1DNK,1ATN,2A40,2A41,2A3Z


Conserved Protein Domain Family
DNase1

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cd10282: DNase1 
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Deoxyribonuclease 1
Deoxyribonuclease 1 (DNase1, EC 3.1.21.1), also known as DNase I, is a Ca2+, Mg2+/Mn2+-dependent secretory endonuclease, first isolated from bovine pancreas extracts. It cleaves DNA preferentially at phosphodiester linkages next to a pyrimidine nucleotide, producing 5'-phosphate terminated polynucleotides with a free hydroxyl group on position 3'. It generally produces tetranucleotides. DNase1 substrates include single-stranded DNA, double-stranded DNA, and chromatin. This enzyme may be responsible for apoptotic DNA fragmentation. Other deoxyribonucleases in this subfamily include human DNL1L (human DNase I lysosomal-like, also known as DNASE1L1, Xib, and DNase X ), human DNASE1L2 (also known as DNAS1L2), and DNASE1L3 (also known as DNAS1L3, nhDNase, LS-DNase, DNase Y, and DNase gamma) . DNASE1L3 is implicated in apoptotic DNA fragmentation. DNase I is also a cytoskeletal protein which binds actin. A recombinant form of human DNase1 is used as a mucoactive therapy in patients with cystic fibrosis; it hydrolyzes the extracellular DNA in sputum and reduces its viscosity. Mutations in the gene encoding DNase1 have been associated with Systemic Lupus Erythematosus, a multifactorial autoimmune disease. This subfamily belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds.
Statistics
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PSSM-Id: 197337
Aligned: 38 rows
Threshold Bit Score: 304.161
Created: 18-Jan-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:putative catalytic site [active site]
Evidence:
  • Comment:based on other EEP superfamily members with structure, and on site-directed mutagenesis of bovine pancreatic deoxyribonuclease I (DNase I); highly conserved in the EEP superfamily
  • Citation:PMID 9000637

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #                               #                                         #
1DNK_A         2 KIAAFNIRTFGETKMSnatLASYIVRIVRRYdIVLIQEVRDShlVAVGKLLDYLNqdd---pntYHYVVSEPLGRnSYKE 78  cattle
XP_002124912  20 LIGAFNVQIFGQSKMDkpdVVATLVKIVQRYdVIMIQEIRDSagTALPELVTEVNgvs---svpYSYVVSPRTGRtSSKE 96  Ciona intestinalis
EFC49639      46 TYCSFNVQVFGQKKMQnnqVVDVLLKILSQCdLTLIMEIRDAsgEAIKELLQLLNesknsagrkFQISLSLRLGRtSSKE 125 Naegleria gruberi
XP_002125127  21 LISAFNIKVFGQSKISkpeVVDVIIKVLSRYdLVIVQEIRDIqeTSFPTLVEQLNegg----inYTWFTGPRVGRtSSKE 96  Ciona intestinalis
EFC46274      50 KIASFNIQIFGSSKMEkknVLAVILKILSRYdLVLIQEVRDSsdTAFANLVKELSnynk--nvkYGSAISERLGRsNSKE 127 Naegleria gruberi
YP_306444     22 RIGAFNIQVFGVKKASnpkIMNTLAKVLRTYdIVAVQEIRDSsqTALPALIKVVNser----anYSYVVSERLGRtSSKE 97  Methanosarcina ...
XP_002737115  22 YISAWNIQVFGKSKMSdpeVVQVIVDVIERYdICAVQEVRDIdeIAVYDLLDELNaqn---ngaFSLELGPRVGRtSSKE 98  Saccoglossus ko...
ZP_01854606   78 RIATFNIQVFGHSKMQkpeVPQILARIIQQFdVVAVQEIRALdqSFLDEFLKILNage----qqYGCLVGPRQGRtASKE 153 Planctomyces ma...
ZP_01089208   63 RIASFNIQVFGQSKMNkpeVMQVLTEIVRKFdVVAIQELRSSeqDVIPRFLQMINstg----rnYDSIVGPRLGRsSSKE 138 Blastopirellula...
YP_003370940  55 RVATFNIQVFGEDKMAdpaAMGVIVEILRQFdVIAIQEIRAVrqDLMPRLVELINagg---khqYDYCIGPRLGNsVSKE 131 Pirellula stale...
Feature 1                                                                          #             
1DNK_A        79 RYLFLFRpn-kVSVLDTYQYDDgcescgnDSFSREPAVVKFsshs----------tkvkEFAIVALHSAPSDAVAEINSL 147 cattle
XP_002124912  97 QYGYIYRad-kVTVMSEYQYPDn-----sDVFEREPYSVKFgrsss---------gkqqTFSYISIHAKPDDAVAEIDAL 161 Ciona intestinalis
EFC49639     126 QYGYIYDsd-kVHINSTYQYPEd-----fDQFERPPYSVLVlpsnstrsislpnvasknALFVSGIHTSPKAAVQEIDAL 199 Naegleria gruberi
XP_002125127  97 QYGFVYRpd-kLELLGKFQYNDt-----dDVFEREPIITRFrwlg----------gggrEFTLIPMHAKPTDAVAEMNGL 160 Ciona intestinalis
EFC46274     128 QYGFIYNtd-kVKMIKTVQFKDt-----kGWFERPPFAFVFelnaa--------klkgqQFAILGCHIKPGDVVNELNHL 193 Naegleria gruberi
YP_306444     98 QYAYIYDsdrvKLEGEPYTYSKpe---gtDPFHRQPYIATFedrn-----------etlNLVLITVHTDPDEATEEINSL 163 Methanosarcina ...
XP_002737115  99 QYAFYYRhd-vVSVVRSYTYDDsk----hDYFEREPHMVDFstsh----------saltRFVFGAIHVKPDDAVAEIDYL 163 Saccoglossus ko...
ZP_01854606  154 QYAYFYNta-rITVNEKWTYTVid---kyDKLHRPPYVAHFrtlsps-------ssnpfTFSLINIHTDPDETDQELNVL 222 Planctomyces ma...
ZP_01089208  139 QYVFLYDkn-rIAVEPDSVFTInd---psDLLHREPLVASFhaigad------rsrvpfRFTLINIHTDPDETDEELDAL 208 Blastopirellula...
YP_003370940 132 QYAFVFDrt-sIEVDRNQLYTVdd---pdNLLHREPLVGWFrcraae-------pdkafTFSLVNVHTDPDIVDYELDWL 200 Pirellula stale...
Feature 1                                # #                                         #           
1DNK_A       148 YDVYLDVQQKWh----lNDVMLMGDFNaDCSYVTSSqwssIRLRtsstFQWLIPDsaDTTATsTNCAYDRIVVagsll-- 221 cattle
XP_002124912 162 DDVYDVVAKQYg-----EDALIAGDFNaDCSYVCSScwqtIDMWtdprFTWLIGSdvDTTVSsTDCAYDRIVVagka--- 233 Ciona intestinalis
EFC49639     200 YDVYEYYYRKNriinsnIPWLLSGDFNaGCSYVKESdwkgIRLRtdstFKWLIKDdqGTMVK-TKCPYDRFVIags---- 274 Naegleria gruberi
XP_002125127 161 LQVYMDAVGVYg-----NNTIILGDLNaDCSYVCQScwdsVVLRtdptFHWLIGDdvDTTVSnTDCAYDRIIVagsdl-- 233 Ciona intestinalis
EFC46274     194 VEVYDSFKSEPf----yKNIILTGDFNaDCSYLSDTemkkLKLStdarFKWLIDM--DSTVAdSECSYDRYIVpvelsak 267 Naegleria gruberi
YP_306444    164 STVLDSTRQTCpv---eDNFVIMGDLNaDGSYFDENka-nSLSCg--eYCWLIDNsmDTTTGdTNCTYDRIIItedm--- 234 Methanosarcina ...
XP_002737115 164 TLVNDDAVDVYn----nVNVLIGGDYNaDCDYVREDdwqyISYRtqsrFSWLIGDdaDTNLAsSSCAYDRLVThgagf-- 237 Saccoglossus ko...
ZP_01854606  223 DDVYRVVANDGsq---eDDVILLGDLNvDDQHLGELg---QVSD----IMWTVSKt-PTNTR-KSKQYDNILFsrrr--- 287 Planctomyces ma...
ZP_01089208  209 GEVYQLVRYSGp----eDDVILLGDLNvSYKKLGALg---KVPG----ITWTVSDe-ATNTL-RKSSYDNLVFiaad--- 272 Blastopirellula...
YP_003370940 201 DDVFFAVRDDQrr---eDDVIMLGDFNvNDKNLRQLg--sVPSL----VKVVAGV--PTNTR-GNAQYDNILFagts--- 265 Pirellula stale...
Feature 1                                            ##       
1DNK_A       222 ----qssvvPGSAAPFDFQAAYGLSnem---alaISDHYPVEVTL 259 cattle
XP_002124912 234 -----mtenSGMGSVFRFDLAYNLSyee---tkdVSDHYPVEFYL 270 Ciona intestinalis
EFC49639     275 -------idYEKVQVVNFKEEYGLTqal---aeaVSDHFPIRMTI 309 Naegleria gruberi
XP_002125127 234 ----idlacDGDTYRFDVALNLTQDqa-----ldVSDHYPVEFRL 269 Ciona intestinalis
EFC46274     268 klssgalyeLGQATVYRYDKDMKITdeel--vedVSDHYPIEMTI 310 Naegleria gruberi
YP_306444    235 -----esyfTGNSGLFRYDLKYNLTsee---tnaVSDHYPVYAEF 271 Methanosarcina barkeri str. Fusaro
XP_002737115 238 ----tdafrPGSAKVFYYDIDLYGTpmdptlaldVSDHYPVEMII 278 Saccoglossus kowalevskii
ZP_01854606  288 -----sqefTGKSGVYDFRTRFKLSeke---altVSDHLPIWAEF 324 Planctomyces maris DSM 8797
ZP_01089208  273 -----trefTGVAEVYDTEKEFRLTrdq---amdVSDHLPVWGEF 309 Blastopirellula marina DSM 3645
YP_003370940 266 -----ttefTGRGGVYDFMREFNLTqeq---alqVSDHLPVWAEF 302 Pirellula staleyi DSM 6068

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