Conserved Protein Domain Family
7tmA_OR5A1-like

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cd15417: 7tmA_OR5A1-like 
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320539
Aligned: 26 rows
Threshold Bit Score: 410.881
Created: 17-Jan-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q8NGJ0        28 ALLFVTFLGIYLTTLAWNLALIFLIRGDTHLHTPMYFFLSNLSFIDICYSSAVAPNMLTDFFwEQKTISFVGCAAQFFFF 107 human
XP_001506241  26 IFLFVLFLAIYLVTLTWNLGLTSLIKVSPSLHIPMYFFLRHLSFIDMCYSSSVIPKMLSDFFkEQKTISVLGCATQYFVF 105 platypus
XP_006032309  25 VTLFVLFLTIYFITVVGNLGMIFLIRSSPRLHTPMYYFLGNLAFVDFCFSTVVTPKMLADMFvERKAISYNGCVAQVFIL 104 Chinese alligator
XP_006034848  25 VTFFVLFLAIYIITLVGNLGMIILFRIDPQLHIPMYFLLSNLAFVDILYSTCITPKLLSDLIaERRAISYSACVSQLCIV 104 Chinese alligator
XP_005294998  25 ILLFMIFLVIYIITLLGNLGMITLVKIDPRLHTPMYYFLSNLAFVDLCYSTVVAPKMLVDLLaERKAISYTGCAAQICVF 104 western painted...
XP_006034849  25 VMLFMLFLGIYLTTMVGNLGIIFLIRADYQLHTPMYYFLGNLAFVDICYSTLITPKLMADLItKRKAISYAGCAVQVFTL 104 Chinese alligator
XP_005029413  11 LALFTAFLVVYLMTLLGNLGIIILIRTSPQLHSPMYYFLGNLALVDLLYSTVVTPKLLSDLV-RQKPLSYVGCVTQVFVF 89  mallard
XP_006032312  24 IPLFLLFLAIYLITMVANIGLIFLIRVDSRLHTPMYFFLHYLAFVDLCYSTVIAPKMLADFLtERKNISYIGCGVQVFLF 103 Chinese alligator
EMC90082      25 VTFFLMVLLVYLATILGNLGMIVLIMASPQLHSPMYYFLANLALIDVGSSTVITPKMLADFVsEEKVISYAGCVAQEFIY 104 rock pigeon
EOA94456      32 AALFLLFLLIYIVTILANLGMLALIAASPRLHTPMYYFLGNLAFVDLCSSTVITPKLLADFLsEKKLVTYAGCVAQVFIF 111 mallard
Feature 1        #  #                                            # #####                         
Q8NGJ0       108 VGMGLSECLLLTAMAYDRYAAISSPLLYPTIMtQGLCTRMVVGAYVGGFLSSLIQASSIFRLHFCGPNIINHFFCDLPPV 187 human
XP_001506241 106 SGLGLTECCLLAAMAYDRYAAICTPLLYTTVMsPSLCRKMVAAAYAGGFLSALTETGLIYRQDFCGPNVIHHFFCDLLPL 185 platypus
XP_006032309 105 CFFGVTECFLLATMAYDRYVAICRPLVYSIILsPRLCVQLVVGSYFAGWINAMSQTVDLLQLSFCGSHVIDLFFCDISPL 184 Chinese alligator
XP_006034848 105 SILLVMECFLLAVMAYDRYAAICNPLLYTVMS-PRLCGQLVAGSFFTGCMNAMIQAVGMLKMSFCGPMVIDLFFCDISSM 183 Chinese alligator
XP_005294998 105 CMLIVTECFLLAAMAYDRYVAICNPLLYRVVMcPRLCAQLMAGSFLAGCVNSMAQTTGMLTLTFCGSNVIDLFFCDISPL 184 western painted...
XP_006034849 105 CLFGVTECILLATMAYDRYVAICTPLVYSVIMsPRLCVQLVIGSFLAGWVNAVTQTAGMLQLTFCGSNVIDLFFCDISPL 184 Chinese alligator
XP_005029413  90 SIFLVTECFLLATMAYDRYMAVSHPLHYSVLMsPRLCVQLVGGSYLAGLLNGMGQTIGMLNLSFCGSVVVNLFFCDLSLL 169 mallard
XP_006032312 104 GVFVVTEGFLLATMAYDRYVAISSPLLYSVIMsPKLRVWLVIGSFLIGCVNGMTQTVNLLYLSFCGSKVIDHFFCDISPL 183 Chinese alligator
EMC90082     105 SILGMTEVFLLAVMAYDRYLAICRPLLYHSVMsPERCFQLVTGSYLVGLTNGIGQTVGMFTLSFCGSSVIDLYFCDISPL 184 rock pigeon
EOA94456     112 DILGVTECFLLAMMAYDRYMAICHPLLYSVTMsPKCCFQLVTCSYLLGLTNGVGQTIGMLRLSFCSSRVIDHFFCDISPL 191 mallard
Feature 1                  #  ### ### ##                                            #  ## ##  #  
Q8NGJ0       188 LALSCSDTfLSQVVNFLVVVTVGGTSFLQLLISYGYIVSAVLKIpSAEGRWKACNTCASHLMVVTLLFGTALFVYLRPss 267 human
XP_001506241 186 LALSCSDTsTTQVVVFVVGVVIGMMSVLVVFLSYGYITVAVLLIrSARGRYKTFTTCASHLITVILFYGSGFFVYMRLns 265 platypus
XP_006032309 185 LSLSTSDAsISQMVLLTTAAILGAFTILVVLISYTFIVATILKIhSTEGKHKAFSTCASHLTVVSIFYGTSLFMYLKSss 264 Chinese alligator
XP_006034848 184 ILLSCSDTrIHHVILLFVTFLFGVVSTLIVLISYIFIISTILKIrSAEGKCKAFSTCASHLTAVIIFYGTGLFIYLQPnt 263 Chinese alligator
XP_005294998 185 LSLANSDSsINHVVLLAVTYLTGVFSGLIVLISYVFILNAILRIrSAEGRFKAFSTCTSHLTAVTIFYGSGLFIYLQPst 264 western painted...
XP_006034849 185 LSLSNSDTtINHIVILVVTVVFGVFSILIVLISYIFILSTILRIhSTKGKCKAFSTCASHFMAVSVFYGTCLCIYLKSns 264 Chinese alligator
XP_005029413 170 ASLSSSDStLTSLIMTVPTFLFGVSSSLIVLVSYIAIVSTILSIrSAKGKCKAFSTCASHLTTVSIFYGNGLFVYLKPss 249 mallard
XP_006032312 184 ISLSESDStINQIILLASATLFGLSSGVIVLISYIFILSTILRIhSTEGKHKAFNTCTSHLTAVCILYGTALFVYLKPss 263 Chinese alligator
EMC90082     185 ISLSTSNT-TISLIILTSAALFAVSNSLFVLVSYMAIISTILSIhSAEGKRKAFSTCASHLTTVSIFYGAACFTYLKPss 263 rock pigeon
EOA94456     192 ISLSTSDTtLNQIMLRTLASLFGVSSGLVVLLSYIAIISTILSIrSAKGKCKAFSTCASHLAVVSIFYGTAIFMYLKA-- 269 mallard
Feature 1           ## ###  #  ##                       
Q8NGJ0       268 syLLGRDKVVSVFYSLVIPMLNPLIYSLRNKEIKDALWK 306 human
XP_001506241 266 sySESRDKVVSLFYTVVIPMLNPLIYSLRNREILDTLKR 304 platypus
XP_006032309 265 ddSQHEDKWTTVFYTVVTPMLNPLIYSLRNKDVKDAMRK 303 Chinese alligator
XP_006034848 264 knSRDQNKVVSVFYTVVTPMLNTLIYSLRNKEVKNAFNR 302 Chinese alligator
XP_005294998 265 kySRDQDKVVSVFYTVVTPMLNPLIYSLRNKEVKDALRR 303 western painted turtle
XP_006034849 265 nnSQAKDKVLSVFYTVVTPMLNPLIYSLRNKEVKDALRK 303 Chinese alligator
XP_005029413 250 lkSREEDKWVAVLYTVVTPMLNPLIYSLRNQEVKEALRR 288 mallard
XP_006032312 264 kdSKPEDKWAPVFYTVVTPMLNPLIYSLRNKEVKDALKR 302 Chinese alligator
EMC90082     264 -dSSRGDKWAVMLYTVLTPMLNPFIYSLRNKEVKEALRR 301 rock pigeon
EOA94456     270 --SSRDDKRAAVLYTVVTPMLNPLIYSLRNQEVKEALRR 306 mallard

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