1UTR,2UTG,1PUO,1PUO,1ZKR


Conserved Protein Domain Family
Secretoglobin

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cd00633: Secretoglobin 
Click on image for an interactive view with Cn3D
Secretoglobins are relatively small, secreted, disulphide-bridged dimeric proteins with encoding genes sharing substantial sequence similarity. Their family subunits may be grouped into five subfamilies, A-E. Uteroglobin (subfamily A), which is identical to Clara cell protein (CC10), forms a globular shaped homodimer with a large hydrophobic pocket located between the two dimers. The uteroglobin monomer structure is composed of four alpha helices that do not form a canonical four helix-bundle motif but rather a boomerang-shaped structure in which helices H1, H3, and H4 are able to bind a homodimeric partner. The hydrophobic pocket binds steroids, particularly progesterone, with high specificity. However, the true biological function of uteroglobin is poorly understood. In mammals, uteroglobin has immunosuppressive and anti-inflammatory properties through the inhibition of phospholipase A2. The other four main subfamilies of secretoglobins are found in heterodimeric combinations, with B and C subfamilies disulphide-bridged to the E and D subfamilies, respectively. [See review by Laukaitis C.M. & Karn R.C. (2005). Biological Journal of the Linnean Society 84, 493]. These include rat prostatic steroid-binding protein (PBP or prostatein), human mammaglobin (or heteroglobin), lipophilins, major cat allergen Fel dI, the hamster Harderian gland proteins and mouse salivary androgen-binding protein (ABP). Example of such a heterodimer: ABPalpha-like sequences are closely related to cat Fel dI chain 1, whereas ABPbeta-gamma-like sequences are closely related to Fel dI chain 2. Thus, the heterodimeric structure of ABPalpha-beta and ABPalpha-gamma is recapitulated by the sequence-similar Fel dI chains 1 and 2. This conservation of primary and quaternary structure indicates that the genome of the eutherian common ancestor of cats, rodents, and primates contained a similar gene pair.
Statistics
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PSSM-Id: 238346
Aligned: 54 rows
Threshold Bit Score: 54.997
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
HydrophobicDimer interface
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:Hydrophobic pocket - steroid binding site [chemical binding site]
Evidence:
  • Structure:IUTR: uteroglobin bound to 4,4'-bis([H]methylsulfonyl)-2,2',5,5'-tetrachlorobiphenyl; residue contacts determined at 3.5 Angstroms
  • Citation:PMID 7583672
  • Citation:PMID 1560460
  • Citation:PMID 7770456

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           #      #         #                #  #              #  ##         
1UTR_A        24 CpGFLQVLEALLLg--sESNYEAALKPFNPASDLQNAGTQLKRLVDTlpQETRINIVKLTEKIltsplC 90  Norway rat
XP_001002468   9 CiILDNVSKSTIDssvsKNDYLKLVSPDEHGPFIKNAMKQFKQCLLDqsKETLANVQEMMDAIfnsdsC 77  house mouse
2833243       22 CpLLENVISKTINpqvsKTEYKELLQEFIDDNATTNAIDELKECFLNqtDETLSNVEVFMQLIydsslC 90  human
O75556        22 CkLLEDMVEKTINsdisIPEYKELLQEFIDSDAAAEAMGKFKQCFLNqsHRTLKNFGLMMHTVydsiwC 90  human
AAG42805      22 CvILESVLDKTIDpsvsVEDYTTYLQKYILTDAAKVALEELKQCFLSqsNETLANVKVLEYAVfdslyC 90  rabbit
AAQ89094      22 CvLLESVVEKTIDpsvsVEEYKADLQRFIDTEQTEAAVEEFKECFLSqsNETLANFRVMVHTIydslyC 90  human
AAG42807      22 CqLLDDMVTKTLDsqisLTDYHNFFKNLSSGAAAEMAVKDFKQCFLMqsNETLNNIKVFLETVynspfC 90  rabbit
AAG42808      22 CpFVEKMVKTTLNsnvsTAEYIDVLKNYINDERTELAVVEFKNCFLSqsEETLRNVVEMMETIynsklC 90  rabbit
CAD60974      22 CsYLERVISDTSDssvtTDVYLASLQEYISSDDTTQAIKELRECFLKqsEETLENFSVFMQVTynsklC 90  pig
XP_851800    238 ClLLEEAINKAIDsqvsIDEYQNFLQPFTYGLETKEAIAELKQCFLQqsDETLSNFALMMVTMvspdvL 306 dog

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