Conserved Protein Domain Family
7tmA_OR1330-like

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cd15946: 7tmA_OR1330-like 
olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320612
Aligned: 5 rows
Threshold Bit Score: 418.806
Created: 16-Dec-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
NP_666446     28 SILFIVFLLIYLSSVLGNGLIIMLVCLDTQlhtpMYFFLSTLSLLDMSYVTTTMPQMLVHLlahsQTISFvgCWLQMFVF 107 house mouse
NP_001000585  28 IILFNVFFFLYLSTLVGNGLIVTLIHLDSRlhtpMYFFLSVLSLLDMSYVTTTVPQMLVHLvcqkQTISYsgCVAQMYIF 107 Norway rat
NP_001000515  25 PLLFAFFLVFYLLILLSNSLLLTLIYQDSRlhtpMYFFIGVLSMLDVCYTTTTVPQMLVHIlsrkRAISFtrCVAQMYIF 104 Norway rat
EMP23965       3 LLLFAVFLAIYLAILFGNSLIFALIRIDSHlhmpMYFFLANLSFLDISYTTTTVPQMLLHLlskkKSISYtgCIIQMYIF 82  green sea turtle
NP_001000410  28 SILFIVFLLIYLSSVLGNGLIIMLVCLDTQlhtpMYFFLCTLSLLDMGYVTTTVPQMLMHLlahsKTISFagCWVQMYVF 107 Norway rat
Feature 1        #  #                                            # #####                         
NP_666446    108 SALGITECTFFVVMAYDRYVAICYPlrYTVILnWGLCIHLTAGSWVCGLFSSLLHTFftmsLPYCGPnRVNHYfCEGPSV 187 house mouse
NP_001000585 108 LVLGITEGWLFSVMAYDRYVAICHPlrYKVIMrPWLCGAMVVFCGLWGVSCSLIYTVftmrLPYCGPnEINHFfCEVPAV 187 Norway rat
NP_001000515 105 LLFGVTESWLFSIMSVDRYVAICHPlrYKVIMsRGMCLLMVGICAAYGVVGGLCYTFfamrLPYCGPnEIDHYfCEVPAV 184 Norway rat
EMP23965      83 LSLGITECTLYTVMAYDRYMAICHPlhYTIIMsMSVCVKMAASSWVGGFFFAMVHTSvtmrLPYCGPnEINHFfCEVLAI 162 green sea turtle
NP_001000410 108 GALGIAEGTFFVVMAYDRYVAICYPlrYSVILnWGLCIRLAAGSWICGFFSSLLHTYftmsLPYCGPnRVNHYfCEGPSV 187 Norway rat
Feature 1                  #  ### ### ##                                            #  ## ##  #  
NP_666446    188 RSLACmdthvIEMVDFVLSVFVIVIPISLIVASYIGIAKAIlkikstEGRCKAFSTCASHLTVVTFFYAPATYIYMRPns 267 house mouse
NP_001000585 188 LKLACadtslNDRIDFILGFILLLVPLSFILASYVCIFATIlrirsaQGRLKAFSTCASHITVVTMFCGPAMFMYMNPga 267 Norway rat
NP_001000515 185 LKLACadtslNDLVDFITGFNVIVVPLSLVAIVYANIFNTImkirstQGRIKAFSTCTSHITVVTMFAIPCIIMYMSPgs 264 Norway rat
EMP23965     163 LKLACadtrvTEMVVFVMGVILLMIPVFLILVSYVFILMAIlrissvEGRFKAFSTCTAHITMVTLSYGAAMFMYMHPas 242 green sea turtle
NP_001000410 188 WSLACmdthlIEMVDFVLSVFVVVTPISLIVASYIHIVKAIlkikstQGRCKAFSTCASHLTVVTFFYAPATYIYMRPns 267 Norway rat
Feature 1           ## ###  #  ##              
NP_666446    268 sySPERDKQISLFYNTFTALLNPVVYSLRN 297 house mouse
NP_001000585 268 naSPERDKKLALFYNVISAFLNPIIYSLRN 297 Norway rat
NP_001000515 265 gsLSNSGKKMALFYNIATAFLNPVIYSLRN 294 Norway rat
EMP23965     243 nyAPERDKYFSFFYSVVSSLLNPLIYSLRN 272 green sea turtle
NP_001000410 268 slSPDRDKQISLFYNVFTALLNPVVYSLRN 297 Norway rat

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