Conserved Protein Domain Family
SLC5sbd_CHT

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cd11474: SLC5sbd_CHT 
Na(+)- and Cl(-)-dependent choline cotransporter CHT and related proteins; solute-binding domain
Na+/choline co-transport by CHT is Cl- dependent. Human CHT (also called CHT1) is encoded by the SLC5A7 gene, and is expressed in the central nervous system. hCHT1-mediated choline uptake may be the rate-limiting step in acetylcholine synthesis, and essential for cholinergic transmission. Changes in this choline uptake in cortical neurons may contribute to Alzheimer's dementia. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.
Statistics
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PSSM-Id: 271368
Aligned: 60 rows
Threshold Bit Score: 300.21
Created: 15-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1: putative glycosylation site [posttranslational modification site], 1 residue position
Conserved feature residue pattern:NClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
EAW53893        8 LIAIIVFYLLILLVGIWAawrtk--nsgsAEERSEAIIVGGRdIGLLVGGFTMTATWVGGGYINGTAEAVYVPGYgla-w 84   human
CAF92666        8 VVAVVLFYVLILATGIWAsrkarkaerksRGDQAEVVLLGDRsISLLVGIFTMTATWVGGGFILGVAEAVYTPKMgli-w 86   spotted green...
EFV90069        3 NAAIAGTVLLLVALGLWAsr--------rVRGRSDNFAVAGRtLTVPLVVVLLMSQVIDSNATVGAADLAGGFGFwag-- 72   Dietzia cinna...
YP_001131377    3 LLGVAISIAVVVAVGFFVst--------rIKGDSSNFLVGGRmLPFWLVGGALMGAAVDTNATLGNTDLAYEFGFwag-- 72   Mycobacterium...
YP_080383      40 ISMMIFFAFTYYLGAFYAa---------kKSNSFSDMIVAKRsMPFFVGMVTMAATWVGGGYINGTAESTYSDGLiw--- 107  Bacillus lich...
ADF41891       69 LILMFIMYGVIYFIGARAaa--------sKKGKSDDMLVAGRsMPLWISMFTMTATWVGGGYIAGTAETVYSSGLtw--- 137  Bacillus mega...
CAG05146        8 VIAMITFYLLVLATGVWAsfkskkkqkkcAATEMEMALLGNRsINWVVGIFTMTATWVGGGFILGTVEMMCTPSKgltgt 87   spotted green...
AEF39526        3 LFGVTLSVLALLAAGLYAar--------rVQGQSANYLLAGRtLSIPLVAIVLASQAIDSNGTLGNTDLTADFGFwag-- 72   Mycobacterium...
EHK86484        3 ITGVAVCLVVLLGAGFYStr--------kVRGQAGNFLLAGRsLGAPVLAVLLMSQVIDSNATLGSADLAAGFGFwag-- 72   Rhodococcus p...
CAG12072        8 LLSMALFYLAVLGIGLWAsrkarreeekcTGDISEVTMVGGRnLSLFVSIFTMTATWVGGGFIVGCAEVTYNPQKglv-w 86   spotted green...
Feature 1                                                                                         
EAW53893       85 aqAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFqqIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIIDVDMHIS 164  human
CAF92666       87 alMPVQYSLSFVFGGLFFAKPMREKRYITMMDPFqiRYGNLLSGALVLPSILMDVLWVASTLLGLGATVSVILALPFGYC 166  spotted green...
EFV90069       73 aaMPLGIAASFLLMGLFVARKVRERELYSLPEYFrtTFGRAGEVLSAVLTVASFGILMAGNLVALGHMLDYFMGVPYGLA 152  Dietzia cinna...
YP_001131377   73 acLPLGLALCLLITGIFFAKPMNRMGLTSFPDYYrlRFGRSVEIGASILLAVAFCMLVAGNLVAGGLLFNYFLGMPHWLG 152  Mycobacterium...
YP_080383     108 aqAPWGYALSLIIGGIFFARKMRRHQFMTIIDPLeqRFGKRMAGVLYIPALLGELFWSAAILTALGTTFGMILNIDFQTS 187  Bacillus lich...
ADF41891      138 tqAPWCYSISLILGGIFFARKMRRFEFMTMLDPLesRFGKKMATVLYFPAILGELFWSAAILTALGTTFGVILGLSFSIS 217  Bacillus mega...
CAG05146       88 lmVVLAYSSCLILGGLVFVDPLRKKNCVTILDPVnhQYGKALAAVMSLVSFFLDVVWITTTLTALGGVTSVVLDLPFSVS 167  spotted green...
AEF39526       73 asLPIGLAACLVIAGLFFAKRMRALHVVTLPEYFekRFGRAMELPASALTVSAFGILLAGNLVAIGFLLDRFAGIPYTTS 152  Mycobacterium...
EHK86484       73 aaMPLGVASSVLLVGLFFAKRLRATGVVTLPEFFarRFGRGTEITASVLTVGSFGILLAGNLVALGYLLQYFLGLNYTAA 152  Rhodococcus p...
CAG12072       87 alVPVAFAANLILGAVFFVKPIRAKRYVTLMDPFqqKYGNTVAAALFIPCILADILWAACILGILGGTLSVVMNTSSYLS 166  spotted green...
Feature 1                                                                                         
EAW53893      165 VIISALIATLYTLVGGLYSVAYTDVVQLFCIFVGLWISVPFALSHpavad---------igftAVHAKYQKPWLGtvdss 235  human
CAF92666      167 VWISSAVAIAYTLLGGLYSVAYTDVIQLALIFFSLWLCVPFLLLSpvsvn---------laetAFNSTFQEPWLGtldld 237  spotted green...
EFV90069      153 ILVVTGAILAGTVVGGMFASVYTGLFLMGVMTVGFVGLSLWMFVGpgy-------------saPEGLGVLDLTQLtdpaa 219  Dietzia cinna...
YP_001131377  153 VVLIAAIAVAYTGTGGLIADAYTAIIQMGLILAGAIGLFFWMTTThgl-------------diADGTGPFALGQLsdpaq 219  Mycobacterium...
YP_080383     188 IILSAMIAIAYTVAGGMWAVAFTDVFQMIVILLGLFLVVPFVLSNvgaldsvwanyrhdfgssANLLPPLDGWKNpdwgn 267  Bacillus lich...
ADF41891      218 IILSALIAIAYTVIGGLWAVAHTDILQLSIMFLGLFLVLPFAFSNtggvgavfstysegmtgsLHLFPPIKGWEDpkwgn 297  Bacillus mega...
CAG05146      168 ICISAAVAISYTLMGGLYSVAYTDVIQLILTFVSLWVCVPFIMMNphivd---------inktLKNNTIHAPWIGqpelk 238  spotted green...
AEF39526      153 ILLAVPFVLAYTIAGGMFSSTYVGVGMIILNIFGVLALMTWMTLThgf-------------saPEGMGPLALGQLtsade 219  Mycobacterium...
EHK86484      153 VLVIIPFVLAYTVAGGMFASVYTGMVQFAIMAVGIVSLLVWTAFGpgfthg-------dglgiGDLGQLTDPAQG----- 220  Rhodococcus p...
CAG12072      167 VGISAAVAIFYTLMGGLYSVAYTDVVQLIFMFFGLWFCVPFILTSpsaan---------itvaAVTHLYQEPWLGklepa 237  spotted green...
Feature 1                                                                          #              
EAW53893      236 eVYSWLDSFLLLMLGGIPWQAYFQRVLSSSsatyAQVLSFLAAFGCLVMAIPAILIGAIGASTDWNqtayglpdpkttee 315  human
CAF92666      238 dVWRWMDDFLMLGLGSVSFQCFHQRTLSASssrtAQLTCYAAAVVVVVLGIPPALVGAVAASTDWNqtlygspspaargq 317  spotted green...
EFV90069      220 gSVINWATMFALGLGNLVAIDVFQRVSSARsargARTASLIAAAGTVVLCVPLAAVAVAGAGLLGDga-----------t 288  Dietzia cinna...
YP_001131377  220 gAVINWATLIALGIGDIVAIDFMARVFSAKspeaARRACFTAAAGTAAICVPFGLVVLAAHSFLPAel------------ 287  Mycobacterium...
YP_080383     268 lFWNWWDNALLLIFGGIAWQVYFQRVLSAKsesaAMWQSIIAGVICIIAAIPCVIIGAAGNSTDWSlfgas-----apdn 342  Bacillus lich...
ADF41891      298 tYWQWWDSTFLLIFGGIPWQIYFQRVLSAKnekaAMWLSITAGIFCALAALPPTLIGMIGYSADWSsfgas-----spes 372  Bacillus mega...
CAG05146      239 rAWIMADDFLFIALGGLSYQCFHQRTLSAAstasAKITCFAAAFVLFLFGIPAILVGAAVASTDWNqtsygspspyerge 318  spotted green...
AEF39526      220 gAVLNWATIIALALGNLVAIDLMQRIFSARcprtAQRACFGGAALILALCIPFSLVALAAVSIVGPds------------ 287  Mycobacterium...
EHK86484      221 -AAVNWATIVALGLGNLVAIDLMQRVFSAKspiaAQRACFSAATGILVLCVPLSFVALAAVSIVGDsa-----------a 288  Rhodococcus p...
CAG12072      238 eAGRWVDELLLLSIGGICYQAFYQRVLSSAsdvqAKITCYVGAALCPILGLPSLIIGAAAASTDWNqtsygtptpferdq 317  spotted green...
Feature 1                                                                                         
EAW53893      316 aDMILPIVLQYLCpvyISFFGLGAVSAAVMSSADSSILSASSMFARNIYql--sFRQNASDk-EIVWVMRITVFVFGASa 392  human
CAF92666      318 hTFVLPITLQYVTpwyMSIIGIGAISAAVMSSADSALLSATSVFSSNIYkn--iLRKQASDw-EMQWVIRISVVVVGVAg 394  spotted green...
EFV90069      289 dSPILFQLLAGPVpapIAMLVISGLLAASLTTVSGVLLATSTIIVGTVL-----HTRTLRV--SVLRASQLAMIPVAAIg 361  Dietzia cinna...
YP_001131377  288 dGPVLFVLLDQYApagLTVLVLCGLMGASMSTANGAILAISNVCVRNLGgvrrvHEPGRKD--PLLRAARVAMAPMTLFs 365  Mycobacterium...
YP_080383     343 pAMILPQTLAYLTpgiIAGLGLGAIAAAVMSSMDSSILSASSMAAWNIYrp--lIKPKATQk-QLQKVVKRSIILFGAGa 419  Bacillus lich...
ADF41891      373 aSMILTYVFKYLTpdlVGAIALGGLAAAVMAAVAASLLSASGMAAWNVYrp--iVKPNATQa-QLDKVIKRSIIIIGTGa 449  Bacillus mega...
CAG05146      319 aALSLPIALQHLTpsfISIVGIGCVAAAVMSSADSALLSAASVFSNNIYkn--iLRPQASDk-EIQLVIRASVVVGGVVg 395  spotted green...
AEF39526      288 sGPVLFSLLGDYAptwLAILVLSGLVAASLTTASGVLLSTATVIVQNIL-----RLPETVRgiSPMTATRIAMLPMAALg 362  Mycobacterium...
EHK86484      289 dAPILYVLLGEYTpqwLSILVLSGLVTASLTTISGVLLSTATVLVRNVFrv--gGENAAMSs-DVMKATRLLMLPMAAFg 365  Rhodococcus p...
CAG12072      318 aGNILPIVFQHLCplyVSVVGIGALASAVMSSVDSVLLSAASQLGRNVFkn--iLYKKASEr-CTLVAIKVCILLSGLLa 394  spotted green...
Feature 1                                                                                         
EAW53893      393 taMALLTKTVYgLWYLSSDLVYIVIFPQLLCVLFVKGtn-tyGAVAGYVSGLFLRITGGEpylylqplifyp-------g 464  human
CAF92666      395 taITTYTNSTLlLWILGADISYTLIFPHLVTVLFFKVtn-gyGAFIGYVLGLVLRVLLGEntvglpvilql--------p 465  spotted green...
EFV90069      362 ilVALRVHHTGiLLTLTFDLLCASLVAPFVLSLWTRLas-trALVISTVLGLGTRLVFFVltptiygventllyipntvv 440  Dietzia cinna...
YP_001131377  366 ilFAIYVQQTGiLLTLAFDLMLACLIVPFILGLVWRRgt-ttAALAAIAVGFTVRIGLFVltptmfgventilyipndlv 444  Mycobacterium...
YP_080383     420 avIALNVKSVYtLWYLASDLVYCILFPQLTMALFYKRan-lyGSIAGFAVAVILRLGGGEpafgippll----------- 487  Bacillus lich...
ADF41891      450 tlIALNSESVYsLWYLSGDLVYCILFPQLVCALFFKGan-wyGSLAGFIVSLVLRIGGGEpllhlkall----------- 517  Bacillus mega...
CAG05146      396 tsLANLKNSIIlFWFLANEMALLIMFPQLVCVLFFSIsn-gyGAIIGIVVGLVLRFLSGDpvlglepvihf--------p 466  spotted green...
AEF39526      363 afFALRIPQTGiLLTLTFDLLLAGLVVPFILGLYWSRgg-tsAALAALISGVTVRVFFFAttptvygvdntllfipnglv 441  Mycobacterium...
EHK86484      366 alVALRVPQTGiLLTLTFDLLLASLVVPFILGLFWSRgd-grAVAAAAIAGITVRAGFFVltptiygvdntllyipnslv 444  Rhodococcus p...
CAG12072      395 taLAMTTDAVHlLWIFSSDVLYSMMTPQVICIFYLPQsvntfGAISGFILALLLRALVGEpmiklpevlplp-------w 467  spotted green...
Feature 1                                        
EAW53893      465 yypddngiynQKFPFKTLAMVTSFLTNICIS 495  human
CAF92666      466 gctledgvyvQKAPVRTFSMLSTFLSILFFS 496  spotted green pufferfish
EFV90069      441 tasvdgwttfLAAAVSLVVYVGVAAADVRSR 471  Dietzia cinnamea P4
YP_001131377  445 sasfdgwptfIAFAAGLATYVAVALATKPAH 475  Mycobacterium gilvum PYR-GCK
YP_080383     488 -pypmiedgtVLFPFRTLAAVTAFMTIFAVS 517  Bacillus licheniformis ATCC 14580
ADF41891      518 -pypmiedgvVMFPFRTFAMVGGLLTIFIVS 547  Bacillus megaterium DSM319
CAG05146      467 gctlengvyvQYAPVKTISVLSVFAATLLFS 497  spotted green pufferfish
AEF39526      442 pesmdgwstfLAAIVSLTAYVAVALTSRSVT 472  Mycobacterium sp. DQS39A1
EHK86484      445 tssvdgwttfIGFLVSLVAYVTVALVRSPVP 475  Rhodococcus pyridinivorans AK37
CAG12072      468 drmqedgqrqRLFPFRTAIVLVTMAVMVLAS 498  spotted green pufferfish

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