Conserved Protein Domain Family
bacter_Hen1

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TIGR04074: bacter_Hen1 
3' terminal RNA ribose 2'-O-methyltransferase Hen1
Members of this protein family are bacterial Hen1, a 3' terminal RNA ribose 2'-O-methyltransferase that acts in bacterial RNA repair. All members of the seed alignment belong to a cassette with the RNA repair enzyme polynucleotide kinase-phosphatase (Pnkp). Chemically similar Hen1 in eukaryotes acts instead on small regulatory RNAs. [Transcription, RNA processing, Protein synthesis, tRNA and rRNA base modification]
Statistics
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PSSM-Id: 274962
Aligned: 18 rows
Threshold Bit Score: 641.664
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_07030057    2 LLTLSTTHK----P----ATDLGFLLHKNPARMQTEELSFGKAHIFYPEASEELCTVALMLEVDSIALA--RGRHGSsGD 71  Granulicella ma...
ZP_05479751    2 FLTVTTTHQ----P----ASDLGFLLHKHPGRVQSFELSAGQAHVFYPEASGTRCTAALMLEVDPVALV--RGKAGS-GD 70  Streptomyces sp...
WP_011318409   2 LLTISTTHS----P----ATELGYLLHKHPDRCQSFSLSFGQAHVFYPEANEQKCTAALLLDVDPVKLV--RGKGAT--- 68  Anabaena variab...
WP_012687745  27 ILTISTTAR----P----ATDLGYLLHKHPDRVQEFTQSCGVARVFYPEANENRCTVALLLDVDATRLA--RSSGRSaDY 96  Rhodococcus opacus
WP_011642114   2 LLKIATTHQ----P----ATDLGFLLRKNPANVHRADLPFGKSVFFYPETSAERCEAALLLEVDPIQLV--RGRKTAkGD 71  Maricaulis maris
WP_012190522   2 LLRLTTTHT----P----ATDLSFILHKHPDRVQTFPLPFGSAHIFYPEASAERCTIALLLDVDPVALV--RGNRGSeGM 71  Herpetosiphon a...
WP_020907670   9 LLTLTSTPT----PqtpdATALSYLLHKHPDRVQSFDLAIGTATVLYPEASAEKTTVAVIVDVDPIELVqsRYRRGKsGD 84  Rhodococcus ery...
WP_012084463  14 ILTVTAQRPapdvP----AGDLGFLLHKHPDRVQTAEQGAVTTHVLYPESSPERTTVALVLEVDPVGLV--RTARGEtQS 87  Kineococcus rad...
WP_011926628  11 FLSIATTHQ----P----ATDLGFLLNKHPDRLHEFELTSGKALIFYPEASEARCEAALVLDVDPIGLV--RGKGQSdGL 80  Bradyrhizobium ...
WP_015802283   2 LLTVTTTRA----P----ATDLGFLLHKHPDRAQTFTTSSGPAHVFYPRADEQACTVALLLEVDPVGLV--RGHGST--- 68  Actinosynnema m...
ZP_07030057   72 GgpLQPYVNDRPYAANSFLSVAIGRMLASALGGRSKDRPELAETAIPLIARIPCVAa-rG--GEDLVRRLFEPLGYAVVL 148 Granulicella ma...
ZP_05479751   71 GftLGQYVNDRPYAASSLLSVALKEVFRTALTGRCKSHPELAASAIPLDIRIPACP---G--GLDLVRRMFEPLGWTVEA 145 Streptomyces sp...
WP_011318409  69 ---LEQYVSDRPYVASSFMSVAIAQVFSTALGGRSKDKPELAQKSLPLVAKLSVLPc-rG--GEGFLRQLFEPLGYTVSA 142 Anabaena variab...
WP_012687745  97 A--LGQYVNDRPYAVSSLLSVALADVFRTARAGRCTLQPELAATPIPLEISLPALPc-sG--GPELAEQLFTPMGWTVEA 171 Rhodococcus opacus
WP_011642114  72 Gm-LAHYVNDRPYAASSFLSVAISRVLRDAMAGRAKEREDLAATAIPLELEITPLPc-kG--NDEIVHRLFEPLGYEIET 147 Maricaulis maris
WP_012190522  72 ---LSQYVNDRPYVASSLLCVAMGDVFSSAMAGICKKRPELVDLVLPLTVELPVVAv-rAkaGLSLIQRLFEPLGYQVSA 147 Herpetosiphon a...
WP_020907670  85 NfsLGEYVNDRPYAASSILSVALSKLFRTALTGTCKSHPELVGAELALTVSIPVVPc-gG--DAELPRRLFEPLGWDVTA 161 Rhodococcus ery...
WP_012084463  88 V--LGQYVNDRPYAASSLLAVAIGRAFSTALAGRCTARPELVDLRWPLQVRLPAVParsG--GPDLVRRLFEPLGWDVSA 163 Kineococcus rad...
WP_011926628  81 ---LDQYVNDRPYAASSFLSVALNKAFRTAMNGVSSARQELADSAIPLEAVVTPLPl-rG--GETVVRQLFEPLGWDVSL 154 Bradyrhizobium ...
WP_015802283  69 ---LTQYVNDRPYTSGSLMAVALGSVFRTAMNGRCDARPELAAEPLPLRVELPAVPh-------rLVERLFAPLGWRVDA 138 Actinosynnema m...
ZP_07030057  149 SSA--LLDERFPDWGTSPYVSLELSATVRLQDLLTHLYVLIPVLDNEKHYWVGDDEVEKLLKRGEGWLPSHPEKDLIVSR 226 Granulicella ma...
ZP_05479751  146 TVL--PLDPQFPQWGDSRYVDLRLTGELRLADALNHVYVLLPVLDNAKHYWVSEDEIDKLLRAGGDWLAGHPEKELITRR 223 Streptomyces sp...
WP_011318409 143 QGH--VLDEKFPDWGNSKYFTVELQHTIPLSDLLSHLYVLIPVLDDEKHYWVNEEEIEKLLRHGEGWLSQHPAREQITRR 220 Anabaena variab...
WP_012687745 172 RPV--RLDDAFPEWGDSRYVRLTLRGDIRLADALNHLYVLLPVLDDAKHYWVASDEVDKLIRAGGSWLAEHPERTLITRR 249 Rhodococcus opacus
WP_011642114 148 HTA--LLDEAYPDWGESPYRTVRLKATKRLADALTHLYVLIPVLDNAKHYWVGSDEVEKLIDKAGDWLQSHPERDLIANR 225 Maricaulis maris
WP_012190522 148 EPI--ANDNP-----ANSYLALKLTANLTVKQLLTHIYVLIPVLDNAKHYWIGNDEVSKLLRKGDGWLAQHPECELITTR 220 Herpetosiphon a...
WP_020907670 162 IPV--QLDPHLPTWGNSDFVSLTLTGEHTVQSALRHLYVLLPVLDDVKHYWVGPDEADKLIRVAGEWLASHPDSALIMSR 239 Rhodococcus ery...
WP_012084463 164 REL--PLDETVPGWGASRYVDLVLEGSARVADLLAQLYVLLPVLDDAQHYWVGEREVDKLVRRGGEWLATHPERDLVTAR 241 Kineococcus rad...
WP_011926628 155 TPIagPQGDT-----TSRYVRLTLRGTNRLSALLNHLYVLIPVMDDAKHYWVGDEEIDKLLKRGEGWLDAHPAKELIVRR 229 Bradyrhizobium ...
WP_015802283 139 EVL--PLGE---DLGDSRYARVVLTGELLLSQALRHLYVLLPVLDGDKHYHVDQDEAAKLLRAGEGWLPEHPDRELITRR 213 Actinosynnema m...
ZP_07030057  227 YLKRQGELTREALARLIAEDVAEPE-EQKe-qV--RDEEEQKVE-RPLGLHEQRMGAVLSVLRGVSAKRVLDLGCGEGKL 301 Granulicella ma...
ZP_05479751  224 YLAHRRALTTAALTRLAEVDDSEPE-EIDnalA--EPAVLEAAD-RPVPLAEQRRGTIMAVLRSLGARSVGDFGCGEGAL 299 Streptomyces sp...
WP_011318409 221 YLKRQYRLTRTALAQLAEEDHPDPD-SAE---E--THAEEEAAVeKPISLNQQRMNGVVAALKQSNARRVIDLGCGQGNL 294 Anabaena variab...
WP_012687745 250 YLRHQTALTRSAFERLAELGDDVAE-QLEppvD--EEPGNDTVA-AAPPLNVIRREAVLGALGELDARTVIDLGCGSGQL 325 Rhodococcus opacus
WP_011642114 226 YL-RKRQFAQDALTLLDEKFGIAED-ETE---EpeQAAGEEALE-KPMRLNDLRYEAVTAALLKTGARRVCDLGSGEGKL 299 Maricaulis maris
WP_012190522 221 YLRYQKSLTSAALEHLLQAVAPETTtQTE---L--DQEQVSEPT-ERQSLHTQRHNVIVQRLKASGAQRILDLGCGEGKL 294 Herpetosiphon a...
WP_020907670 240 YLARRRDLVESVVDRLI------PE-QAE--------AQIEAPR-PDPPLARLRVDAVLATLQRLHVRTIVDIGCGEGKL 303 Rhodococcus ery...
WP_012084463 242 YLKHRRDLVLDALDRLADVDEGGAG-PAT---T----PAGDGEE-QRVPLREHRRAAVLAVLRESGAARVADLGCGQGQL 312 Kineococcus rad...
WP_011926628 230 YLRHRGVLARAALARLAPETQDEAL-ETE---T--QSQSEETLE-APIRLNDLRLAAVVEALRDSGARTIADLGCGEGKL 302 Bradyrhizobium ...
WP_015802283 214 YLLNRRTLVEEVLSSLSSLAEA--E-EVE---P--EELDNALAP-PRVSLARQRRETVISVLREAGARSVVDLGCGGGAL 284 Actinosynnema m...
ZP_07030057  302 LRYLLADQQFEAILGMDVSWRSLEIAKDRLKLDQLPERQRARIELVQGSLMYRDQRLNGFEAAAVVEVIEHLDAPRLASF 381 Granulicella ma...
ZP_05479751  300 VRDLLAEKSVERIVAADVSARALQVAARKLRLERRSETERARLELLQSSLIYRDDRLAGLDAAVLMEVVEHVDPPRLEAL 379 Streptomyces sp...
WP_011318409 295 LKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAF 374 Anabaena variab...
WP_012687745 326 VSALLDDARFTEIAAADVSTRALSIAARRLQLDRMPERRRERLQLFQAALTYTDSRFAGYDAAVLMEVIEHIDPPRLTAL 405 Rhodococcus opacus
WP_011642114 300 LRRLMQEKSIEYVQGVEVSTPELEKSERKLKLERMSPSQRARIDIVRGSLVYEDERLNGFDAITLVEVIEHVDAERLDAL 379 Maricaulis maris
WP_012190522 295 LRELLKESQFSAVVGMDLSTRALAILQQRI--ERLPERQRQRLSLLHGSLLYRDARLKGFDAAAIVEVLEHLELGHLAAF 372 Herpetosiphon a...
WP_020907670 304 LEALMPHAQFDKLVGVDVSARELTRAQRRLKFTEMSDVQRERVSLMQSSATYRDARLKGFDAAVLMEVVEHVDTARLPAL 383 Rhodococcus ery...
WP_012084463 313 LAALAADARFTSIVGTDVSVRALQQASRRLRLDRAPDP--GRVQLFQSSLTYRDERLKGLDAAVLSEVVEHVDPPRLPAL 390 Kineococcus rad...
WP_011926628 303 LQLLLRERFAERLIGLDPAARELERAAKRLKLGAPGGPPEGRVTLLHGSLTYRDARWADADAAALVEVIEHLDPDRLPMV 382 Bradyrhizobium ...
WP_015802283 285 LRPLIAEPQFTRVLGVDVSAHALRVAARKLHLDTMGERQRARVELRQGALTYVDRGLTGFDAAVLMEVVEHVDPERLPAL 364 Actinosynnema m...
ZP_07030057  382 ERVLFEFARPSHAIITTPNSEYNTVFETLPAGQFRHRDHRFEWTRAEFEQWAGDVAARFGYTVRFQPIGPEAPALGAPTQ 461 Granulicella ma...
ZP_05479751  380 ERAVFEFAAPRAVIVTTPNREYNVRFASLPAGKLRHRDHRFEWTRAEFRAWADRVASGYGYGLRMLPVGSDDPEVGPATQ 459 Streptomyces sp...
WP_011318409 375 ERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQPIGEADPEVGSPTQ 454 Anabaena variab...
WP_012687745 406 EQVIFVTARPGHVIVTTPNSEYNVRYPDLV--GMRHRDHRFEWSRAEFRSWAGNVCQVHGYTADFRPVGDDDPEVGPPTQ 483 Rhodococcus opacus
WP_011642114 380 ERVVFAKARPGAVLVSTPNIEFNQTFENLEAGRLRHADHRFEWTRAEFEAWAQGVCERQGYEVAFEGIGEAHNEFGYPTQ 459 Maricaulis maris
WP_012190522 373 ERTVFGFARPKLVLVTTPNREYNQLFPSLPADQLRHRHHRFEWTRAEFAVWAERVAASYNYRVSIEPLGPEDPNHGAPSQ 452 Herpetosiphon a...
WP_020907670 384 VRSVFVDAEPQYVLLTTPNADYNVLYPALAAGEFRHPDHRFEFSRTQFDDWATETARVHGYCVEFEFIGAIDPVLGGPTQ 463 Rhodococcus ery...
WP_012084463 391 ERVVFGDAAPATVVVTTPNREYDVHYAQLFENGFRHADHRFEWTRAEFARWADGVCARFGYSVRLLGVGDADPQVGPPTQ 470 Kineococcus rad...
WP_011926628 383 ERVVFGAARPRVVIVTTPNADYNALFPSLPAGQFRHRDHRFEWTRAEFAAWAQRVCETFNCQVAFSGIGHHDETLGAPTQ 462 Bradyrhizobium ...
WP_015802283 365 EHAVFACARPGLVLVTTPNVEYNPLFETLPAGSLRHADHRFEWTRAQFREWAEGVAERTGYTTHYLPIGDEDPERGAPTQ 444 Actinosynnema m...
ZP_07030057  462 MAIFSL 467 Granulicella mallensis MP5ACTX8
ZP_05479751  460 LALFTK 465 Streptomyces sp. AA4
WP_011318409 455 MAVFIH 460 Anabaena variabilis
WP_012687745 484 MAVFTR 489 Rhodococcus opacus
WP_011642114 460 MAVFTR 465 Maricaulis maris
WP_012190522 453 LGVFED 458 Herpetosiphon aurantiacus
WP_020907670 464 MAIFTK 469 Rhodococcus erythropolis
WP_012084463 471 LAVFSR 476 Kineococcus radiotolerans
WP_011926628 463 MAVFTR 468 Bradyrhizobium sp. ORS 278
WP_015802283 445 AAVFTL 450 Actinosynnema mirum
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