1D7C,1D7B


Conserved Protein Domain Family
CDH_like_cytochrome

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cd09630: CDH_like_cytochrome 
Click on image for an interactive view with Cn3D
Heme-binding cytochrome domain of fungal cellobiose dehydrogenases
Cellobiose dehydrogenase (CellobioseDH or CDH) is an extracellular fungal oxidoreductase that degrades both lignin and cellulose. Specifically, CDHs oxidize cellobiose, cellodextrins, and lactose to corresponding lactones, utilizing a variety of electron acceptors. Class-II CDHs are monomeric hemoflavoenzymes that are comprised of a b-type cytochrome domain linked to a large flavodehydrogenase domain. The cytochrome domain of CDH and related enzymes, which this model describes, folds as a beta sandwich and complexes a heme molecule. It is found at the N-terminus of this family of enzymes, and belongs to the DOMON domain superfamily, a ligand-interacting motif found in all three kingdoms of life.
Statistics
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PSSM-Id: 187688
Aligned: 95 rows
Threshold Bit Score: 65
Created: 30-Oct-2007
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
heme binding
Conserved site includes 17 residues -Click on image for an interactive view with Cn3D
Feature 1:heme binding site [chemical binding site]
Evidence:
  • Structure:1D7B_A: Phanerochaete chrysosporium Cellobiose dehydrogenase binds protoporphyrin IX containing iron, contacts at 4 A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                               # ##     #    ###     
1D7C_A      5 QFTDPt--TGFQFTGITDPv----hDVTYGFVFPPLatsgaQSTEFIGEVVAPia-sKWIGIALGGAMnnDLLLVAWANg 77  Phanerochaete chry...
1D7B_A      5 QFTDPt--TGFQFTGITDPv----hDVTYGFVFPPLatsgaQSTEFIGEVVAPia-sKWIGIALGGAMnnDLLLVAWANg 77  Phanerochaete chry...
CAE81972   16 SVHDAe--TGLTYSQNFALykvdgrGITFRIAIPSNvs-snSAYDVVVQVIIPnd-vGWAGLAWGGSMtkNPLMVFWRGs 91  Neurospora crassa
EAQ87070   32 KYCDAa--TTICYSEWLSPe-----KIAYRIAIPDTat--aGNFDVLLQIEAPrt-iGWAAIAWGGVMvnNPLTVGWANg 101 Chaetomium globosu...
EAQ90057   53 VYQDPd--TGLIFSSNFQLykadgrGITFRVAIPDTae-syTSYDSVIQMVVPnd-vGWAGLSWGGSMprSPLLVAWRGs 128 Chaetomium globosu...
EAQ90061   35 KYCPGg--TQICFSEFREPa----sGIYYRIAIPEVs---aAPFDVLLQIVAPvdkaGWAGVAWGGKMngNPLTVGWPNg 105 Chaetomium globosu...
EAQ93857   38 QYCNPe--SQICYLEYSWGp----tVPVFRIAVPDTas-snTPFDTLLQIVAPas-lGWVGFSWGGGMtlNPLAVVWPNg 109 Chaetomium globosu...
EAT92207   33 AYVDQe--TGFTFSESKAAatl-ssNIIYRIATPANvp-sgQPYDVVLQIVAPns-iGWAGLAWGGSMvrNPLTVSYPNg 107 Phaeosphaeria nodo...
EDJ96133   18 AAAAKfcdGQVCYSEFVSPq-----KIAFRVAIPDTaa-qgTNFDMLLQIVAPkt-vGWAGIAWAGRMvnNPLTIAYSDg 90  Magnaporthe grisea...
EDU50215   31 SYHDTe--TGFTFSETKAAatl-tsNIVYRIAQPANvp-anTPYDIVLQVVAPis-lGWVGLAWGGGMirNPLTVGYPNg 105 Pyrenophora tritic...
Feature 1                  # ##                                                           # # 
1D7C_A     78 -nQIVSSTRWATGYvQPTAYtgtATLTTLp---ETTINs-THWKWVFRCQGCTewnn-------gggIDVTSQGVLAWAF 145 Phanerochaete chry...
1D7B_A     78 -nQIVSSTRWATGYvQPTAYtgtATLTTLp---ETTINs-THWKWVFRCQGCTewnn-------gggIDVTSQGVLAWAF 145 Phanerochaete chry...
CAE81972   92 nnQPVLSSRSASHT-PPQLYt--TATYILfn-tGTKSNs-THWQFTALCTGCTswaadg---gavryVQPNGGNRLAFAY 163 Neurospora crassa
EAQ87070  102 -dKTVVSSRSASST-ANTTH---WTLTVL----AKGVS--SWGSTNLNPAGTVsla--------yaqSATPPAEPANNAT 162 Chaetomium globosu...
EAQ90057  129 snNVILSSRWATGHvMPTPYt-gAEYTLFk--aGTKSNs-THWQFTALCKGCTawesg----sstryLSPSGGNRLAFAY 200 Chaetomium globosu...
EAQ90061  106 -dGAVVSSRWSTQWeGGSLDp--NGVNSLawakNTRVV--SSASSNTSSFAYHdgrgvfdhdlsvakVPQGVFDAIVYAL 180 Chaetomium globosu...
EAQ93857  110 -qSATVSSRWSTGRtLPDLYp-sATYHTV----SASRNs-THWTVEAVCKGCSqws--------gggLSATGTNTFAWAV 174 Chaetomium globosu...
EAT92207  108 -qKTTASSRWATGHsTPQSYt-gATLTLLs--kGNKSNs-THWQLTAKCTGCTswigt----sgatrIDPKDQKRLGFAC 178 Phaeosphaeria nodo...
EDJ96133   91 gsSVTVSSRWASSMsPPSPYp-aASYEKLp---MSTTNa-THWRLDAICSGCSswqg-------galDPACTTAAIAWAM 158 Magnaporthe grisea...
EDU50215  106 nkASTVSSRWATGCtSYTSA---SGAVVId---PTGSRrfGFACSQSKVSNPGsa-----------tASIPVHDVYGYIT 168 Pyrenophora tritic...
Feature 1                          # ##  # #     
1D7C_A    146 S------NVAVDdpsd-pqsTFSEHTDFGFFGIDY 173 Phanerochaete chrysosporium
1D7B_A    146 SnvavddPSDPQs-------TFSEHTDFGFFGIDY 173 Phanerochaete chrysosporium
CAE81972  164 Spt---kPSNPSsp----tsAITVHDVHAYWNHDF 191 Neurospora crassa
EAQ87070  163 R------FSIHNs------rGKWTHDLKSAQIANF 185 Chaetomium globosum CBS 148.51
EAQ90057  201 S------PGKPSsvns-pssSIPIHDVHGYWSHDF 228 Chaetomium globosum CBS 148.51
EAQ90061  181 Nnpt-ppATDTAsavstavtTVAKPTTTSSRRTTP 214 Chaetomium globosum CBS 148.51
EAQ93857  175 Skt---aVAQPAns----asSFQIHNNVGMFSEGL 202 Chaetomium globosum CBS 148.51
EAT92207  179 Aaa---kPSSPGsn----tsTIPVHDVYNYFTHDF 206 Phaeosphaeria nodorum SN15
EDJ96133  159 Aha---aPAQPSsn----tsSIRYHSSRDHISFDL 186 Magnaporthe grisea 70-15
EDU50215  169 Hdf--aaGANSG--------WDALLARNGGRNMTV 193 Pyrenophora tritici-repentis Pt-1C-BFP

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