7MQ8,5WLC,5OQL


Conserved Protein Domain Family
Utp11

?
pfam03998: Utp11 
Utp11 protein
This protein is found to be part of a large ribonucleoprotein complex containing the U3 snoRNA. Depletion of the Utp proteins impedes production of the 18S rRNA, indicating that they are part of the active pre-rRNA processing complex. This large RNP complex has been termed the small subunit (SSU) processome.
Statistics
?
PSSM-Id: 461122
Aligned: 164 rows
Threshold Bit Score: 114.64
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
7MQ8_SY       13 QREHRERSQPGFRKHL--GLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMT-RVKL-QDGVHIik----- 83 
EFC45750      13 RKTKKERSQPKWRRDLgyGTLEKHKDYKVRSRKAHQIEEQKKLLHEQIKNKNEDEYFIDMAhATKT-DTGTTViekiptm 91 
XP_004035419  12 GRKHRERGQLKEREHL--GLLEKKQDYKKRAKHYHKINDILNNLKQKARLKNDDEFYFKMQ-RAKI-IDGKHVeqnqede 87 
XP_001021316  12 GRKHRERGQLKNREHL--GILEKKKDYIQRAKHYHKINDQLNNLKLKARLKNENEFYHKMT-KAKI-VDGKHVefeeeed 87 
CDS43510      14 ARLHKERSQPAARAKF--GPLPKKKDFILRSRDEEAKRNRIRELKRKALTKNEDEFYFSMH-NTAHsEEKGHIplnn--- 87 
XP_003376652  12 SRVHRERSQLSSRRRL--GELEKKKDYIKRARSHQIKENAIRKLRRKALEKNPDEFYFHMI-NSKV-EDGVHYek----- 82 
EFA76319      12 NREKRERPQPRSVTN---GFLERKKDYKLRADDFNKKRDQLKKLKLKAALKNPEEFRFNMI-NSKV-IKGVH-------- 78 
Q55C50        12 QRAKQERPQPESSKKK--GFLERKKDYVERAKDYNNKRDTLKKLKLQAAFKNPDEFNYKMI-SSKL-VDGVH-------- 79  Dictyostelium d...
EGC38956      12 NKAKSERPQPENTLKK--GFLERKKDYIERARDYSKKKETIKKLKLQAAFKNPEEFSYKMI-SSKL-VDGVH-------- 79 
XP_001609091  11 RRVHLERSQPRHRRDQvgQYLEKKRDYKKRAERYHLVERKIKDLAAKSRFRNEDEFNFKMI-HGKLgDDGIVVlpssssv 89 
7MQ8_SY       84 eTKEE---------VTPEQLKLMRTQ-DVKYIEMKRVAEAKKIERLKSELHLLDF--QGKQqn---kHVFFFDTKKE-VE 147
EFC45750      92 kKKKEalnnlkktkKEQRLFVQQNAEkNLNLLRMKLQIINNNIEKLRRGLGFLEVasKSDKki---kHKVFLKSKEE-LE 167
XP_004035419  88 nEDFDk----------NEFKSLVKAK-NMNLIKVQKHKDMKQIQKLQAQLHNLEGpkMNQ-------QKYFVDSKEE-FD 148
XP_001021316  88 dFD------------PKEYRRLLKNQ-NINLIKIQKHKDMKQIEKLKSQLHDLDAprQNT-------NIIFVDDKEE-YE 146
CDS43510      88 -----------tkeYSDSELVDMLSC-DILYLRREFTIEMSKIRELESRFNLLPAdpSVASrrlkpkRTVFVESIEEaRA 155
XP_003376652  83 aIGKDe--------nSKEQEKLLQTQ-NLNYINFKLQIQRQKIKKLLDDFGFLFSlckvn---svkkHS----KSEE-NE 145
EFA76319      79 -HTISks------eLDQSDLADIKQQ-DQLYLQSKRISEEKKIARLQSTLQYIDAgvAPSD------QVIFLDNENE-VK 143
Q55C50        80 -SEISkt------sLKKEQIIDIKTQ-DILYLQSKRRADDKKIERLQATLQYMDSglEPTE------QIIYVDDEKE-VK 144 Dictyostelium d...
EGC38956      80 -SEISkt------sLKKEQIIDIKTQ-DILYLQSKRKSEDNKIERLQANLQYLDSiePNE-------QVIYLDNEKD-VK 143
XP_001609091  90 aSRKLppk----kqFRRSLEQLDRSR---FVLQHRTNLKEKRAKKAITENATILMgdNS--------HIEFADSDDS-VS 153
7MQ8_SY      148 QFDVATHLQTAPELVD------------------RVFNRPRietlqkekvkgvtn-----qtglkriakerqkQYNCLTQ 204
EFC45750     168 TFDPVEYFDTDPLLLN------------------QTHNRVKrktlaeqsvqayapnagidayttpatdnatlaEYKKLEK 229
XP_004035419 149 NFQIEKDNQILNQPENlvfifkk-----ifiqlfIFQQRNRrnh--------------------------ykeKLKNLIK 197
XP_001021316 147 NFDLVEHYNTTEEMIQnksni--------ltkqqIEQQKEQleqlnskq-----------------inqkvkeSYMKLKK 201
CDS43510     156 VRSSFDPSAVSIQIPGsvpas---------dadaLMDLQAA--------------------------------GYKELSK 194
XP_003376652 146 KAKSSKKFDL--ELLKkkfpsglnfkklqselqsLDKSKLS--------------------------------SFQELLK 191
EFA76319     144 NFNAVEYFETIPEAFSnns------------stiPKLSKLKegslvlnprtap---------saaeieamtttSYKELEA 202
Q55C50       145 NFSATKYFDTVPDAFNgsl------------stiPKISKLKegslvvnpktap---------tlgqleamtatSYKELKE 203 Dictyostelium d...
EGC38956     144 NFSATKYFDTVPEAFDgsl------------stiPKLSKLKegslivnkktap---------algelesmtttAYKELNE 202
XP_001609091 154 EVEPVHESDTDSNDEMpi---------------sGDSSSMKkqpads--------------------haviqgNLQVLTE 198
7MQ8_SY      205 RIEREKKLFVIAQKIQT--------RKDL-Mdk-----tQKVKVKK-ETVNSPA----IYKFQSRRKR 253
EFC45750     230 LISKREVIEKTINDIEV--------ALQLtLssdkvekiERDKSTErKNLKGdysdvktvQFKKERKR 289
XP_004035419 198 NLKKYKRIMKKWKKHILnwiikkicQQYL-SiylkyknqQKKEKRRiRKYKNGE----VAKFFRERKR 260
XP_001021316 202 VEENHKKMERAYQKLEF--------EKNLlG----------KEKRRiKKYKTGK----VAKFFSERKK 247
CDS43510     195 RLIRAEKLKLAIAKREA--------KATL-Mrs----anVKYKVIRkGNSNHAP----VYKFE-QRRY 244
XP_003376652 192 RLRVEKELSIVAEKLHM--------KKEFaKsks--kgiIPRKKRK-GTAIRAP----VYKWQFERKR 244
EFA76319     203 RKIRHAELYKAERQLEH--------QKQSiKnkg--ekpIKVKVGGkKE-----------TWKLKRKK 249
Q55C50       204 RKLRRDQLFKAEMDL----------SKSK-IqlkrgtksGVTKKVGkKEV----------VFKQVRSK 250 Dictyostelium discoideum
EGC38956     203 RKHRRDQLFKAETEL----------AKSK-IqlkrgnssGVSKKVGkKEV----------VFKQVRSK 249
XP_001609091 199 CIDAKHEDDTLRQRLDA--------ERNLrVavhk--krqiRKVKGtGVH----------MFPFVRQK 246
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap