Conserved Protein Domain Family
Ubl_midnolin

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cd01804: Ubl_midnolin 
ubiquitin-like (Ubl) domain found in midnolin and similar proteins
Midnolin, also termed midbrain nucleolar protein, is a nucleolar protein that may be involved in regulation of genes related to neurogenesis in the nucleolus. It is strongly expressed at the mesencephalon (midbrain) of the embryo in day 12.5 (E12.5) mice and its expression is developmentally regulated. Midnolin plays a role in cellular signaling of adult tissues and regulates glucokinase enzyme activity in pancreatic beta cells. It can also control development via regulation of mRNA transport in cells. Midnolin contains an N-terminal conserved ubiquitin-like (Ubl) domain with a beta-grasp Ubl fold, a common structure involved in protein-protein interactions.
Statistics
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PSSM-Id: 340502
Aligned: 14 rows
Threshold Bit Score: 98.8766
Created: 9-Jun-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
key conservedkey conserved
Feature 1: key conserved lysine K27, 1 residue position
Conserved feature residue pattern:[KR]Click to see conserved feature residue pattern help
Evidence:
  • Comment:K27 (Ub numbering) is a lysine conserved in the Ubl_ubiquitin_like family; it is one of 7 lysines involved in chain linkage in ubiquitin (K6, K11, K27, K29, K33, K48, or K63, Ub numbering); may have other functions, for example for NEDD8 it is involved in the mechanism of protein neddylation

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                   #                                           
Q504T8         31 MSLAIHSTTGTRYDLAVPpdETVEGLRKRLSQRLKvPKERLALLHKDTRLSSGKLqEFGVGDGSKLTLVP 100  human
Q7ZWX9         20 MNLNIQSTTGTRYELSVPlnETVDGLKRRISQRLKvPKERLTLLHRETRLSSGKLqDLGISDGSRLTLLP 89   African clawed frog
EMP24156       26 MNLYINTTTGTRYELSVPveETVEGLKRRLSQRLKvPKERLALLHKESRLSSGKLqDLGVVEGSKLTLVP 95   green sea turtle
XP_002611085    1 MRISIHPTTGGQFELDVPchETVEELKRRISKQLKvAKDRIMLLHRDKQLKRGSLdENAVSEGSRITLLP 70   Florida lancelet
NP_572648      69 INLNISTTTGGNFGVSVEphISVESLKKIIAKKLKvAKDRICLLHREKELQDGTLrDHNLMDGSKIILIP 138  fruit fly
XP_002734487   30 WTVQIHPSTGGQFNIEVPsnETVEGLKKRIARKLKaPKEKLMLLHRDRQLKDGTLsDNALCNGSRLVLLP 99   Saccoglossus kowalevskii
KFM58811        7 RTVYVQPTTGGRIEVSLPpdSSVSSLKLIVAKRLKiPKDKIVLLHKNKQLTEGSLiENNIIEGAKLTLLP 76   Stegodyphus mimosarum
ELU18760       44 CQVHICPSTGGGFVLRVDlsDRVDLLKAIIGQKLRiPKERTHLLFKDRILSGGTLrENGIGHDSKITLMP 113  Capitella teleta
JAN58118       80 ISLTVAPTTGGQFELKVSklETIDNLKKTISKRLKvPKERICLLWKDRHLRDGTLrEHGVCDGSRLTLLP 149  Daphnia magna
XP_013409098   28 ISIQICPSTGGQFDLQVTqeFTVDDLKRAIGKKLKvTRDKISILFREKILKDGTLrEHSVVDGSRITLLP 97   Lingula anatina

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