Conserved Protein Domain Family
TCP1_epsilon

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cd03339: TCP1_epsilon 
TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Statistics
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PSSM-Id: 239455
Aligned: 22 rows
Threshold Bit Score: 850.435
Created: 6-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:stacking interactions
Evidence:
  • Comment:interactions of one subunit to subunits of the second ring
  • Comment:annotation based on structure of bacterial homolog GroEL

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
XP_323299  15 DEQGRPLIVVRDQGk--KKRQYGNEAVKNHILAARTVANIVKTSLGPRGLDKILISpdGDITVTNDGATILQQMEitNHV 92  Neurospora crassa
CAI74699    6 DEFGKPFVIVREQE---KKRITGLEAHKSNILAARGVSDTLTTSLGPKGMDKIIVGpdGQVTITNDGATVLQKMEiqHQC 82  Theileria annulata
CAB57321   12 DDQGNPFILVRDQEk--KRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISpdGEITVTNDGATILDQMEveHQI 89  fission yeast
AAL09332    6 DEYGRPFIIIREQDs--KKRLKGVDAYKSNIAAAKTIASTLRSSLGPKGMDKMMISpdGEVSVTNDGATIVEKMDiqHPV 83  Tetrahymena pyrifo...
EAN80369    6 DEYGRPFLLVKEQAn--KERVTGVEAQKANILAAISVSNVLKTSLGPRGMDKILVTqdNEVVVTNDGATIMDLMDidNEI 83  Trypanosoma brucei
XP_760106  11 DEYGRPFIVVREQGk--KTRANGIQAIKNHISAAKTVANILKTSLGPRGLDKILISpdGDIQVTNDGATIMNNMEldHQI 88  Ustilago maydis 521
EAK90630   25 DEYGNPFIILREQEq--KQRLKGIDAHKSNILAAKSVADILRTSLGPKGMDKIVVSpdGEIVVTNDGATIMEKMNinNEC 102 Cryptosporidium pa...
NP_473314   6 DEYGQPFVILREEE---KKRIKGIEAHKSNILAAKVVADILKSSIGPRGMDKIIVSedNNVTVTNDGATILEKIDvqHEC 82  Plasmodium falcipa...
EAL50356    5 DENGRPFIIVREQAekkENRLKGVEATKAHILAAKSVADILKTSLGPKGMDKMMVSqdGDVTVSNDGATIMQDMNvdHPI 84  Entamoeba histolyt...
XP_767931  16 DENGNPVYLMREGTe--KKRARGLEAHKSNITIARALANTLRTSLGPRGMDKILVSgdRELTITNDGATILERMEvdNHI 93  Giardia lamblia AT...
Feature 1                                                                                     
XP_323299  93 AKLLVELSKSQDDEIGDGTTGVVVLAGALLEQAAELIDKGIHPIRIADGYDQACDIAVAELDRISDVIefs-keeTANLV 171 Neurospora crassa
CAI74699   83 AKLLVDLSKSQDEEVGDGTTGVVILAGALLDKALKFLDRGLHPLHIADGYEQACSIAIDTLKKIAIKQdif-sdnYQILK 161 Theileria annulata
CAB57321   90 AKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVdfs-penTTNLF 168 fission yeast
AAL09332   84 AKLMVELSQSQDNEIGDGTTGVVVFAGALLEQANKLIDKGLHPLKIADGFDKACEIAVARLDEIAEEIdiq-ennHERLI 162 Tetrahymena pyrifo...
EAN80369   84 GQLMVELSKSQDSEIGDGTTGVVCLAGALLEQASGLLDKGIHSSRISEGFEKACEIACKRLEEIADTVpvs-reeYSYLL 162 Trypanosoma brucei
XP_760106  89 AKLLVELSKSQDDEIGDGTTGVVVLAGALLEQSEALLDRGIHPIRIADGFERACNLAVQELEKVADLVefd-kdnIDELM 167 Ustilago maydis 521
EAK90630  103 GKLLVELSKSQDAEIGDGTTGVVILAGALLERSVELLEKGIHPIRIANGFEYACSIALKKLEEISLKNgtvsdiqNNLLF 182 Cryptosporidium pa...
NP_473314  83 AKLLVELSKSQDNEIGDGTTGVVIIAGVLLEEAYALIDKGIHPLRIADGFENACNIALKVIEDIALTVdie-endHKILK 161 Plasmodium falcipa...
EAL50356   85 AKLLVELSQSQDSEIGDGTTGVVVFAGSLLEHSLKLVERGIHPTRIATGYEEAAKIAVDELKKIAIEKek---mdRDSIV 161 Entamoeba histolyt...
XP_767931  94 ARLLVDLSKCQDNEIGDGTTGVVVLAGSLLEHAETLLDKGIHPIRISDGYDMACDVAIKHLESIATTYsfs-adnKEPLI 172 Giardia lamblia AT...
Feature 1                                                                                     
XP_323299 172 KVARTSLGSKIVskaHDQFANIAVDAVLSVADLERKDVDFELIKVDGKVGGALEDTILVKGVIIDKDFSHPQMpsEVRDA 251 Neurospora crassa
CAI74699  162 QAAFTSLGSKVVsscQSHLADIAVRAVMAVADTERKDVNLELIKIESKAGGRLEQTELIQGIVLNKDLSHSQMrkTTRDA 241 Theileria annulata
CAB57321  169 RSAKTSLGSKVVskaHDHFANIAVDAVLSVADLQRKDVDFELIKVDGKVGGSVDDTKLVKGVVVDKDMSHPQMphRIENA 248 fission yeast
AAL09332  163 EAAMTALSSKVVsknKRKMAQIAVDAVLSVADLERRDVNFDLIKLQEKTGGSLEDTRLIQGILIEKDMSHPQMvkEVKDA 242 Tetrahymena pyrifo...
EAN80369  163 QTARSTLNSKVVnrdRDRLAKICVDAVLSVADMERRDVNLDLIKMEGKVGGCLEETCLVNGIVIDKDFSHPQMpkVLKNP 242 Trypanosoma brucei
XP_760106 168 KVAKTCLGSKIVskaSDKFAKIAVDSVLSVADLKRRDVDFELIKVDGKVGGALEDTQLVQGVVIDKDMSHPQMprVVKDA 247 Ustilago maydis 521
EAK90630  183 NSAMTALGSKVVssqQKHFAKMAVDAVLAVADLDRRDVNFDLINIQGKPGGRLEESCIVNGIVLDKEMSHPQMnkKIENA 262 Cryptosporidium pa...
NP_473314 162 KVAKTSLSSKIVsskKDLLSNIVVDAVLSVADMKRKDVRFDLIKIEGKTGGLLEESTLIKGIVLNKELSHSQMikEVRNA 241 Plasmodium falcipa...
EAL50356  162 AACEVALGSKIVnrcKRHLAEVCADAVLSVYDKERNDVNMDLIKLVSKAGGRMEDTELVDGLMLEKDFSHAQMpkAVKDA 241 Entamoeba histolyt...
XP_767931 173 KAAMTSLGSKVInryHRTMAEVAVDAVFRVADLQRNDVDFELIKVRSKIGGKLEDIKIINGFLIDQEMSHPGMrkSVSHA 252 Giardia lamblia AT...
Feature 1                                                                                     
XP_323299 252 KIAILTCAFEPPKPKTKHRLDITSVEEFKKLQTYEREKFIEMIQQIKNTGAnLAICQWgFDDEANHLLLqnNLPAVRWVG 331 Neurospora crassa
CAI74699  242 KIAILTCPFEPPKPKTKNKIEIKDVESYEKLQECERNYFLDMVDRVEKSGAnFVICQWgFDDEANHLLMqrGIPAVRWVG 321 Theileria annulata
CAB57321  249 KIAILTCPFEPPKPKTKHKLDITSVSEFEALQAYEKEKFQEMIKHVKDAGAnLVICQWgFDDEANHLLLqnNLPAVRWVG 328 fission yeast
AAL09332  243 KTAILTCPFEPPKPKTKHNINISSAEDYKKLYQQEQQYFREMVDDCKKSGAnIIMCQWgFDDEANHLLLqaDLPAVRWVS 322 Tetrahymena pyrifo...
EAN80369  243 KIAILTCPFEPPKPKTKHTVHISSAEHMKEIHEQEQEYFRNQVKLCKQAGAdLVICQWgFDDEANYLLYrnDLPAVRWVG 322 Trypanosoma brucei
XP_760106 248 KIAILTCPFEPPRPKTKHKLDITSVDEYRKLQDYERQKFEEMIKRVKDCGAnLVVCQWgFDDEANHLLLqhQLPAVRWVG 327 Ustilago maydis 521
EAK90630  263 KIALLTCPFEPPKPKTKHKIDIKSSSDFDVLFETEQKYFSEMIDKVVSSGAnMVVCQWgFDDEANHMLSqrGLPSIRWVG 342 Cryptosporidium pa...
NP_473314 242 KIAILTCPFEPPKPKIKHKLNITNVDAYRDLQAIEKKYFYDMVASLKKAGAnFVICQWgFDDEANYLLLkeNIPAIRWVG 321 Plasmodium falcipa...
EAL50356  242 KVCILSCPFEPPKTKTTTNMNVTSVEAYNQLYQQEQAYFRMQVEKVKEAGAnVVLCQWgFDDEANHLLLsnGINAVRWVG 321 Entamoeba histolyt...
XP_767931 253 KIAVLTCPFEPPKPKTTYKIDVDSVEKYNTLYREEQQFFINMIEHLKEAGAnFVVCQWgFDDEANHLLMqnDINAVRWVK 332 Giardia lamblia AT...
Feature 1                                                                                     
XP_323299 332 GPEIELIAIATNGRIVPRFEDLKPEKLGRAGVVREMTFgttREKMLVIEECAn---------tRAVTVFVRGSNKMIIDE 402 Neurospora crassa
CAI74699  322 GVEMELIAIATGGQIVARFEDLTPEKLGTAKLVREIATgtdHSEVVVIEGCPn---------sRAVTVLIRGGNQMTVCE 392 Theileria annulata
CAB57321  329 GPEIELIAIATNGRIVPRFEDLSSDKLGSAGIVREVSFgttRDKILVIEKCAn---------sRAVTVFVRGSNKMIVDE 399 fission yeast
AAL09332  323 GTDIELIAVATGGRIVPRFEELSNDKLGEAKLVREIQFgtsNERMLVIEDCKq---------sKAVTILIRGGSNMIVSE 393 Tetrahymena pyrifo...
EAN80369  323 GVELEMIAIATGGRIIPRFEDLQSAKLGTCGTVREVGFgttKDRMIFIEECPs---------sKAVTIFIRGGNKMMIEE 393 Trypanosoma brucei
XP_760106 328 GPELELIAIATNGRIVPRFEDLSPEKLGRAGIVREVGFgttRDRMLIIEECAn---------tRAVTVFVRGSNKMIIDE 398 Ustilago maydis 521
EAK90630  343 GVEIELLAIATGAHIVPRFEDLAENKLGSAALVKEVTSgteKDKLIFIEGCSk---------sKAVTVLIRGGNQMVVDE 413 Cryptosporidium pa...
NP_473314 322 GVEMELIAIATGGKIIPRFEDIDESKLGKADLIREISHgtvNNPMVYIEGCSn---------tKAITILLRGGNQMMIEE 392 Plasmodium falcipa...
EAL50356  322 GVELELLAIATGARIVPRFEELTKDKLGSCKSISEMSFgtvKEKMIKVEGCPn---------sNAVTIFIRGGNKMVLAE 392 Entamoeba histolyt...
XP_767931 333 GEDIEAIALITGARIIPRFEDISSDKLGYAEIVREVSLgtsSDKVMIFEGLQpqqttadsvphMISTVFIRGGNNMIIEE 412 Giardia lamblia AT...
Feature 1                                                 #                 #        # ##  #  
XP_323299 403 AKRSLHDALCVVRNLVRDnRVVYGGGSAEIACSLAVEDAavkspGLEQYAMRAFADALDTIPMTLAENSGLNPIATLAEV 482 Neurospora crassa
CAI74699  393 TERSIHDAICCVRNLIRDsRVVPGGGAPEIACSIAVEKAaanfdKLEQYSVNGFAEALLSIPLALADNSGLNSFDYVTKA 472 Theileria annulata
CAB57321  400 AKRALHDALCVVRNLIRDnRVVYGGGAAEISCSLAVTKEaekipGIDQYSMGAFADALDTIPLALAENSGLSSIEALTAV 479 fission yeast
AAL09332  394 ARRSIHDANCVIRNLIKCpKIVYGGGSAEIACSLTVNQEadkisSVEQYAVRAFADALEDIPNALADNSGLNPIEAVANA 473 Tetrahymena pyrifo...
EAN80369  394 AKRSLHDAVCMVRNLIRDnRIVYGGGSAEIAASMAVLNYadtvsTVDQYAIRRFADALESIPINLALNSGLEPIKCLSRA 473 Trypanosoma brucei
XP_760106 399 AKRALHDAICVVRNLVVDnRVVYGGGAAEICASVAISKAadeiaSLEQYAMRAFASALDAIPLALAENSGYSPIETLAEV 478 Ustilago maydis 521
EAK90630  414 AKRCIYDALCVVRNLIRDsRVVPGGGASEIASSIAVQKAvesvsSIEQFAVEAFADALLSLPHALADNCGLDSISLVGEA 493 Cryptosporidium pa...
NP_473314 393 CERSVHDALCSVRNLIRDnRILPGGGSTEIYAALEIEKVadkckGIEQYAIRAFGNALLSIPINLCNNMGLNSIDIISEI 472 Plasmodium falcipa...
EAL50356  393 IERSIHDALCVARNYLRDnREVCGGGACEISMSLAVAEAskhckTVEHHAMSVYADALLAVPHALAENSGLNAIETVAAV 472 Entamoeba histolyt...
XP_767931 413 ARRSLHDAMCVVRNLIRDpRVIYGGGSAEISCSLAIAEAaehvgTVEQYALRAFSEALDIIPLTLARNSSIQPIETLAMV 492 Giardia lamblia AT...
Feature 1                                                                 
XP_323299 483 KSQqvkdpagrgrLGVDCmgrgsNNMKEAFVIDPLIGKKQQLMLATQLCRMILKINNVIV 542 Neurospora crassa
CAI74699  473 KARqike--nnpfIGIDCinleiDDLSKFGIFESLHSKVQQLSLATQVVKMILKIDDVIT 530 Theileria annulata
CAB57321  480 KARhvke--nkayLGIDClqtgsNDMRKQFVIDPLIGKKQQLLLATQLCRMVLKVNDIIV 537 fission yeast
AAL09332  474 KALqnsq--tnprIGVDCqlegtFDMREQKVYETYLSKKQQFQLATQVVKMILKIDDVIA 531 Tetrahymena pyriformis
EAN80369  474 RIEqveg--knpyAGVDCmdsgtLDMKKQQVFETLQGKCSQLRLATQVVKMILKVDDVIV 531 Trypanosoma brucei
XP_760106 479 KSRqvte--knpkLGIDCmgagdNDMKNCRVFDPLVSKRQQLLLATQLVRAVLKIDDVIE 536 Ustilago maydis 521
EAK90630  494 KQKqvsq--ddpnYGIDCdklcvESMEKIKVFESLASKQHQLALATQAVKMILKIDDVIK 551 Cryptosporidium parvum
NP_473314 473 KTKiiqd--ktknLGIDClnykvGDMIERGIFETFNSKYNQFSLATQVVKMILKIDDVIA 530 Plasmodium falciparum 3D7
EAL50356  473 KQMqvtn--knshFGIDClqvgtNDMTEQKVFESLHAKTQQILLATQVVKMILKVDDVIG 530 Entamoeba histolytica HM-1:IMSS
XP_767931 493 KAAqkkt--gshhLGIDCmqrntIDMKEQSVFETLSSKVQQLLLATQVVRMILKIDEVIT 550 Giardia lamblia ATCC 50803

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