Conserved Protein Domain Family
LysM

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COG1388: LysM 
LysM repeat [Cell wall/membrane/envelope biogenesis]
Statistics
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PSSM-Id: 440998
Aligned: 971 rows
Threshold Bit Score: 43.1587
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_129188543   1 MAATLASPTLTLVRPAVVDRAAVVARPAVLGARPAVLGAPAGRAARSEPHGLLGLGGLRLTRRGRVVLVVLSLLVALPLA 80 
WP_040529333 246 YGVALPAIANKPVVELVEPGVQMDLALAANYAGLSLSELQNLNPGYNHWATAPEGANHLLLPKESVTRFNNNLAENNNQG 325
WP_083300779 299 FGVTLASVPNKPYFAAITTGRHMDVQVAAELSETPVQELLKLNPGFIRPVIAYKDDRKLVIPADKVAAFQRNLANYDKPL 378
WP_047781571 249 YGLDLPNSNLNRALTRIEVGQQIELTQAAKMADMPLQKLKTYNAGYKHNVTAPNGPHAIMLPVKNAKKLEASLTRGEMNL 328
NP_250503    266 YGISLNPINNEPYFQAVRVKRGIDLSSVAALANLDEDELYQLNPAYKRRVTMDGPQQLLVPMEKAAFLTASLDTLKPKEV 345
NP_798675    261 YGIDIPSIPNKPVLTLVDPKEQLDLAIAADYAGIGVKELQSYNPAYNQWSTAPEGPHQLLIPVEKKDAFLTQVESNRGKG 340
WP_111739633 251 YDLTMPHSNVSRALTRIEIGKQIELEQAAKMADIPLQKLKTYNAGYKHDFTAPNGPHSITLPVQNAQKLTASLQKGDVNL 330
WP_013856225 256 YGIEIPAIANKPVLTLVDPQEQLDLAIAANYAGMSVKELQSYNPAYNQWATSPTGPHQLLIPVDKVERFAQKVEENRGKG 335
WP_041755505 225 YGINLSPIANEPYFEVIALKQRMDLARVAKLADLDEDELYQLNPAFTRRITLDGPQQLLVPMEKAEMLAANLALMKPQEL 304
WP_009206052 266 AGLDLASIPNRPYFASVTTTQRIDVAVAARLAGMPLHDFVSLNPAYNRPVINFKGSRTLLLPVDKADTFSSNLENYDKPL 345
WP_129188543  81 GLGGRAVAGEPGAALE---------------------------------------------------------------- 96 
WP_040529333 326 IKVTRYKVKRGDSLGLiaqrhnttvkmiqransidgsnirvdehll-------iptsledeslytlsapqrlakltnqkh 398
WP_083300779 379 LNWQPYVTKRGESFAQlagqfgidvdelkdindigkdsiargqtilvpnvpgldvsdrqtlvalhdnraadpvdtgagda 458
WP_047781571 329 VNWGEHRVVQGETIEIlakrygisidsikqannltaqvapgqkit----------lplsgeyiaqltvqqaqiaqiassr 398
NP_250503    346 TAWQQYRVRSGDSLHSianryritvaelksanrlssnhlrkgqq-----------lsipgqiaggavkpvyqqlarqast 414
NP_798675    341 MKVARYKVKPGDSLSMlakkygttskvirranglsnnnirigqyll-------iptstkddskyaltaqnrlnktqsqar 413
WP_111739633 331 VNWGQHRVVEGETIEIlaqryginandireanaltaqvaagqvitl--------pvsaaymsqlavqqaqsvqqvaknst 402
WP_013856225 336 MKLVRYKVKSGDSLSViaqqhnttskviqtannlngnvirvgqylm-------iptsvkdekayalsasnrlaktqamar 408
WP_041755505 305 VDWQQYQVRAGDTLGTianrhhltvniirdvnrlksdslrvgq-------------vlslptsgdaqasrellhavarqp 371
WP_009206052 346 VSWKSYTPARGEKIDKvarrfsisvarlkeinsitkhnklaagqtllv----plshneaaipdfdevaqaseaedaaplr 421
WP_129188543  97 ---VTVHTVAPGETLWGFARQIaapgqdvRDVVEELRDLNELAS-GALRVGQTILI 148
WP_040529333 399 gdiKLTHTVQKGDSLWSIARKH-------GVSHASLAHWNGMAPkDPLRTGQDLVI 447
WP_083300779 459 plaVLKHRVTRGDTLYNIASRY-------GMNVADLRKLNRLDG-DDVRLGTTLKV 506
WP_047781571 399 atsKVKYAVRAGDTLSSIAKRH-------KVKTSDIQSWNKLAKnSKLKVGQTLQI 447
NP_250503    415 parTRSYKVKNGDSLWQIARNN-------GVDVNDLKRWNGLDK-HALKVGQTLKL 462
NP_798675    414 gqlKLSHVVQSGESLWSIARDN-------KVSHKSLAKWNGMGPkDTLRVGQKLVI 462
WP_111739633 403 sttSTKYKVRSGDTLSSIAKRH-------KVKTSDIQRWNKMAKnGKLKVGQTLQI 451
WP_013856225 409 gqyKLSHTVAKGDSLWSIAKQH-------NVSHQSLAKWNGMGPrDTLKIGQKLVI 457
WP_041755505 372 aatPRSYRVKPGDNLWDIAKAQ-------RVSVRDLQRWNKLSG-SQLKVGQALFL 419
WP_009206052 422 vssRFVYAVKKGDTLVSIAKHH-------KVSALQIKSLNNLKS-NRLSSGQKLVI 469
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