Conserved Protein Domain Family
7tmA_TAAR1

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cd15314: 7tmA_TAAR1 
trace amine-associated receptor 1 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors
The trace amine-associated receptor 1 (TAAR1) is one of the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. TAAR1 is coupled to the Gs protein, which leads to activation of adenylate cyclase, and is thought to play functional role in the regulation of brain monoamines. TAAR1 is also shown to be activated by psychoactive compounds such as Ecstasy (MDMA), amphetamine and LSD. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.
Statistics
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PSSM-Id: 320438
Aligned: 30 rows
Threshold Bit Score: 387.752
Created: 28-Jul-2013
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                   #   #
Q96RJ0        24 ASLYSLMVLIILTTLVGNLIVIVSISHFKQlhtpTNWLIHSMATVDFLLGCLVMPYSMVRSAehCWYFGevfCKIHTSTD 103 human
NP_001076373  23 VPMLIAIMLIISMTFIGNLLVIISIGHFRQlhtpTNQLILSLALCDFLIGLFVMPLSAVRSMqgCWYFGeflCKLHTCID 102 zebrafish
NP_001076546  35 APLYLLFIIAIILIVFGNLWVICTISFFQQlhtpTNYLILSMAVSDLLLGSFVMPPSMLRSLetCWYFGdffCKFHSATD 114 zebrafish
EMP33523      23 MSMYSLMVCIILATLAGNLTVIISIAHFKQlhtpTNFLILSMSTVDFLLGCFIMPYSMVRSVenCWYFGelfCKIHTSTD 102 green seaturtle
XP_006626527  34 SPLYLIFVAVILFTVCGNLFVIISIAHFKQlhtpTNFLVLSLAVADLLLGGFIMPPSMVRSLetCWYYGdlfCKIHSSTD 113 spotted gar
XP_006010955  34 IPMYIFMLSTISVTICGNLVVIVSIAHFRQlhtpTNYLILSLATVDFLLAIFVMPYSMVRSVetCWYFGdlfCKIHSSID 113 coelacanth
XP_002935857  25 IPMYVFMVSTILATVVGNLAVIISIAHFKQlhtpTNYLILSMSTVDFLLGSCVMPYSMVRSVenCWYFGdlfCKVHTSTD 104 western clawed ...
XP_006010958  32 IPIYAAIGGTILITVCGNLVVIISIAHFKQlhtpTNFLVMSMAVVDLLLGSMVMPYSMVRSVenCWYFGdifCKVHSSTD 111 coelacanth
XP_007897420  34 ITLYLLAVLAILVTLFGNMLVIISIAHFKQlhtpTNYLVFSLAIADFLLGCIVMPYSLIRSIesCWYFGilfCKLHTSFD 113 elephant shark
XP_007259908  34 VPLYILFALIVFLIVSGNLLVICIILLSQHlqmaTNCLILSLSVAGLLLGGLVLPPSMVRSLetCWYFGehfCDFHSTAD 113 Mexican tetra
Feature 1        #  ##                                                                           
Q96RJ0       104 IMLSSASIFHLSFISIDRYYAVCDPlrYKAKMnILVICVMIFISWSVPAVFAFGMIFLElnfkgaeeiyykhvhCRGGCS 183 human
NP_001076373 103 ITLSTSSIFHLVSVSAERFCAVCGPlrYRSCFgLSTVLLMISISWLIPGIFAYVMTFLEinihggkdfydahvrCVGGCH 182 zebrafish
NP_001076546 115 FTLCNASVLHLVFISIDRYYAVCQPfhYQSRMtTRVSVFMILISWSFSAFFGFGIIFSElkiekkr-teelhvaCKGGCL 193 zebrafish
EMP33523     103 IMLSTASIFHLSFISIDRYCAVCDPlrYKSKInTCIIVVMIVISWTVPAIFAFGMIFLElnlkgaeeifynhihCVGGCF 182 green seaturtle
XP_006626527 114 VMLSTTSILHLSFISIDRYYAVCEPlkYKTKItVCVALYMVIISWAVSAVIGFGMIFLElnikgmedtyynrfdCVGGCV 193 spotted gar
XP_006010955 114 IMLSTASIFHLSFISIDRYYAVCDPlrYKTKItAFVTLIMISMSWIVSAVFAFGMIFLDlnikgdedfyyqyvvCAGGCI 193 coelacanth
XP_002935857 105 IMLSTSSIFHLSFISVDRYFAVCDPlrYKTKMnVFSVSLMIVTSWVVPTIFAFTMVFLElnikgtesyyynqvsCFGGCA 184 western clawed ...
XP_006010958 112 MMLCTASILHLCFVAVDRYYAVCNPlqYKAKItGFVVMMMITISWMLPAVVSFAVIFLGlhmkgveefynnhtkCTGGCV 191 coelacanth
XP_007897420 114 LVLCAASIIHLCCISVDRYYAVCDPlkYKTTItVSTVLIMICLSWALSFLVGFVIIFLElhlieikdfyyheiaCFGGCT 193 elephant shark
XP_007259908 114 IILCNTTVWHLTFISVDRYLAVCHPvhYQNRViKRLYIVMILTSWGLSSVFGFAITLSNpevlik---ddpqktCIGECL 190 Mexican tetra
Feature 1        #      #  ##  #                                                                 
Q96RJ0       184 VffSKISGVLTFMTSFYIPGSIMLCVYYRIYLIAkeqarlisdanqk--lqiglemkngisqSKERKAVKTLGIVMGVFL 261 human
NP_001076373 183 VffSHGPAVFTSVFSFYIPGFIIVVIYSRIYMVArnqersirlqln----qlrrvypsrdvqLQTRKATVTIAIVVGAFL 258 zebrafish
NP_001076546 194 AlhGREIGVTYSLVFYFLPMFIIVSLYSRVFIIAlkhvrvins-----------aasslsatKMDLKATKTLAIIIGVFM 262 zebrafish
EMP33523     183 VffSETSGVVASMISFYIPAFVMLCIYGKIYAIAkrqarsikdaasq--tqirfemkhhispSRERKAAKTLGIVMGVFL 260 green seaturtle
XP_006626527 194 LiqSEASSTISSTLSFDIPGFMMVGIYFKIFLVArrqartiqgivsq--sktsedgktmtssKTERKAAKTLGIVMGVFL 271 spotted gar
XP_006010955 194 VffTKTSGVVASLFSFYIPGVIMVCIYGKIYLVArdqarsiedvev----qtaeqnrgrvskKRERKAAKTLGIVVGVFL 269 coelacanth
XP_002935857 185 VffSQTSGLVASMVSFYIPGFVMLCVYGKIYVIArrqarsikdsanqmpfqitlgvnqhvsrSRDRKAAKTLGIIMGVFL 264 western clawed ...
XP_006010958 192 LflNEASLVFGSMISFYVPGVIMVCIYGKIYLIAskqaraikgvan----kakeasrsrisrNRERKAAKTLGIVMGDFL 267 coelacanth
XP_007897420 194 LmmGKVCALVYSTISFYFPAFIMVCIYTKIYLVAkkqartinnlsrk--vqpinegnsiasqRSERKAAKTLGIVMGVFI 271 elephant shark
XP_007259908 191 AlhTKEIGVEYSIIFFFMPVSIIVSVYSKVYCVAqrhsraihsy---------ahnpkamptSKDLKATKTLGIVIGNFL 261 Mexican tetra
Feature 1          #  ##  #              #   #   #                     
Q96RJ0       262 ICWCPFFICTVMDpflhyiiPPTLNDVLIWFGYLNSTFNPMVYAFFYpwFRKAL 315 human
NP_001076373 259 VCWTPFFLCNILNpfigyatPPMLIDVLMWFGYANSTLNPFIYAFMHswCRKAV 312 zebrafish
NP_001076546 263 SCWTPYFMCNIIDpivnhtiPALLYEVLMWVAYLNAVFNPLVYAFFYswFRDKS 316 zebrafish
EMP33523     261 ICWSPFFFCTATDpfmnystPPILIDALMWFGYLNSTFNPLVYAFFYmwFRRAL 314 green seaturtle
XP_006626527 272 SCWTPFFLCNIMDpifnysiPPVLLDTLVWLGYLNSTFNPLVYAFFYnwFRKAL 325 spotted gar
XP_006010955 270 FCWSPFFVCNLMDpflnyktPSLLFDALIWFGYLNSACNPIVYGFFYtwFQKAL 323 coelacanth
XP_002935857 265 ICWTPFFFCTATDgfinyviPPIVIDAFVWIGYLNSTFNPMVYAFFYlwFQRAL 318 western clawed frog
XP_006010958 268 LCWFPYLFCNIMDpflnyrtPPVLFEVLVWFAYLNSTFNPIMYGFFYiwFREAL 321 coelacanth
XP_007897420 272 LCWSPYFVCDSIEpfikystPPVLFDAFFWVGYLNSTFNPMIYGFFYswFRKAL 325 elephant shark
XP_007259908 262 FCWTPFFMCNIMDpilnhsiPSVLYEVLMWFSYLNSLFNPLIYAFFYrwFRETA 315 Mexican tetra

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