Conserved Protein Domain Family
TAFA
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pfam12020: TAFA 
TAFA family
This family of secreted proteins are brain specific and thought to be chemokines. These proteins are found in vertebrates. Proteins in this family are typically between 94 to 133 amino acids in length and contain a number of conserved cysteines.
Links
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Statistics
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PSSM-Id: 432266
Aligned: 8 rows
Threshold Bit Score: 131.867
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
XP_004068898  43 GGTCEVIAAHRCCNKNRIEERSQTVKCSCLPGKVAGTTRNKPSCVDASIVIGKWWCEMEPCLEGEECKTLPDNSGWMCS- 121
XP_008117527  38 VGTCEITALDRDMSHPKRMIARQTARCSCRRGQVAGTTKAKPACVDAQIIVNRQWCGMEPCDDGEQCTLLINRSGWSCTr 117
XP_020947018  42 AGTCEIVTLDRDSSQPRRTIARQTARCACRKGQIAGTTRARPACVDARIIRTKQWCDMLPCLEGEGCDLLINRSGWTCTq 121 pig
XP_030911431  41 TGTCEVVALHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVEQKWWCHMQPCLEGEECKVLPDRKGWSCS- 119 medium ground-f...
XP_004769866  40 QGACEVIAAHRCCNRNRIEERSQTVKCSCFSGQVAGTTRAKPSCVDASIVLRKWWCQMEPCLRGEECRVLPDLSGWSCS- 118 domestic ferret
XP_012034137  43 QGTCEVIATHRCCNRNHIEERSQTVKCSCFSGQVAGTTRAKPSCVDAsIILQKWWCHMEPCLPGEECKVLPDLSGWSCS- 121 sheep
XP_008102069 143 GGTCKVIAVRRCCNHNHIEERSQTIQCSCLPGKVAGTTRGKPSCVDTSIVTGKWWCDMEPCLDGEECKALPDNSGWMCS- 221 green anole
CAG01061       1 AGSCEIIRLDQDRSRPWRSPARQTARCACGPGQTAGTTRARPACVDVHIVWRRRWCDMTPCLDDEDCRLLVDQSGWSCRq 80  spotted green p...

XP_004068898 122 SGNKIKTtrI 131
XP_008117527 118 QLGRIKT--V 125
XP_020947018 122 PGGRIKTttV 131 pig
XP_030911431 120 SGNKVKTtrL 129 medium ground-finch
XP_004769866 119 GGHKVKTtkv 128 domestic ferret
XP_012034137 122 SGHKVRTtkv 131 sheep
XP_008102069 222 VGNRVKTtkI 231 green anole
CAG01061      81 PGGRVRTttV 90  spotted green pufferfish
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