Conserved Protein Domain Family
7tmA_NAGly_R_GPR18

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cd15166: 7tmA_NAGly_R_GPR18 
N-arachidonyl glycine receptor, GPR18, member of the class A family of seven-transmembrane G protein-coupled receptors
N-arachidonyl glycine (NAGly), an endogenous metabolite of the endocannabinoid anandamide, has been identified as an endogenous ligand of the G(i/o) protein-coupled receptor 18 (GPR18). NAGly is involved in directing microglial migration in the CNS through activation of GPR18. NAGly-GPR18 signaling is thought to play an important role in microglial-neuronal communication. Recent studies also show that GPR18 functions as the abnormal cannabidiol (Abn-CBD) receptor. Abn-CBD is a synthetic isomer of cannabidiol and is inactive at cannabinoid receptors (CB1 or CB2), but acts as a selective agonist at GPR18. The NAGly receptor is a member of the class A G protein-coupled receptor superfamily, which all have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. G-proteins regulate a variety of cellular functions including metabolic enzymes, ion channels, and transporters, among many others.
Statistics
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PSSM-Id: 320294
Aligned: 5 rows
Threshold Bit Score: 460.828
Created: 19-Nov-2008
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                               #  ##           ###### ##
Q4R613        23 IAALVFYSCIFIIGLFVNITALWVFSCTTKKrttVTIYMMNVALVDLIFIMTLPFRMFYYAkdeWPFGeyFCQILGALTV 102 crab-eating mac...
NP_877958     23 IAALVFYSCIFLIGLFVNVTALWVFSCTTKKrttVTIYMMNVALLDLVFILSLPFRMFYYAkgeWPFGeyFCHILGALVV 102 house mouse
EMP29755      22 IASLVFYSFIFIIGLLVNITALWVFSCTTKKrttITVYMMNVALLDLIFILSVPFRITYYAkkaWPFGdiFCRILGAFTV 101 green seaturtle
XP_005992365  24 IAALVFYSFIFAIGLIVNITALWVFSCTTKKrtsVTVYMMNVALVDLIFILMLPFRMVYYAkrsWPFGklFCSINAALTV 103 coelacanth
CAG07300       7 IAGLVFYCFVFTIGIVVNVTALWVFALTTKRrnsVTVYMINVAVVDLTFILLLPFRMVYQHtdhWPFGdvFCRINAALTI 86  spotted green p...
Feature 1          #                                            # #####                          
Q4R613       103 FYPSIALWLLAFISADRYMAIVQPKyAKELKNtCKAVLACVGVWIMTLTTTIPLLLLhkdpdkdstpATCLKISDivylk 182 crab-eating mac...
NP_877958    103 FYPSLALWLLAFISADRYMAIVQPKyAKELKNtGKAVLACGGVWVMTLTTTVPLLLLyedpdkasspATCLKISDithlk 182 house mouse
EMP29755     102 FYPSIALWLLAFISVDRYMAIVQPKhVKELRNtRKALLACIGIWIMTLASTSPLLFLysdpdkasnfTTCMKMLDiihlk 181 green seaturtle
XP_005992365 104 FYPCIALWLFAFISADRYMAIVQPKhAKELKNiSKAVLACIGIWIMTIACTAPLLFLnkepdeasnfTTCLKMLDiiylk 183 coelacanth
CAG07300      87 FYPCMALWLFAMISADRYMAIVQPKhSKELRNvPKAVLASVGVWIMTLGSTFPLLFFdedpdyvsnfTTCIKMQDimfmr 166 spotted green p...
Feature 1         #  ### ### ##                                                #  ## ##  #       
Q4R613       183 aVNVLNFTRLTFFFLIPLFIMIGCYLVIIHNLLHgrtsKLKPKVKEKSIRIIITLLVQVLVCFMPFHICFAFLmlgt-ge 261 crab-eating mac...
NP_877958    183 aVNVLNFTRLIFFFLIPLFIMIGCYVVIIHSLLRgqtsKLKPKVKEKSIRIIMTLLLQVLVCFVPFHICFAVLmlqg-qe 261 house mouse
EMP29755     182 eVNMLNFSRLIFFFLIPLFIMIGCYLVIIYHFVHgrtsKLKPKAKERSIKIIITLIVQVLVCFVPFHICFAFLmlqd-ed 260 green seaturtle
XP_005992365 184 eVNSINFARIMFFFLLPLFISIGCYSVIIQNLVHgrtsKLKPKVKEKSIKIIVTLIVQLLVCFVPFHICLVFLllqs-gq 262 coelacanth
CAG07300     167 hNNVVNFVRLIFFFLVPIFIMIGCYIVIVDNLIHgrtsKLKPKVKEKSIRIILTLITQVLVCFVPFHIFLVLGligndkd 246 spotted green p...
Feature 1          ## ###  #  ##                     
Q4R613       262 nsYSPWGAFTTFLMNLSTCLDVILYYIVSkQFQARV 297 crab-eating macaque
NP_877958    262 nsYSPWGAFTTFLMNLSTCLDVVLYYIVSkQFQARV 297 house mouse
EMP29755     261 qsYNPWAAFTTFLMNLSTCLDVILYYIVSkQFQARV 296 green seaturtle
XP_005992365 263 ndYNPWAAFTTFLMNLSTCLDVILYYIVSkQFQARV 298 coelacanth
CAG07300     247 dgYNTGAIVTTFLMNLSTVLDIILYYIVSkQFQDRV 282 spotted green pufferfish

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