Conserved Protein Domain Family
RNA_pol_Rpc4

?
pfam05132: RNA_pol_Rpc4 
RNA polymerase III RPC4
Specific subunit for Pol III, the tRNA specific polymerase.
Statistics
?
PSSM-Id: 461558
Aligned: 163 rows
Threshold Bit Score: 69.3317
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
CAZ80919                      420 ENQIFFFQFPT----MLPQlvaplskekksheasiaptdpkpsstekhrmgsstlphldinPQARTTVLPQPSGPPPSSA 495
EEH59882                       98 NGRYLVLQLPH----DLDH----------------------------------------------SVEFLTMRSPGEAVI 127
WGS:AAGF:cds.TTHERM_00142390A 235 SKKFNMLQFPSqfvyKLPQnakt-----------------------------------klkLKKLDVEKLHELKEILSFN 279
XP_679487                     194 ERFFFSIQLPN----MLPEvikdk---------------------------------rrsnSSIPNYNRIKGKTYNDIEK 236
Q8IKK2                        198 EPFFFSIQLPN----MLPAll---------------------------------------sKEEEEQNGEQTKNDTKQND 234 Plasmodium falciparum 3D7...
XP_002260232                  198 EPFFFSMQLPN----MLPAllrne---------------------------------eqneNKDDITNKRDRQPAGCKTE 240
GAB00060                      403 DHDFFVMQFPR----FFPAfrppd---------------------------------septIDRLDHDQAETKQTIETKQ 445
EFA79884                      361 DDHLFFIQLPT----SLPSsatrpvmisplmplp-------------pgakpppgmplppgAKPPAATGGTAPPAAATNA 423
Q8T1V7                        262 KDKLFFIQLPN----LLPStqskpnfnipnpvlp-------------ppkpttitktvtnpDGSITTTTIPINENTKIED 324 Dictyostelium discoideum...
EGC35465                      237 KDKLFFIQLPN----SLPStktkpnfnipfpppgl----------lkppagqpqsqqppsqPINVDNNNNNNNNNNNNAN 302
CAZ80919                      496 PTETRMPPPPSMP---KQSLKaqqalleAFPPpGIAGKLRVHKSGRMTILWGNpvdgepFAMDVSRGTDCLFLQEAVAV- 571
EEH59882                      128 SQGKADANLVTDSsiqDQLFEptshklsSEAD-RQVGELTLQNDGTVEVRFTD------AEFDVLHGSSYAHSEQFTCI- 199
WGS:AAGF:cds.TTHERM_00142390A 280 AQKPYDSAGNSIKynyNTIDYfaqkdpkKEQG-FNMGKLRIYSDGSVQFICGQ------NIFDVTEGVQNNCKQQFVAI- 351
XP_679487                     237 KKYINEIKNEENIvenQNKKNyelsninTLPN-GKFGKLIIYKNKKIKMKING------ILFDINEGSQCTFSQEIGCYi 309
Q8IKK2                        235 QTEKNEKKKKSIInksSTNDSyqlsnihTIPN-GKFAKLIIYKNKKIKMKIND------ILFDINEGSACTFSQEIGCFi 307 Plasmodium falciparum 3D7...
XP_002260232                  241 EKEQMEKKKEKKLiqkTNNSAyelsnvsTLPN-GKFAKLIIYKNKKIKMKIND------ILFDVDEGSECTFSQEIACYi 313
GAB00060                      446 NIRAPPYKAGHWQgwgKSGGMlgrqileNLPE-GKIGTFNFHASGRISMNIGE------IRYDVTSGADAGFLQEIAAV- 517
EFA79884                      424 ANNNNPTELNKTSfvpMIYPGdfsntmkSLPS-GKLGTLKIYKSGKTILTIGS------VEYHVSAGNKLKFLEEIKCI- 495
Q8T1V7                        325 QPPPPPKELDEKAfvpVIYPGdfppsikEMPS-GKLGTLKIYKSGKSILKIGT------VEYDISSGDKLKFLEEVQCF- 396 Dictyostelium discoideum...
EGC35465                      303 GENAAPPTLDEKTfipMVYPGdfpntlkELPS-GQLGTLKIYKSGKTILKIGP------VEYDISAGDKIKFLEEVNCF- 374
CAZ80919                      572 KEvSpwgEEDldekg-----arkgA-AFSLGQVKGRYVVSPDF 608
EEH59882                      200 DS-L---ES---------------T-CTFLGQVRGRLVCVPCL 222
WGS:AAGF:cds.TTHERM_00142390A 352 DQ-AkhlFENp-------------T-IFNVDNINKKFVIQPNI 379
XP_679487                     310 KE-----NS---------------E-FIFLGNCENKLIATPNI 331
Q8IKK2                        308 KE-----NS---------------E-FIFLGNCDYKLVATPNI 329 Plasmodium falciparum 3D7
XP_002260232                  314 KE-----NS---------------E-FIFLGNCDNKLVATPNI 335
GAB00060                      518 DA-E---PDVgdhrirgtlrgdgqPgLYVLAQTSTKLIARPNI 556
EFA79884                      496 -------TPDg-------------PtCYTLGTPSQHLVASPMI 518
Q8T1V7                        397 -------QTKggp--------dnsPtCYTLGIPSQHLVAAPII 424 Dictyostelium discoideum
EGC35465                      375 -------SKDg-------------PtCYTLGTPAQHLVAAPII 397
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap