1XW8


Conserved Protein Domain Family
LamB_YcsF_YbgL_like
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cd10800: LamB_YcsF_YbgL_like 
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Escherichia coli putative lactam utilization protein YbgL and similar proteins
This subfamily of the LamB/YbgL family is represented by the Escherichia coli putative lactam utilization protein YbgL. Although their molecular function of member of this subfamily is unknown, they show high sequence similarity to the Aspergillus nidulans lactam utilization protein LamB, which might be required for conversion of exogenous 2-pyrrolidinone to endogenous GABA.
Links
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Statistics
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PSSM-Id: 212111
Aligned: 9 rows
Threshold Bit Score: 369.016
Created: 24-Aug-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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putative active
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:putative active site [active site]
Evidence:
  • Comment:based on similarity to Pseudomonas Aeruginosa hypothetical protein Pa4511
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Feature 1             #                                                #          #              
1XW8_A         3 IDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQIXQACVREAIKNGVAIGAHPSFPDRENFGRSAXqLPPETVYAQT 82  Escherichia coli
Q8XXE5         4 IDLNADLGEGCDNDEALLALVSSANIACGWHAGDVNTMRQTTAWALRQGVSIGAHPSFPDRENFGRTEMhLPPDEVYAGV 83  Ralstonia solan...
Q7NT87         3 IDLNADLGEGCGDDAALLGLVSSANIACGWHAGDADTMRRTVLLALEKGVAIGAHPGFPDRENFGRSEMrLPMEAARAGL 82  Chromobacterium...
YP_002235490   4 IDLNVNLGEGRAHDDALMTYATSINIACGWHAGDPTTMHRTASAALARDIAIGANPSYPGRAHCGRPSSeMDRDDLCAGI 83  Burkholderia ce...
ZP_02888540    4 IDLNVDLGEGSGNDLAMLEYATSVNIACGWHAGDAWTMRTVVKAALERGIAVGAHPGYPDRENFGRRSMeLTYEEIYAGV 83  Burkholderia am...
YP_004447859   2 IDLNCDLGEGFPADAALMPLISSANIACGYHAGDRVTMRSTIALALEHRVAIGAHPGFDDKANFGRLPIaLSPDQIYQLV 81  Haliscomenobact...
P45347         4 IDLNADIAEGFPFDESLLQLLSSANVACGLHAGGAKEMQSAVKFAKENKVRIGAHPSFPDRENFGRTAMaLSSQELIAHL 83  Haemophilus inf...
P0A0Z2         4 VDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAALAYAQQNGVRIGAHPGYPDRENFGRTEMnLSEADLRACL 83  Neisseria menin...
AAZ18949       3 IDLNADVAEGCGQDDKLLTIVSSANVCCGLHAGSYSEMLATLQLAKENNVSVGAHPGLNDRENFGRIHQpLSEANYRALL 82  Psychrobacter a...

Feature 1                             # ##   #                                                #  
1XW8_A        83 LYQIGALATIARAQGGVXRHVKPHGXLYNQAAkEAQLADAIARAVYACDPaLILVGLAGSELIRAGKqyGLTTREEVFAD 162 Escherichia coli
Q8XXE5        84 LFQIGGLSAIVRAQGGRLAHVKPHGALYNQAArDRPLAMAIARAVRDFDAsLAVFGLAGGELVLAARelGLAAKEEVFAD 163 Ralstonia solan...
Q7NT87        83 LYQLGALDAIVRAEGGALRHVKPHGALYNQAArEPELAAVLARAIRDFNPaLRAVGLAGGCFIDACRaeGLEVWQEGFAD 162 Chromobacterium...
YP_002235490  84 QYQIGALGGIVKALGGRLAHVKPHGALYNDAEhDASIADVVVAAVRRVDPsLALYGLSGGHLVAKAReaGLVAIAETFAD 163 Burkholderia ce...
ZP_02888540   84 QYQVGALDGIVRAIGGRLVHVKPHGALYNDAErSIAVCRAIVCSVRDLDPsLVIYGLAGGQLVRVARelGMQAYDEAFAD 163 Burkholderia am...
YP_004447859  82 LEQLTLIAAIAREEGATLNHVKPHGALYNRAAqTPEWAQAIAKAVHDFDAnLILFGLSGSHSIRAAKylGLSTANEVFAD 161 Haliscomenobact...
P45347        84 RYQLGALKAICDGEGAVISYVKPHGALYNQAAkDEKIARLIAQTVYQFDPnLKLMGLAGSLMLRIAEeeKLQTISEVFAD 163 Haemophilus inf...
P0A0Z2        84 NYQLGALQALCRDQGLEMAYVKPHGAMYNQAAkNRALADTVARIVADFDPkLKLMALSGSLLLEAGKaaGLGVISEVFAD 163 Neisseria menin...
AAZ18949      83 VYQLGATKALCDLVGVPLEYVKPHGALYNQAAiDEALSDILVSEIKRFDPnLKVMGLSGGYLVKSAKkhGLEAISEVFAD 162 Psychrobacter a...

Feature 1        #       #  #                                           #                        
1XW8_A       163 RGYQADGSLVPRSqsGALIENEEQALAQTLEXVQhGRVKSItGEWATVAAQTVCLHGDGeHALAFARRLRSAFAEKGIVV 242 Escherichia coli
Q8XXE5       164 RGYNADGTLVKRGtpGALLENEEAALSQTLAMVReQRVQSVdGVWVPIRAQTVCLHGDGaHALAFARRIRDRLGSEGIAV 243 Ralstonia solan...
Q7NT87       163 RGYRADGSLVPRGlpGALLQDDSAMLAQAEDMALrQTVAAVnGLRIPARVDTLCLHGDGeHALRFARLLRERLEALGVEI 242 Chromobacterium...
YP_002235490 164 RRYRPDGTLVPCSepDAFIDDPGHIARRTKDIVVaGRLQADdGSWISITAQSLSLHGHGhHAVAFAREIHAALRSASCTL 243 Burkholderia ce...
ZP_02888540  164 RGYAADGRLLPRAepGAVIHDVDEVTRRVSDLLTtGTVRARdGNRIRLSPQTLCLHGDGeRAVIFAQTVHAAMGSMPSGQ 243 Burkholderia am...
YP_004447859 162 RSYQADGSLTPRHqgGALIQDTQLCIAQVTQMIEqGSVTTTtGQNIPLQADTICLHGDGmHAISFAQAIRHALEAKKIVI 241 Haliscomenobact...
P45347       164 RHYMPDGSLVPRSqpNAMVESDKEAIQQVLQMVTkGQVNAIdGSLVPVKAESICLHGDNqHSLQFAKRIVEELEKNHIKI 243 Haemophilus inf...
P0A0Z2       164 RRYMPDGTLVPRSrpDAQVDSDEEAIAQVLQMVRdGQVKAVdGSLVAVQADSICLHGDGpHAVVFAEKIRQELLAAGIKV 243 Neisseria menin...
AAZ18949     163 RNYEKDGSLVSRSkdNALITDTDDAIKHVLQMITeGTVTSVcGQIVPVEAQSICLHGDGeHAILFAQEIKKQLELKGIKI 242 Psychrobacter a...

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