7DVQ


Conserved Protein Domain Family
zf-SCNM1
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pfam15803: zf-SCNM1 
Zinc-finger of sodium channel modifier 1
zf-SCNM1 is a C2H2 type zinc-finger conserved in eukaryotes found at the N-terminus of SCNM1, sodium channel modifier protein 1. Phylogenetic analysis of these zinc finger sequences places SCNM1 within the U1C subfamily of RNA binding proteins that is commonly found in RNA-processing proteins, suggesting that SCNM1 is involved in splicing activities.
Links
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Statistics
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PSSM-Id: 464882
Aligned: 18 rows
Threshold Bit Score: 23.8443
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
7DVQ_v        44 CAICPHRPVLDTLAMLTAHRAGKKHLS 70 
XP_001491760  44 CAICPHRPVLDTLAMLTAHRAGKKHLS 70 
OWK51931      44 CSLCPQRPVCDTLQTLLLHRAGRKHLD 70 
XP_005996543  44 CAVCSYRPVFDTLDMLTVHRTGKKHLA 70 
OCA27339      44 CTVCHHRPVFSTIDMLSVHRSGKKHLA 70 
ESO10192      44 CTVCHQGPVFDTVPMLSIHRSGKRHKK 70 
1_pfamImport   1 CLVCTHRPIFDTTTMLAKHRQGKKHLF 27 
EDO46534      44 CLVCNHRPVFDTSAVLSIHRQGKKHLA 70 
XP_016658595  46 CMICIQRPIFDTINVLSIHRKGKKHLN 72 
2_pfamImport   1 CLVCHGRPILDNIDILIIHRKGKKHLK 27
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