Conserved Protein Domain Family
7tmA_5-HT1E

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cd15335: 7tmA_5-HT1E 
serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors
The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.
Statistics
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PSSM-Id: 320457
Aligned: 4 rows
Threshold Bit Score: 433.582
Created: 13-Nov-2008
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding site [chemical binding site]
Evidence:
  • Comment:based on sequence similarity to Human 5-HT1B G protein-coupled receptor bound to the agonist antimigraine medications dihydroergotamine and ergotamine.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                   ##  #
P28566        23 MLICMTLVVITTLTTLLNLAVIMAIGTTKKLHqPANYLICSLAVTDLLVAVLVMPLSIIYIVmdrWKLGyfLCEVWLSVD 102 human
EMP42610      23 MLVTLTLALITILTMLLNSAVITAIGTTKKLHqPANYLICSLAVTDLLVALLVMPLSITYIVmdtWTLGyfICEIWLSVD 102 green seaturtle
XP_002665689  35 LAIVALLSLLTLLTAVVNGAVIAAICTTRKLHlPANYLICSLAVTDFLVSVLVMPISILYITteeWLLGtyVCEAWLSVD 114 zebrafish
XP_002933964  20 MLISLTLAIITILTTVLNSAVILAICTTKKLHqPANYLICSLAVTDFLVAILVMPLSITYIVmdtWTLGyvICEIWLSVD 99  western clawed ...
Feature 1        #  ##                                                                 #         
P28566       103 MTCCTCSILHLCVIALDRYWAITNAiEYARKRTAKRAALMILTVWTISIFISMPPLFWRshrrlsppPSQCTIqhDHVIY 182 human
EMP42610     103 MTCCTCSILHLCVIALDRYWAITDAiEYARKRTAKRAGLMIVTVWTISIFISMPPLFWRnhhs-vtiPSECRIqhDHVIY 181 green seaturtle
XP_002665689 115 VTCCTCSILHLCVIALDRYWAITKAiEYARKRTARRAGVMVAIVWVISIFISIPPLFWRqrgd-angPQQCIIehDHVGY 193 zebrafish
XP_002933964 100 MTCCTCSILHLCVIALDRYWAITDAiEYARKRTVKRAGIMILTVWTISVFISIPPLFWRnhhn-iniPSKCIIqhDHLIY 178 western clawed ...
Feature 1           #   #                                                                        
P28566       183 TIYSTLGAFYIPLTLILILYYRIYHAAkslyqkrgssrhlsnrstdsqnsfasckltqtfcvsd-fstsdpttefekfha 261 human
EMP42610     182 TIYSTFGAFYIPLMLILILYYRIYHAAkslyqkrgssrhlsnrstdsqnsfasckltqtfcvsd-fstsdpttefdkiha 260 green seaturtle
XP_002665689 194 TIFSTFGAFYIPMTLILILYSRIYSAAktlyqkrgssrhlssrstdsqtsfnhcrvkhafcvsdvstsdhtmefernnvt 273 zebrafish
XP_002933964 179 TIYSTCGAFYIPLTLILILYYRIYHAAknlyqkrgssrhlsnrsndsqnsfahckltqtfcvsefstsdpttefekmnas 258 western clawed ...
Feature 1                                                  #  ##     #         #  ##  #   #      
P28566       262 sirippfdndldhpgerqqissTRERKAARILGLILGAFILSWLPFFIKELIVGLSi-yTVSSEVADFLTWLGYVNSLIN 340 human
EMP42610     261 svrippidndlelagdrqqissTRERKAARILGLILGAFILSWLPFFIKELIVGLSv-rTVSAEVADFLTWLGYVNSLIN 339 green seaturtle
XP_002665689 274 ivrmptfdtetpeldernqictSRERKAARILGLILGAFILCWLPFFLKELLVGLKvlmTPSPQVSDALTWLGYINSLVN 353 zebrafish
XP_002933964 259 vrtppydndidifgdrqqqissSRERKAARILGLILGAFILSWLPFFIKELVVGIQl-cTVSPEVADFLTWLGYVNSLVN 337 western clawed ...
Feature 1                       
P28566       341 PLLYTSFNEDFKLAF 355 human
EMP42610     340 PLLYTSFNDDFKLAF 354 green seaturtle
XP_002665689 354 PLLYTSFNEDFKQAF 368 zebrafish
XP_002933964 338 PLLYTSFNDDFKLAF 352 western clawed frog

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