Conserved Protein Domain Family
LapB

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COG2956: LapB 
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis]
Statistics
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PSSM-Id: 442196
Aligned: 485 rows
Threshold Bit Score: 39.7123
Created: 9-Feb-2022
Updated: 24-Feb-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_041263810   55 KPQDGLN----LLK-TEL---------D--A---DTQNTELLYYTGF-Y-L--E-----QLKN----IPK--------A- 93  
WP_012505467  885 kwkEAED----ILL-ESL---------Y--I---DAEQLHPRTELSK-I-Y--Q-----QQKK----WKE--------A- 923 
WP_014487113  900 KIQGALDikprDFEtRITfgyyyrkkgEkeLsveD-------YTLGEeL-YndMlvytdKKKEketiYDErgllmisrAr 971 
WP_014856656   44 NYENAIK----KYQ-EAL---------Q--T----SQDyRIYYQLG--VaY--K-----KQNK----LPE--------A- 81  
WP_014856718  119 DDSSAV-----VYK-KII---------E--I---EPNNINAYYSLAQ-L-Y--E-----K--------NKpl-----eA- 155 
WP_081719633   14 KLQRKGR----DME-QLN---------Q--S---DPQYIKAMSEFmqgnws----------------------------- 45  
WP_045475624  224 mylKSIK----IAE-AVEetea--tleN------KQSLaTKYSNLSA-L-Y--A-----KQND----WSQ--------A- 268 
WP_014147904  213 DIDAVIA----DYQ-DLI---------R--I---FPEKDELKYALAK-I-Y--S-----AAKK----NQE--------A- 251 
WP_062477752   18 KWQSALD----LCQ-RSL---------H--Ra-eDSHKHYFSELLAE-I-Y--M-----AMGL----FKE--------A- 58  
WP_124878675    4 EMER-----------------------------------------G----F----------------------------- 9   
WP_041263810   94 --VEL---------YKEAI----K--------------IDk-----TNF----EAN-YR-----LG------FLY----- 118 
WP_012505467  924 --EDI---------LLESL----Y--------------IDa-----EQL----HPR-TE-----LS------KIY----- 948 
WP_014487113  972 tlVEpnyydiaynnYRDMInffgDgvvprkramlikiyQDn----yEQV----KAL--QnhinlLKkdyiddEVYpklak 1041
WP_014856656   82 --EEA---------FRKTV----E--------------INp-----EFS----LGY--Ng----LG------GTY----- 106 
WP_014856718  156 --IKI---------YKKLI----Ssig-----------------------pewHIL-VR-----LT------ELN----- 180 
WP_081719633   46 ---------saessFKSLL----K--------------DYp-----ESG----FIL-LN-----LG------NIY----- 72  
WP_045475624  269 --EKM---------FLKKI----Av------------sSDkp--edIVI----NRF-VL-----LG------EFY----- 298 
WP_014147904  252 --EHI---------LTELV----D--------------QRp-----NDI----QQKlIL-----LG------FIY----- 277 
WP_062477752   59 --ETQ---------LLNLT----T--------------DFp-----HRL----DYV-QQ-----LA------DLY----- 83  
WP_124878675   10 ----------------QEL----Kt-------------LEktavlqQNAdaqlEVLn-N-----KA------FYY----- 39  
WP_041263810  119 --EKVDSIQQAFDFYKTALly---aPTT--P-KTekntiltrliflSDnikkydkealkyanqylkneqidnipapVALS 190 
WP_012505467  949 --QQQKKWKEAEDIL---Le-----SLY--I-DA------------EQl--------------------------hPRTE 977 
WP_014487113 1042 ylLDKDDFYGSRILFENLL------Ta--yP-NN------------LE----------------------------SIVG 1072
WP_014856656  107 --FIEGKYQESVEAFKKFAelttkkSLKekAnDNi-----------AR----------------------------AYVK 145 
WP_014856718  181 --ERIGNQKETIETLEELS------RLN--P-SN------------LD----------------------------LQKL 209 
WP_081719633   73 --YSQGSLNKSIEYYLKAL------EKE--Pdw-----------------------------------------gvAYYK 101 
WP_045475624  299 --INHGQWQRAEKMFLKGLei--nqTLE----NSag---------iVY----------------------------HYAQ 333 
WP_014147904  278 ----QTDRNRTDEVLQ-SFi-----KSS--Q-EN------------PKhl----------------------------lE 304 
WP_062477752   84 --AHQRETDKGVHQYQRFL------RHN--P-DN------------AN----------------------------AHFN 112 
WP_124878675   40 --FTKAEYNKAYKIAKELE------EKAi-AaNN--------------------------------------------IR 66  
WP_041263810  191 LANIF-YQ---NTEY---EKA----QKLTK-Silektnsna--------------ypiqkaafiYT------NCAF---- 234 
WP_012505467  978 LSKIY-QQ---QKKW---KKA----EDILL-Eeikiapd------------------alhprteLS------KIYQ---- 1017
WP_014487113 1073 YADy-eAR---LKHY---DRA----MEILNtAalplyesnpf------------yrgkefvynmLG------QIYY---- 1119
WP_014856656  146 LAEe-sKK---DGNY---QKA----IEQLQ-Eaikysef-------------------daayvlLA------NTYY---- 184 
WP_014856718  210 LIDAY-TK---AEQY---DRA----FQLCD-Ellls------------------------ypydLGllqqkgNIYI---- 249 
WP_081719633  102 LGVTY-FR---AGKL---IKA----LESFN-Kvielknq------------------shamasyFV------GLINfflg 145 
WP_045475624  334 LAQFY-LK---SGHE---QQA----EKMLL-Kaiaidksskn------------qenvaihsaqLG------EIYV---- 379 
WP_014147904  305 LAKWT-LM---VNNV---SAA----KQQLK-Diadnkkfka--------------dvrteadllLA------NIYF---- 348 
WP_062477752  113 LALLY-KK---QMQF---DKA----EAAYQ-Kalalnieq-----------------peevhtnLA------VMYS---- 153 
WP_124878675   67 LIAISkNRlgvTLNFlqvHDEsekkLKEAE-QfiddnefpdknlirannyqfqsdlythilkhdVA------VIYVkkti 139 
WP_041263810  235 ------------R-L---Q-----------DLDGMktyyarikdeklklelentaplyyynlgyvyffmydfdksLRYLK 287 
WP_012505467 1018 ------------Q-Q---K-----------KWKEA----------------------------------------EDILL 1030
WP_014487113 1120 ------------Nl----G-----------EYGNA----------------------------------------VKNFT 1132
WP_014856656  185 ------------E-N---G-----------DYEEA----------------------------------------IKAAD 197 
WP_014856718  250 ------------K-Q---N-----------NWKEA----------------------------------------ARVYE 262 
WP_081719633  146 r----------------------------------------------------------------------dddsDQAFS 155 
WP_045475624  380 ------------R-R---G-----------DNQKA----------------------------------------EKILL 392 
WP_014147904  349 ------------E-Q---G-----------DYKAT----------------------------------------SEAVQ 361 
WP_062477752  154 ------------E-R---R-----------REHEA----------------------------------------EASLR 166 
WP_124878675  140 peyekiknleerKnQlakGngniglkflsvDLDSA----------------------------------------AHYFK 179 
WP_041263810  288 TALTI---KP----D---Y---SP--AQI-F-INQV-EG-RKDDKSD---VINFLRRK---VEy-sK----Eknaayyad 337 
WP_012505467 1031 ESLYI---DA----E---Q---LH--PRT-E-LSKI-YQ-QQKKWKE---AEDILLEA---LAi-dS----Edlks-lte 1079
WP_014487113 1133 EALAInsvYP----D-----------ANY-N-LANV-YFyREKDYEK---AKQHYQTAydnLA---PnlrsDkll---yn 1185
WP_014856656  198 KVISM---NS----K-------LKgaAYYyKgLALK----QKQDTEK---AKEYFE-----LAkkdP----Qyk-----k 242 
WP_014856718  263 EIF-----DR----N---NlglTE---KL-Q-LATLfYAaAEKDSNNiyiARKFLQKIdsd--------tsDwqv--nay 315 
WP_081719633  156 AFHEI---AP----E---S---MI--ANF-F-LAQI-KI-KENHFNE---AIKLLNEL---LEe-tPl---Lseg--hym 204 
WP_045475624  393 TALKI---NEni-eNkagM---AS--NYT-K-LGTL-YA-SLGDKQR---AEEMLLKG---LEldetlenkanmaynytq 453 
WP_014147904  362 AILNK---NQ----N---Q---IG--AKI-L-KAKV-WV-QEGQLEE---ASALLNTV---LWd-mP----Nsdea-ivl 410 
WP_062477752  167 QALKI---NP----D---Y---VP--ALF-N-LATL-FE-EFGIKEQ---ATGLYQQI---LQh-qP----Dnvev-mar 215 
WP_124878675  180 KSLAIq--DKieakNi--N---VA--NYTg--LGEV-YN-RKKDHQK---AVMYLKKA---EElnekvqdgfymtsiyel 240 
WP_041263810  338 LTRLyvHEkryNE-AIKVADSclRLepnrhdvyflealS 375 
WP_012505467 1080 LYIVyrNTgrsEH-GETLLLKclSInpydlnsllemgkl 1117
WP_014487113 1186 LSWIyySdgeyDR-AFEGFnalfqknpsnsvvsyalgns 1223
WP_014856656  243 LAEy--eL--------KYMr------------------- 252 
WP_014856718  316 LGEIelKLg-nDSvAIEYFRKaaKLaew-------naqV 346 
WP_081719633  205 LGQAyyGLhrnTD-AIKAFRKvlEInpddqraktkltlm 242 
WP_045475624  454 lgllyakqqpdlaqakemflkgleldlnnalenseetvt 492 
WP_014147904  411 LGDIflQQgelDK-AQKNFKEalDInpanlqalfpvvek 448 
WP_062477752  216 LVQSeiITpekKG-VLENLESvlKHnpaltqlhkeagyf 253 
WP_124878675  241 LQDSynNLgneKE-YEKyklrylenlkieneeklsgvkt 278 
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