1DTD,1KWM,3D66,2C1C


Conserved Protein Domain Family
M14_CP_A-B_like

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cd03860: M14_CP_A-B_like 
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Peptidase M14 carboxypeptidase subfamily A/B-like
The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the pancreas. The A forms have slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA3 is found in secretory granules of mast cells and functions in inflammatory processes. CPA4 is detected in hormone-regulated tissues, and is thought to play a role in prostate cancer. CPA5 is present in discrete regions of pituitary and other tissues, and cleaves aliphatic C-terminal residues. CPA6 is highly expressed in embryonic brain and optic muscle, suggesting that it may play a specific role in cell migration and axonal guidance. CPU (also called CPB2) is produced and secreted by the liver as the inactive precursor, PCPU, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). Little is known about CPO but it has been suggested to have specificity for acidic residues.
Statistics
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PSSM-Id: 349433
Aligned: 98 rows
Threshold Bit Score: 316.391
Created: 18-Oct-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteactive site
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:[H] [ED] [HR]Click to see conserved feature residue pattern help
Evidence:
  • Comment:Metallocarboxypeptidases share the zinc binding motif HXXE...H, where the zinc ion is penta-coordinated to ND1 atoms of the histidines, OE1 and OE2 atoms of the glutamic acid, and to a water molecule in a slightly distorted tetrahedral manner.
  • Structure:1DTD: Human Carboxypeptidase A2; contact distance 3.5A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
1DTD_A      6 YHTLE-EISQEMDNLVAEHp-gLVSKVNIGSSF-ENRPMNVLKFStg--------------------------------- 49   human
ORZ38145  175 FLTFK-QVGEYLNELQTAYp-kLVSTSVIGKTY-EERDLVAVRVGrldkpa---------------------------ap 224  Catenaria anguill...
KWU41341    4 YHPYE-QIHTILSRFEDAFp-gWVEVITLGQSS-QGRDIWAVKVSkpsskaassq-------------------dvhrsg 61   Rhodotorula sp. J...
ORY87504  139 YHSLD-ALYQILRRFEEEFs-dYAHIVKVGESA-EGKDILGLKVTnqsytptvsrsqddvvdshfedsdgihalkhkkhk 215  Leucosporidiella ...
KIM33078  138 YHSAA-NITRFMRSLVHTFp-nHTSLFHVGHSS-EGRRIVGIKIVspepvp---------------------------vg 187  Serendipita vermi...
KIO20577  141 FHDWL-DIHSFMQQMAEDYp-dVVRVVRIGRTA-EGRDIVGLDIGirernkk------------------------gkpk 193  Tulasnella calosp...
CEL56271  196 GKHSAwETHPFVEVVHHYArnfISRLAELGGLIsRGHAITMRDLYsnprfda------------------------itqs 251  Rhizoctonia solan...
KNE58318  163 YLGYD-AMRTMWDAMAAQWp-gRVSAVPVGKSY-ENRTMAAVKVTsgkdap---------------------------ag 212  Allomyces macrogy...
KIJ49080   60 YHPLW-ETNGFLEHLALTYp-eNLKLEEVGKSA-GGRSILAAAISnpelkkn------------------------kkkk 112  Sphaerobolus stel...
EFJ02561  143 YHSYL-ELHDMLYALHDAYp-dVVTIVEYGRSS-EGRPLLGAVIQdeevpsdeekllsf----------shahsggrkge 209  Schizophyllum com...
Feature 1                  #  #                                                               
1DTD_A     50 -gdKPAIWLDAGIHAREWVTQATALWTANKIVSdygk------------dpsiTSILDaLDIFLLPVTNPDGYVFSQtk- 115  human
ORZ38145  225 gkkRFGVMVLGGAHAREWSSVSSTLMTIHSLVAeavsg-----------saraVAVLDaFEFHFVPMANPDGYEYSMnk- 292  Catenaria anguill...
KWU41341   62 grgKFKFLVAGTQHSREWIAASTVLYLVHELVAldheg-----------kaphRKLLEqVEFTFVPVVNPDGYVYAWeh- 129  Rhodotorula sp. J...
ORY87504  216 ihkKLGFVVAGGQHAREWIAPSVVLYLIHDLLLstvyvpypshshrtysrptaAHLLDtVEFTFIPTLNPDGYSWTWate 295  Leucosporidiella ...
KIM33078  188 kkgRKAMVILGAQHAREWIATSTALYLAHVLAVdpaeqgd-------hkrhalRRLLDhFEFHIIPLPNPDGYEYTRkh- 259  Serendipita vermi...
KIO20577  194 nwrKHRTVIQGAQHAREWIATSTALYFAHSLLVnkke------------rgsmTKLLErMDFTIIPVPNPDGYVYTWeh- 260  Tulasnella calosp...
CEL56271  252 rpiKDRVVIQGAQHAREWIASATALYVAHALVTpede------------pgslQHLLDkFDFTIIPVPNPDGYAYTWst- 318  Rhizoctonia solan...
KNE58318  213 kdgKKTVVVVSGLHAREWIAPAATINIMSNLAStygt------------vprvTALLDaFDFYFVPVVNVDGYEYSMtk- 279  Allomyces macrogy...
KIJ49080  113 lkqKPRFVMIGAQHAREWIATSTALYLTHALLVdeke------------pwslRELLDdFDFFIIPSPNPDGYEYTWtt- 179  Sphaerobolus stel...
EFJ02561  210 adtKLAFVISGAQHSREWIATSTASYLAHALSSntse------------pgslRSLLKhFDFHIIPTPNPDGYVYTWeh- 276  Schizophyllum com...
Feature 1                                                                                     
1DTD_A    116 -nRMWRKTRSkvsa----gslCVGVDPNRNWDAGFggp----------------------------gaSSNPCSDSYHGP 162  human
ORZ38145  293 -dRLWRKNRQpig-----hasCLGIDINRNWPFRWssatrn----------------------nangnSTTTTSGTNAAQ 344  Catenaria anguill...
KWU41341  130 -dRLWRKSRQpvgrk-spqaqCLGIDLNRNWGYQFqp-----------------------------gaRPNPCSDSYPGA 178  Rhodotorula sp. J...
ORY87504  296 gdRLWRKNRQptg------dgCYGVDMNRNWGFKWas-----------------------------gsRPNPCSDAYAGE 340  Leucosporidiella ...
KIM33078  260 -dRLWYKNRQtvsde-dgqtvCKGIDMNRNWGYEWlpa---------------------------ndpASGPCRHWFPGS 310  Serendipita vermi...
KIO20577  261 -eRLWYKNRQdvvg---gggkCKGLDLNRNWGYEWep-----------------------------asDHKVCTEWYPGE 307  Tulasnella calosp...
CEL56271  319 -dRLWYKNRMqlqphasasneCQGIDMNRNWGYQWnasgd-----------------------glsggPQDPCSHWYPGA 374  Rhizoctonia solan...
KNE58318  280 -dRLWRKNRQpts------stCTGIDLNRNFPYKWspp----------------------------stTATPCDATYPGS 324  Allomyces macrogy...
KIJ49080  180 -dRFWYKNTMpvdg----qsdCRGIDMNRNWGFGWerq---------------------------tspKPDPCAHWYPGE 227  Sphaerobolus stel...
EFJ02561  277 -dRFWHKNRQplgl----gveCTGIDLNRNWGYKWrpvtygdvdlsssddnswqgeadlkkkhkkpkpTPNPCSASFPGS 351  Schizophyllum com...
Feature 1                                                 #                                   
1DTD_A    163 SAN--------SEVEVKSIVDFIKShg---------kVKAFIILHSYSQLLMFPYGyk-cTKLDDFDELSEVAQKAAQSL 224  human
ORZ38145  345 CDPtfpgtgpaDAKETQALMSWIQSlrss----pslqLTAMYDVHAYSQLWMYPHAfscsTNLPNGDALQRVSSKAAAAI 420  Catenaria anguill...
KWU41341  179 KAF--------ESVELQALRTYMLDg-----------VDAFLDVHSFGQMLLFPYSyscdVVTRDQENHYEAVLQAAKAL 239  Rhodotorula sp. J...
ORY87504  341 GPF--------ESPELRAVRDYLLEkk--------nnVKGFLDVHSFGQMIMFPFSyscsRSSPDEENHFEGVVWAAKAL 404  Leucosporidiella ...
KIM33078  311 RPF--------ESHEVNALASYLTHqtgg-----kghVVSFLDLRSYGQTLSAPFSyscdLYPADAEDQIEAALGAAQAS 377  Serendipita vermi...
KIO20577  308 HAF--------EALETRAISSYLKWtp---------nIRAFIDLRSYGQLIMHPFShsckAHPKDEENLIEAGLGMAKAL 370  Tulasnella calosp...
CEL56271  375 YPF--------QAPEVTAIANYISRtp---------kIRGFLDLRSYGQQLMYPYSysceHVAPHAENLIEAALGATKAL 437  Rhizoctonia solan...
KNE58318  325 KAG--------EAMEITVLTNWITTlp---------nLVAFYDLHAYSQLWMYPFGyacnAQPSDAAALAAVASTAQAAM 387  Allomyces macrogy...
KIJ49080  228 RPF--------QAPEVAALSKYFKKlk---------dVTAFIDLRSYGQTISTPYSytcdKMPPDEEDILEAAHGAAAAV 290  Sphaerobolus stel...
EFJ02561  352 RPF--------QAPEVNALANYVTAigsgvggapgreIGVYIDLRSFGQMLSTPYSfscqRMPRDNEDQLEAAMGAVKRM 423  Schizophyllum com...
Feature 1                                                                                     
1DTD_A    225 srlhgtKYKVGPicsvIYQASGGSIDWSYDyg-ikYSFAFELRDtg--ryGFLLP---ARQILPTAEETWLGLKAIMEHV 298  human
ORZ38145  421 kqvagaQFTTGQicstIYVAAGSMSDWAYEtlalpFAFAIELSPgnsdpsGFLLP---ADKIANVGREMVAGFLASVQEI 497  Catenaria anguill...
KWU41341  240 rdvhgrVFETGSvcevSLTSPGESLDWAYVvakirWSFATELRDgg--ifGFLLP---PAQIRPSGEEMSAALRRLTQFI 314  Rhodotorula sp. J...
ORY87504  405 ravhgkNFEVGSvcevSLTAPGDSIDWTYAvg-kiRWSFSVELRgg--ifGFLLP---PAQIRPSGEEMSAAFVALADYV 478  Leucosporidiella ...
KIM33078  378 srvhgiSVSTGRlcetLYSAPGNIIDWAYAvagikYSYAAHLRDtg--iyGFLLP---QEMIRPTGEEAAALVDYLATFI 452  Serendipita vermi...
KIO20577  371 tkkhgtHMIAGSlcdkLYSAGGNIIDWVYAeakvsVAYSVMLRDtg--tyGFLLP---ATMIRPVGEETADMVAYLAKWI 445  Tulasnella calosp...
CEL56271  438 rethgvPYTSGAscelLYPAPGNIIDWMYGeagvkYSYSLMLRDtg--tyGFLLP---PRYIQPVGEETAAAVKSLAKFI 512  Rhizoctonia solan...
KNE58318  388 qsa-gaPFAVGSicstIYEAAGSSVDWAYAaakipFSYAVELRPsa--naSAMGFlvpPDQIMAAAKETYAGVLASAEAI 464  Allomyces macrogy...
KIJ49080  291 rhahgtSFKVGRlcstLYQAPGNILDWMYEkkgvkYSYAVHLRDtg--tyGYLLP---SEWIRPVGEETGRLVSYLVEFI 365  Sphaerobolus stel...
EFJ02561  424 kaahgmGYKTGRlcelLYNAGGNIMDYMYKresikYSYSLHLRDtg--tyGFLIP---PEWIRPVGEETAQLVTYLAHFV 498  Schizophyllum com...

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