Conserved Protein Domain Family
TFP_LU_ECD_Ly6E

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cd23543: TFP_LU_ECD_Ly6E 
extracellular domain (ECD) found in lymphocyte antigen 6E (Ly-6E) and similar proteins
Ly-6E (also called retinoic acid-induced gene E protein (RIG-E), or stem cell antigen 2 (SCA-2), or thymic shared antigen 1 (TSA-1)) is a GPI-anchored cell surface protein that regulates T-lymphocytes proliferation, differentiation, and activation. It restricts the entry of human coronaviruses, including SARS-CoV, MERS-CoV and SARS-CoV-2, by interfering with spike protein-mediated membrane fusion. It plays an essential role in placenta formation by acting as the main receptor for syncytin-A (SynA). It may also act as a modulator of nicotinic acetylcholine receptors (nAChRs) activity. Ly-6E contains an extracellular domain (ECD) which belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).
Statistics
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PSSM-Id: 467073
Aligned: 35 rows
Threshold Bit Score: 73.9275
Created: 27-Nov-2018
Updated: 27-Apr-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q16553        19 SSLMCFSCLNqksNLYCLkpTICSDQDNYCVTVSasagignlvtfgHSLSKTCSPACPIPEgvnvgVASMGISCCQSFLC 98  human
XP_020667493  20 LSLQCYKCEDqssNSNSIesVKCAETDKFCVSTIitvgk--genaeRQFTKGCSPNCTEREvd-tgVATVTSKCCTFSFC 96  central bearded...
XP_027687419  23 HSLKCYTCIAqssNDQCLipTDCTDGDKYCATIVgtdks--sssgaVRITKLCLPMCTAASqh-agLGDVSTSCCQRDYC 99  Green sea turtle
XP_020667476  33 SSLKCYTCTAqssNDRCMtpTACSAADKYCMTIVgalei--gspgaVRLSKLCMPECTETN-----THGISTSCCQSDFC 105 central bearded...
XP_015272144  22 EELWCYSCENertAMNCEhmQKCAESDSYCVTSVihge-----sgeHRFSKGCSPRCSEHRvdvahPTSIFTQCCRQSFC 96  Gekko japonicus
XP_016850915  21 HCLWCYQCEDepsNQNCLkmAKCAKADKFCVTTViaagr--gqsseQQITKACSPNCTEHKvd-tgIASVATRCCTSSFC 97  green anole
XP_020667484  19 DSLWCYRCEDepsNWNCMkmVKCAETDRYCTTTVttsgr--dnnvsYRLNKKCVPTCTENFid-tgMGSVSTKCCESSLC 95  central bearded...
XP_026546448  19 YSLACYSCENepsNWNCMsvKKCAETDKYCTTVKtvsrgrqgepndYRISKRCAPTCDQNFmd-tgSSSIATKCCQFSFC 97  mainland tiger ...
XP_019409118  19 HALLCYTCNAqpsNDGCLvaDDCPDNAKYCSTTVsmspp--gspsgIRITKMCMRMCQETFq---sHGNVSTTCCQTDYC 93  Australian salt...
XP_028594378  16 LSLKCYSCAThsnSSHCMipTVCSELDKYCKTTVapset--gssstAHVSKTCAAECTEIN-----HHGVSTSCCQRDFC 88  Common wall lizard
Q16553        99 N 99  human
XP_020667493  97 N 97  central bearded dragon
XP_027687419 100 N 100 Green sea turtle
XP_020667476 106 N 106 central bearded dragon
XP_015272144  97 N 97  Gekko japonicus
XP_016850915  98 N 98  green anole
XP_020667484  96 N 96  central bearded dragon
XP_026546448  98 N 98  mainland tiger snake
XP_019409118  94 N 94  Australian saltwater crocodile
XP_028594378  89 N 89  Common wall lizard
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