSFLgPl--hE---HMIET 86  Shewanella loih...
YP_508330    144 NLEFKlTDAAMETLSVLAEArlDDDVLTgAQIESmvSGKHe-----tDVDEAAGATRIKRLRDTLgNQmvsE---LLIKN 215 Jannaschia sp. ...
YP_002527224 128 DMEFSlTEAAIETLSVLAEArmDDDMLSgAQIEAviSGKNv-----tDCDEAAGATRVKRLRDALgNQlvsE---LLVKT 199 Rhodobacter sph...
YP_168650    144 NMEFQlTPAAIETLAVLAEArmDDDVLSgAQIEAviSGRDa-----sDCEEAAGATRIKRLRDTLgNQmisA---LLVKN 215 Silicibacter po...
YP_423664    154 GRPVDLTVGEFSMVEALAAK--AGRDVSyRELYDSGRGKGfhggageDGYRTNVRAAIKRIREKFkT---VdpdfEQIGN 228 Magnetospirillu...
2JZY_A        92 VRGAGYVL 99  Klebsiella pneumoniae
YP_739280     87 VKGQGYLL 94  Shewanella sp. MR-7
YP_001367724  89 VKGQGYLL 96  Shewanella baltica OS185
YP_928621     87 VKGQGYRL 94  Shewanella amazonensis SB2B
YP_001472622  87 VKSKGYRL 94  Shewanella sediminis HAW-EB3
YP_001092891  87 VKGKGYRL 94  Shewanella loihica PV-4
YP_508330    216 IARRGYIL 223 Jannaschia sp. CCS1
YP_002527224 200 VARRGYML 207 Rhodobacter sphaeroides KD131
YP_168650    216 IAKRGYML 223 Silicibacter pomeroyi DSS-3
YP_423664    229 YPGFGYVW 236 Magnetospirillum magneticum AMB-1
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