Conserved Protein Domain Family
bHLH-O_HES7

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cd11462: bHLH-O_HES7 
basic helix-loop-helix-orange (bHLH-O) domain found in hairy and enhancer of split 7 (HES-7) and similar proteins
HES-7, also termed Class B basic helix-loop-helix protein 37 (bHLHb37), or bHLH factor Hes7, is a bHLH-O transcriptional repressor that is expressed in an oscillatory manner and acts as a key regulator of the pace of the segmentation clock. It is regulated by the Notch and Fgf/Mapk pathways. HES-7 is one mammalian counterpart of the Hairy and Enhancer of split proteins that play a critical role in many physiological processes including cellular differentiation, cell cycle arrest, apoptosis and self-renewal ability.
Statistics
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PSSM-Id: 381468
Aligned: 11 rows
Threshold Bit Score: 87.0151
Created: 22-Oct-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative DNAputative dimer
Feature 1:putative DNA binding site [nucleic acid binding site]
Evidence:
  • Comment:The N-terminal basic region of bHLH mediates high-affinity DNA-binding to specific hexanucleotide sequences
  • Comment:Based on the structure evidence that Mus musculus NPAS3 (5SY7)-ARNT complex binds HRE DNA.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            ###  # ##   #                        ##                  
Q9BYE0        13 PKMLKPLVEKRRRDRINRSLEELRLLLLERtrdqnlRNPKLEKAEILEFAVGYLRERSRVE 73  human
NP_571153     13 KRILKPVIEKKRRDRINQRLEELRTLLLDNtldsrlQNPKLEKAEILELAVEYIRTKTATA 73  zebrafish
Q28HA8        14 RKLLKPLVERRRRERINNSLEKLRIFLSQAlkseklKNPKVEKAEILECTVQFLQSSKLVP 74  western clawed frog
XP_015278985  14 KKLLKPLMEKRRRDRMNQSLDRLRVLLFEAtqderlKNPKVEKAEILQKTVQFLKTQPLSA 74  Gekko japonicus
XP_014345072  86 LCMIKPLVEKRRRDRINESLEQLRVLLLENtqderlHNPKMEKAEILELTVKYLKNITPLN 146 coelacanth
OCT90600      13 RKILKPVVEKQRRDRINRSLGEMRILLFQLtgnqklQNPKMEKAEILELAVIYIRNVTRMK 73  African clawed frog
AAH95016      27 RRVPKPLMEKRRRDRINQSLETLRMLLLENtnneklKNPKVEKAEILESVVHFLRAEQASE 87  zebrafish
XP_020384959  15 KKLLKPLVEKRRRDRMNRSLDQLKSFLLKHyqnesfRNGKMEKAEILEMTVQYLKNAALAN 75  whale shark
XP_023659289  16 RKLLKPQVEKQRRERMNRSLEALRVLLLKDsqhqgkISRRIEKAEILEETVLFLKKSSGKG 76  Paramormyrops kingsleyae
PWA24972      14 RKLMKSQVEKRRRERMNCSLERLRTMLLQEpqp-ggTQQKVEKAEILEHTVLFLQRNAKER 73  western mosquitofish
XP_012687731  18 RKLLKPQVERRRRERINLCLDTLRKTLMQDr----eNQKRAEKTEILEHTVTFLRNSSTHD 74  Atlantic herring

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